Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 0.0e+00 1362.1 686 100.0
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 0.0e+00 1287.3 694 94.8
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 0.0e+00 1077.4 689 77.9
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 0.0e+00 1076.2 690 79.3
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 0.0e+00 1075.8 704 78.6
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 0.0e+00 1075.5 695 78.3
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 6.7e-309 1063.5 694 77.8
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 5.7e-308 1060.4 697 77.8
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 7.4e-308 1060.1 689 77.8
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 2.2e-307 1058.5 690 78.6
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.1e-306 1056.2 694 76.5
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.0e-304 1049.7 692 76.3
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 1.6e-302 1042.3 697 75.2
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 3.7e-299 1031.2 696 76.1
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 4.8e-299 1030.8 691 75.5
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 4.1e-298 1027.7 696 74.3
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 4.5e-297 1024.2 697 75.0
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 5.9e-297 1023.8 691 76.8
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 7.7e-297 1023.5 686 74.9
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 2.2e-296 1021.9 631 78.9
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.2e-296 1021.9 696 74.0
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.1e-295 1019.6 686 73.9
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 2.5e-295 1018.5 689 74.5
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 4.2e-295 1017.7 698 74.2
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 2.1e-294 1015.4 661 76.4
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 6.1e-294 1013.8 690 75.2
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 7.9e-294 1013.4 695 73.2
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-293 1012.3 695 73.7
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.3e-293 1011.9 696 73.6
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.3e-293 1011.9 690 73.8
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 2.2e-291 1005.4 689 72.7
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.2e-291 1005.4 696 74.0
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.1e-290 1001.1 690 73.2
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.2e-289 999.6 700 73.6
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.6e-289 999.2 693 75.6
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 7.7e-289 996.9 695 74.1
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 3.8e-288 994.6 690 73.6
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 6.5e-288 993.8 688 73.8
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 9.4e-287 989.9 700 73.3
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 9.4e-287 989.9 697 73.0
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 4.7e-286 987.6 688 71.7
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.8e-285 985.7 689 71.7
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 1.1e-284 983.0 693 72.0
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 1.5e-284 982.6 696 72.4
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 4.4e-284 981.1 698 70.1
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.7e-284 980.7 696 72.8
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 3.7e-283 978.0 699 72.0
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 3.7e-283 978.0 693 71.0
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.6e-281 972.6 704 71.4
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 4.5e-281 971.1 692 71.4
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 4.5e-281 971.1 694 72.0
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 5.9e-281 970.7 694 72.5
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.0e-280 969.9 692 71.8
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.7e-280 969.1 689 71.0
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.7e-280 969.1 694 72.6
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 3.8e-280 968.0 689 72.0
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 6.5e-280 967.2 629 73.8
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.1e-279 966.5 693 71.3
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.9e-279 965.7 680 70.7
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.0e-277 959.9 686 71.1
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.3e-277 958.7 686 71.0
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 5.2e-277 957.6 685 70.9
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 6.8e-277 957.2 686 70.8
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 8.8e-277 956.8 684 70.8
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.5e-276 956.1 705 68.8
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 2.6e-276 955.3 685 70.8
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 4.4e-276 954.5 692 70.1
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.7e-275 952.6 699 71.4
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 3.7e-275 951.4 699 71.0
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 7.0e-274 947.2 724 68.9
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 7.0e-274 947.2 706 71.0
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.9e-272 941.8 696 69.8
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 6.1e-270 934.1 683 71.3
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 8.0e-270 933.7 682 71.3
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 3.0e-269 931.8 629 72.7
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 3.4e-268 928.3 693 68.5
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 2.9e-264 915.2 688 68.6
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 8.6e-264 913.7 685 66.3
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 3.6e-262 908.3 684 66.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 5.7e-260 901.0 659 70.4
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 4.7e-254 881.3 567 79.0
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.0e-253 880.2 625 68.5
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 9.8e-252 873.6 813 59.3
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 2.0e-249 865.9 691 65.3
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 5.0e-248 861.3 567 76.0
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 8.6e-248 860.5 696 66.1
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.2e-246 856.7 572 76.7
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.4e-242 843.2 565 72.2
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 3.0e-240 835.5 687 63.8
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 5.8e-236 821.2 628 64.2
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.2e-234 815.5 816 54.8
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 6.6e-232 807.7 652 65.2
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.9e-231 806.2 482 83.4
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 8.4e-219 764.2 590 66.8
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 5.1e-200 701.8 615 57.7
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.3e-195 687.2 799 49.1
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 4.7e-169 599.0 429 68.5
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.8e-144 517.3 386 68.9
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 8.9e-144 515.0 470 56.4
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 6.8e-128 462.2 539 46.9
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 7.8e-116 422.2 359 63.2
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.0e-115 421.8 598 43.6
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 5.2e-112 409.5 279 71.3
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.0e-103 380.9 336 60.1
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.0e-103 380.9 336 60.1
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.6e-97 361.3 295 62.7
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.8e-88 331.3 579 37.3
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 2.3e-83 314.3 235 70.2
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.1e-82 312.0 282 57.1
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 9.7e-58 229.2 583 29.0
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.9e-54 217.6 220 52.7
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 1.5e-53 215.3 270 45.6
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.5e-42 178.7 180 50.6
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.8e-42 176.0 145 65.5
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 7.5e-34 149.8 142 55.6
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 3.7e-33 147.5 124 58.9
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 3.7e-09 67.8 123 36.6
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 9.2e-08 63.2 79 36.7


User provided reference genes

Program Settings