Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 2.6e-160 568.9 340 100.0
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 9.4e-38 161.8 209 56.0
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 1.6e-37 161.0 238 47.5
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 1.0e-36 158.3 212 56.6
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 1.5e-30 137.9 225 44.0
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 2.5e-30 137.1 251 42.6
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 3.3e-30 136.7 234 42.7
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 5.6e-30 136.0 227 45.8
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 7.2e-30 135.6 222 43.2
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 7.2e-30 135.6 224 48.2
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 6.1e-29 132.5 221 48.4
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 1.8e-28 131.0 215 45.6
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 4.0e-28 129.8 250 45.2
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 5.2e-28 129.4 218 46.8
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 7.5e-27 125.6 192 45.3
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 7.5e-27 125.6 239 41.8
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 2.9e-26 123.6 142 53.5
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 2.9e-26 123.6 171 46.8
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 8.3e-26 122.1 145 53.8
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 4.1e-25 119.8 193 44.6
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 5.4e-25 119.4 193 44.6
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.7e-23 114.4 146 50.7
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.7e-23 114.4 146 50.7
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 2.3e-23 114.0 218 42.2
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 6.6e-23 112.5 157 49.7
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 8.6e-23 112.1 227 41.0
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 2.5e-22 110.5 145 49.7
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 4.3e-22 109.8 144 57.6
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 9.5e-22 108.6 144 49.3
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 1.2e-21 108.2 199 42.2
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 3.6e-21 106.7 155 48.4
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 4.7e-21 106.3 208 40.9
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 1.0e-20 105.1 141 48.9
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 2.3e-20 104.0 121 53.7
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 4.0e-20 103.2 227 38.8
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 4.0e-20 103.2 165 47.3
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 6.8e-20 102.4 219 40.2
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 6.8e-20 102.4 113 54.0
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 8.9e-20 102.1 145 46.9
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 8.9e-20 102.1 145 46.9
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 8.9e-20 102.1 104 60.6
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.2e-19 101.7 98 57.1
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.5e-19 101.3 145 46.9
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.8e-19 99.4 145 47.6
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 7.5e-19 99.0 219 39.7
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 7.5e-19 99.0 82 68.3
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 1.7e-18 97.8 83 62.7
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 2.2e-18 97.4 82 67.1
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 3.7e-18 96.7 82 67.1
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 4.9e-18 96.3 230 35.2
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 6.4e-18 95.9 82 67.1
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 8.3e-18 95.5 85 63.5
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.4e-17 94.7 141 48.9
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.4e-17 94.0 158 45.6
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 3.2e-17 93.6 141 48.2
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 4.1e-17 93.2 252 34.1
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 5.4e-17 92.8 178 38.8
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 7.0e-17 92.4 96 52.1
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 7.0e-17 92.4 153 43.8
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 7.0e-17 92.4 97 59.8
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 9.2e-17 92.0 219 45.2
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 9.2e-17 92.0 162 43.8
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.2e-16 91.7 94 52.1
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 1.6e-16 91.3 201 37.8
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.6e-16 91.3 217 36.4
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 3.5e-16 90.1 83 62.7
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 7.8e-16 89.0 211 38.4
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.0e-15 88.6 226 37.2
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 1.0e-15 88.6 223 39.9
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 1.7e-15 87.8 231 36.8
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 5.0e-15 86.3 203 39.9
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 8.6e-15 85.5 222 36.9
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.1e-14 85.1 234 41.5
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 2.5e-14 84.0 145 44.1
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 5.6e-14 82.8 254 34.6
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 5.6e-14 82.8 254 34.6
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 1.6e-13 81.3 132 46.2
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.6e-13 81.3 191 35.1
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 2.1e-13 80.9 205 40.0
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.8e-13 80.5 110 47.3
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 8.1e-13 79.0 113 46.9
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 1.1e-12 78.6 183 41.5
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 1.1e-12 78.6 138 41.3
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 1.4e-12 78.2 211 34.1
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 1.8e-12 77.8 135 41.5
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 3.1e-12 77.0 117 43.6
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 3.1e-12 77.0 117 45.3
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 3.1e-12 77.0 117 43.6
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 3.1e-12 77.0 117 43.6
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 3.1e-12 77.0 117 45.3
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 4.0e-12 76.6 97 48.5
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 6.8e-12 75.9 138 43.5
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 8.9e-12 75.5 96 57.3
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 1.2e-11 75.1 158 38.6
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 2.0e-11 74.3 92 52.2
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 2.6e-11 73.9 140 35.7
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 3.4e-11 73.6 144 36.1
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 4.4e-11 73.2 136 42.6
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 3.7e-10 70.1 227 32.2
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.9e-10 69.7 80 47.5
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 6.4e-10 69.3 247 29.6
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 6.4e-10 69.3 110 39.1
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 8.3e-10 68.9 144 36.8
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.1e-09 68.6 94 43.6
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 3.2e-09 67.0 125 47.2
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 4.1e-09 66.6 155 40.6
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.6e-08 64.7 113 50.4
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.1e-08 64.3 109 41.3
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.6e-08 63.2 104 38.5
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 6.0e-08 62.8 244 29.1
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 3.9e-07 60.1 231 35.9
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.1e-07 59.7 86 41.9
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.6e-07 59.3 86 41.9


User provided reference genes

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