Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 2.0e-60 235.7 129 100.0
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 3.0e-53 211.8 145 84.1
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 8.8e-45 183.7 144 75.0
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 5.7e-44 181.0 145 73.1
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 5.7e-44 181.0 145 71.0
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 1.3e-43 179.9 145 72.4
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 4.8e-43 177.9 143 73.4
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 6.3e-43 177.6 145 70.3
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 6.3e-43 177.6 145 71.7
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 3.1e-42 175.3 145 68.3
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 3.1e-42 175.3 145 70.3
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 7.0e-42 174.1 145 71.0
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 9.1e-42 173.7 142 71.8
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 1.6e-41 172.9 145 68.3
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 2.0e-41 172.6 145 68.3
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 4.5e-41 171.4 145 69.7
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 4.5e-41 171.4 143 71.3
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 5.9e-41 171.0 145 69.7
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 1.0e-40 170.2 144 70.8
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 1.0e-40 170.2 145 67.6
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 2.2e-40 169.1 144 70.8
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.2e-40 169.1 143 69.9
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 2.9e-40 168.7 145 69.0
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 3.8e-40 168.3 143 69.9
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 5.0e-40 167.9 144 70.8
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 6.5e-40 167.5 145 67.6
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 8.5e-40 167.2 145 69.7
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 1.5e-39 166.4 142 69.7
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 3.2e-39 165.2 145 68.3
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 3.2e-39 165.2 129 72.9
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 4.2e-39 164.9 142 65.5
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 7.2e-39 164.1 145 68.3
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 7.2e-39 164.1 145 66.9
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 9.4e-39 163.7 143 67.1
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 9.4e-39 163.7 143 67.1
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 1.2e-38 163.3 143 67.8
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 1.6e-38 162.9 142 66.2
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 2.1e-38 162.5 145 66.9
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.7e-38 162.2 158 63.9
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 2.7e-38 162.2 145 68.3
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 3.6e-38 161.8 142 65.5
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 6.1e-38 161.0 145 69.0
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 8.0e-38 160.6 142 68.3
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 8.0e-38 160.6 145 65.5
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 1.0e-37 160.2 145 66.9
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 1.0e-37 160.2 145 66.2
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.3e-37 159.1 143 67.1
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 4.0e-37 158.3 145 65.5
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 4.0e-37 158.3 143 67.1
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 6.8e-37 157.5 142 66.2
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 1.2e-36 156.8 145 64.1
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 2.6e-36 155.6 145 66.2
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 4.4e-36 154.8 141 63.1
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 7.5e-36 154.1 142 64.8
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 9.8e-36 153.7 142 64.8
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 9.8e-36 153.7 142 63.4
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 1.3e-35 153.3 145 64.8
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 1.3e-35 153.3 142 63.4
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 1.7e-35 152.9 142 62.7
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 3.7e-35 151.8 142 62.0
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 4.8e-35 151.4 145 63.4
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 6.3e-35 151.0 145 64.8
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 8.3e-35 150.6 145 62.8
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 8.3e-35 150.6 142 63.4
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 1.1e-34 150.2 143 63.6
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 1.8e-34 149.4 142 63.4
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 5.4e-34 147.9 145 64.8
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 5.4e-34 147.9 143 61.5
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 1.2e-33 146.7 145 61.4
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 2.0e-33 146.0 143 59.4
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 5.9e-33 144.4 145 60.7
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 7.7e-33 144.1 141 60.3
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 1.3e-32 143.3 145 62.1
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 1.3e-32 143.3 145 60.7
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 2.3e-32 142.5 145 63.4
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 3.2e-31 138.7 145 60.7
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 5.5e-31 137.9 145 61.4
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 5.5e-31 137.9 142 60.6
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 5.5e-31 137.9 145 60.0
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.1e-30 136.0 145 59.3
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 2.1e-30 136.0 145 59.3
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.3e-29 132.5 145 58.6
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 3.0e-29 132.1 145 57.2
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 3.0e-29 132.1 146 57.5
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 4.0e-29 131.7 146 52.7
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 4.0e-29 131.7 146 52.7
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 6.8e-29 131.0 145 57.2
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 8.8e-29 130.6 142 58.5
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 1.5e-28 129.8 145 56.6
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 2.0e-28 129.4 145 56.6
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 2.0e-28 129.4 145 56.6
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 2.0e-28 129.4 145 56.6
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 2.0e-28 129.4 145 56.6
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 2.0e-28 129.4 145 58.6
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 2.6e-28 129.0 145 55.9
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 4.4e-28 128.3 147 55.1
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 5.7e-28 127.9 137 59.9
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 1.7e-27 126.3 145 56.6
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 2.8e-27 125.6 145 55.9
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 2.8e-27 125.6 145 55.2
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 4.9e-27 124.8 145 53.8
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 6.3e-27 124.4 145 55.2
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 1.4e-26 123.2 145 55.9
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 1.4e-26 123.2 145 55.9
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 1.4e-26 123.2 145 55.9
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 1.4e-26 123.2 145 55.9
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 1.4e-26 123.2 145 55.9
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 1.4e-26 123.2 143 55.2
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 1.4e-26 123.2 145 55.2
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 2.4e-26 122.5 145 54.5
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 5.4e-26 121.3 143 54.5
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 5.4e-26 121.3 142 54.9
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 5.4e-26 121.3 145 55.9
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 1.2e-25 120.2 142 54.2
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 1.6e-25 119.8 143 53.8
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 7.8e-25 117.5 129 57.4
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 1.3e-24 116.7 142 54.2
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 1.7e-24 116.3 142 54.2
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.3e-24 115.9 129 58.1
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 2.9e-24 115.5 145 53.8
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.9e-23 112.8 105 62.9
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 2.5e-23 112.5 142 52.8
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 9.5e-23 110.5 145 49.7
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 9.5e-23 110.5 145 51.7
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 2.1e-22 109.4 145 51.0
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 8.0e-22 107.5 145 51.7
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 1.0e-21 107.1 143 51.7
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 1.8e-21 106.3 145 49.0
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 4.0e-21 105.1 145 51.7
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 5.2e-21 104.8 142 50.7
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 6.8e-21 104.4 145 48.3
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 6.8e-21 104.4 145 48.3
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 1.5e-20 103.2 145 50.3
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 4.4e-20 101.7 145 49.0
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 9.8e-20 100.5 145 46.9
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 6.4e-19 97.8 144 46.5
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 6.4e-19 97.8 145 50.3
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 1.4e-18 96.7 143 48.3
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.8e-18 96.3 145 45.5
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 2.4e-18 95.9 145 48.3
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 4.1e-18 95.1 98 55.1
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 9.2e-18 94.0 145 45.5
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 2.0e-17 92.8 145 44.8
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 2.7e-17 92.4 142 46.5
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 2.7e-17 92.4 142 46.5
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 2.7e-17 92.4 145 44.1
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 4.6e-17 91.7 146 44.5
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 4.6e-17 91.7 144 41.7
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 5.9e-17 91.3 145 43.4
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 6.6e-16 87.8 145 42.8
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 8.6e-16 87.4 143 44.8
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.1e-15 87.0 145 44.1
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 1.5e-15 86.7 145 44.1
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 8.0e-14 80.9 52 73.1
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 5.2e-13 78.2 52 73.1
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 6.8e-13 77.8 81 55.6
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 8.9e-13 77.4 52 73.1
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 1.1e-10 70.5 128 46.1
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 2.1e-06 56.2 127 39.4
Thecc.02G021100 Theobroma cacao HOM05D003925 ORTHO05D004832 2.1e-06 56.2 42 76.2


User provided reference genes

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