Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 1.6e-113 412.9 230 100.0
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 3.9e-112 408.3 230 99.1
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.5e-100 368.2 231 87.4
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.5e-100 368.2 231 87.4
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 7.7e-100 367.5 230 87.4
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.3e-99 366.7 230 88.3
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 2.5e-98 362.5 233 87.1
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.2e-97 360.1 230 87.4
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 1.6e-97 359.8 235 86.4
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 3.6e-97 358.6 230 85.7
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 6.7e-96 354.4 230 84.3
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 1.1e-95 353.6 230 84.3
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 1.5e-95 353.2 230 85.2
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 2.6e-95 352.4 231 87.4
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 5.7e-95 351.3 230 84.3
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 9.7e-95 350.5 230 84.8
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 2.8e-94 349.0 230 84.3
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 8.2e-94 347.4 230 84.3
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 8.2e-94 347.4 230 84.3
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 8.2e-94 347.4 246 78.5
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 8.2e-94 347.4 230 83.5
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 1.4e-93 346.7 231 85.7
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 2.4e-93 345.9 230 84.8
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 5.3e-93 344.7 231 82.7
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 7.0e-93 344.4 230 83.9
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 9.1e-93 344.0 243 81.5
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 9.1e-93 344.0 230 83.5
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 9.1e-93 344.0 232 85.3
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.2e-92 343.6 233 84.1
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 2.0e-92 342.8 231 82.3
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 2.6e-92 342.4 231 81.8
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 2.2e-91 339.3 231 82.3
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 2.2e-91 339.3 230 83.5
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 2.9e-91 339.0 232 82.3
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 2.9e-91 339.0 232 82.8
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.9e-91 339.0 232 84.1
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 2.9e-91 339.0 230 84.3
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 3.8e-91 338.6 231 84.0
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 5.0e-91 338.2 230 82.6
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 6.5e-91 337.8 231 84.4
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 6.5e-91 337.8 231 82.7
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 8.5e-91 337.4 231 82.7
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 1.1e-90 337.0 231 82.7
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 1.4e-90 336.7 231 81.0
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 1.9e-90 336.3 231 84.4
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 1.9e-90 336.3 232 81.0
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 1.9e-90 336.3 232 81.0
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 3.2e-90 335.5 232 81.0
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 4.2e-90 335.1 232 81.0
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 4.2e-90 335.1 232 81.0
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 4.2e-90 335.1 232 81.0
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 5.5e-90 334.7 234 82.9
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 9.4e-90 334.0 230 83.5
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 1.2e-89 333.6 230 81.3
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 1.2e-89 333.6 230 81.7
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 1.2e-89 333.6 232 81.0
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 1.2e-89 333.6 233 81.1
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 2.7e-89 332.4 230 77.0
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 3.6e-89 332.0 232 80.6
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.6e-89 332.0 234 82.5
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 3.6e-89 332.0 235 80.9
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 4.7e-89 331.6 231 81.8
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 4.7e-89 331.6 231 79.7
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.7e-89 331.6 234 81.6
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 6.1e-89 331.3 233 82.0
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 6.1e-89 331.3 233 82.0
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 6.1e-89 331.3 231 80.5
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 8.0e-89 330.9 233 79.8
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 8.0e-89 330.9 233 79.8
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 8.0e-89 330.9 230 80.4
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 1.4e-88 330.1 232 80.2
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 1.4e-88 330.1 232 80.2
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 1.4e-88 330.1 232 80.2
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 1.4e-88 330.1 231 82.7
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.8e-88 329.7 231 81.0
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 2.3e-88 329.3 230 80.4
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 3.9e-88 328.6 231 82.7
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 1.1e-87 327.0 232 79.7
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 1.1e-87 327.0 232 79.7
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 1.5e-87 326.6 231 81.0
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 3.3e-87 325.5 230 80.9
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 3.3e-87 325.5 231 81.0
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 3.3e-87 325.5 235 79.6
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 3.3e-87 325.5 232 79.3
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 4.4e-87 325.1 232 79.7
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 2.2e-86 322.8 230 80.0
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 2.8e-86 322.4 230 74.8
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.3e-85 318.2 233 79.8
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 5.3e-85 318.2 235 79.6
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 7.0e-85 317.8 233 74.7
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 9.1e-85 317.4 232 77.2
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 1.2e-84 317.0 230 78.3
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 2.0e-84 316.2 234 79.1
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 2.6e-84 315.8 230 72.6
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 4.5e-84 315.1 231 79.7
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 5.9e-84 314.7 233 77.7
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 2.9e-83 312.4 284 62.0
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 5.0e-83 311.6 251 69.7
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 1.5e-82 310.1 231 77.9
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 1.9e-82 309.7 233 79.4
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 7.2e-82 307.8 230 76.5
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 9.4e-82 307.4 230 76.5
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 2.7e-81 305.8 232 76.7
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 4.7e-81 305.1 230 76.1
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 6.1e-81 304.7 233 77.7
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 1.0e-80 303.9 230 72.2
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 1.8e-80 303.1 230 75.7
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 3.0e-80 302.4 231 77.5
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.0e-80 302.0 233 71.7
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.0e-80 302.0 230 77.4
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 6.7e-80 301.2 234 76.9
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 6.7e-80 301.2 234 76.9
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 6.7e-80 301.2 237 75.5
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 5.7e-79 298.1 233 70.8
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 1.3e-78 297.0 230 74.8
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 4.8e-78 295.0 226 77.0
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 3.1e-77 292.4 230 73.0
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 4.1e-77 292.0 234 72.6
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.3e-77 291.6 230 69.1
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 2.7e-76 289.3 230 67.8
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 7.7e-76 287.7 218 79.8
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 2.9e-75 285.8 232 73.3
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 3.8e-75 285.4 231 73.2
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 5.0e-75 285.0 233 73.4
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.6e-73 280.0 230 72.2
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 8.0e-73 277.7 230 71.3
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.0e-72 277.3 230 71.7
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 1.4e-72 276.9 232 71.1
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.2e-72 275.0 230 71.3
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.8e-72 274.2 230 70.9
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 4.4e-71 271.9 271 62.0
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 1.4e-69 266.9 232 70.3
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 1.6e-68 263.5 230 69.6
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.5e-68 261.9 233 70.0
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 1.1e-66 257.3 230 67.0
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 1.9e-66 256.5 230 67.4
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 8.0e-65 251.1 232 66.4
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 5.4e-61 238.4 187 77.5
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 1.5e-58 230.3 189 73.0
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.5e-58 229.6 187 74.9
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.6e-57 226.9 231 64.5
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 6.1e-57 224.9 161 82.0
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 8.3e-54 214.5 237 60.8
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 7.8e-52 208.0 254 52.0
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.5e-50 203.8 121 83.5
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 9.5e-50 201.1 122 83.6
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 2.1e-49 199.9 168 74.4
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.0e-47 193.4 121 79.3
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 2.7e-44 183.0 236 54.2
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 3.5e-44 182.6 242 51.2
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.3e-43 180.6 113 81.4
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.7e-43 180.3 113 80.5
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.9e-42 176.8 113 79.6
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 1.4e-40 170.6 123 75.6
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 1.8e-40 170.2 155 68.4
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 1.4e-37 160.6 91 90.1
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.6e-36 157.1 95 83.2
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 2.3e-35 153.3 138 69.6
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 5.6e-34 148.7 96 79.2
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 2.4e-32 143.3 75 93.3
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 9.9e-31 137.9 81 82.7
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 7.3e-26 121.7 88 71.6
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.8e-25 119.8 185 44.3
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 3.6e-25 119.4 77 80.5
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 1.1e-24 117.9 96 68.8
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 3.1e-24 116.3 230 39.6
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 9.0e-24 114.8 181 49.7
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 1.5e-23 114.0 98 63.3
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 8.4e-22 108.2 75 80.0
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 2.1e-20 103.6 227 37.4
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 9.9e-15 84.7 44 88.6
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 2.9e-14 83.2 57 68.4
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 2.4e-13 80.1 71 59.2
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 1.8e-11 73.9 122 40.2
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.5e-10 70.9 89 50.6
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.3e-10 69.3 94 52.1
Zm00001eb225910 Zea mays HOM05D003885 ORTHO05D444501 2.4e-08 63.5 49 69.4


User provided reference genes

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