Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 3.3e-113 411.8 217 100.0
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 2.3e-106 389.0 217 96.3
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 1.4e-79 300.1 173 96.0
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.2e-73 280.4 173 84.4
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.5e-73 280.0 173 86.7
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 4.4e-73 278.5 173 84.4
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 7.5e-73 277.7 173 87.9
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 5.4e-71 271.6 173 83.8
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 7.1e-71 271.2 173 83.8
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.5e-70 268.9 173 84.4
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 4.6e-70 268.5 173 79.8
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 5.6e-68 261.5 171 84.2
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 6.2e-67 258.1 173 83.2
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.1e-66 257.3 212 61.3
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 2.3e-66 256.1 173 69.9
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 4.0e-66 255.4 173 82.7
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.4e-65 252.3 173 68.2
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 3.4e-65 252.3 167 72.5
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 4.4e-65 251.9 173 76.9
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 5.8e-65 251.5 163 72.4
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 5.8e-65 251.5 173 68.2
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 5.8e-65 251.5 173 68.2
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 5.8e-65 251.5 173 68.2
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 7.6e-65 251.1 173 76.9
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 9.9e-65 250.8 164 74.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 9.9e-65 250.8 164 71.3
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 9.9e-65 250.8 173 80.3
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 9.9e-65 250.8 173 74.0
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.3e-64 250.4 171 81.3
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.2e-64 249.6 173 69.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 2.2e-64 249.6 187 75.9
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 2.2e-64 249.6 171 75.4
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 2.9e-64 249.2 173 67.6
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 6.4e-64 248.1 164 70.1
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 6.4e-64 248.1 167 74.3
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.9e-63 246.5 173 73.4
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.9e-63 246.5 173 78.6
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 9.2e-63 244.2 170 67.6
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 9.2e-63 244.2 173 76.9
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 1.2e-62 243.8 170 80.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 2.1e-62 243.0 172 71.5
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 6.0e-62 241.5 165 80.0
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.3e-61 239.6 164 77.4
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.5e-60 236.9 163 79.1
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.5e-60 236.9 179 63.1
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 7.3e-60 234.6 173 78.6
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 9.6e-60 234.2 173 76.3
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 9.6e-60 234.2 172 79.1
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 1.6e-59 233.4 158 78.5
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 2.1e-59 233.0 167 73.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 8.1e-59 231.1 172 76.2
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 4.0e-58 228.8 167 67.1
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 8.9e-58 227.6 191 60.7
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.5e-57 226.9 173 69.9
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.0e-57 226.5 168 64.3
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 4.4e-57 225.3 163 66.9
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 9.9e-57 224.2 163 77.3
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.3e-56 223.8 173 64.7
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.7e-56 223.4 172 75.6
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.8e-56 222.2 173 61.8
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 3.8e-56 222.2 169 75.1
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 4.9e-56 221.9 164 76.2
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 2.4e-55 219.5 167 73.1
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 3.2e-55 219.2 167 76.0
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 4.2e-55 218.8 166 65.1
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.6e-54 216.9 162 78.4
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.6e-54 216.9 162 78.4
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.6e-54 216.9 165 73.3
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.6e-54 216.9 166 64.5
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 4.6e-54 215.3 154 81.2
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.0e-53 214.2 172 73.3
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.9e-53 212.2 172 73.3
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 8.7e-53 211.1 152 80.3
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 5.6e-52 208.4 173 70.5
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.3e-51 207.2 168 73.2
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 2.8e-51 206.1 195 66.7
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 4.8e-51 205.3 195 66.7
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.1e-50 204.1 218 50.9
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 3.1e-50 202.6 170 70.6
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.0e-50 202.2 154 77.9
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.2e-49 200.7 172 69.2
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.9e-48 196.1 154 76.6
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 8.4e-48 194.5 179 65.4
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.4e-47 193.7 172 58.7
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.4e-47 193.0 103 84.5
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 4.2e-47 192.2 166 65.7
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.6e-46 190.3 164 57.3
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.8e-45 186.8 173 66.5
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.0e-45 186.0 162 66.0
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 8.7e-45 184.5 98 85.7
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 2.5e-44 183.0 103 78.6
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.1e-43 179.9 135 80.0
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.1e-43 179.9 135 80.0
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.1e-42 177.6 172 55.8
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.1e-42 177.6 131 77.1
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 9.0e-42 174.5 172 53.5
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.7e-40 170.2 131 80.2
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 4.9e-40 168.7 116 68.1
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.1e-39 167.5 166 59.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.4e-39 166.4 167 53.3
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 5.5e-39 165.2 150 66.0
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 7.9e-38 161.4 132 72.7
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 5.6e-36 155.2 172 58.7
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 5.6e-36 155.2 89 78.7
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.4e-34 150.6 147 52.4
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 3.1e-34 149.4 129 67.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 3.4e-33 146.0 174 53.4
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 3.2e-31 139.4 100 77.0
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.7e-27 125.9 127 64.6
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 6.3e-27 125.2 162 56.2
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 1.6e-22 110.5 157 52.9
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 3.4e-17 92.8 46 87.0
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 7.2e-15 85.1 109 60.6
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.0e-13 81.3 43 79.1
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 5.1e-13 79.0 39 87.2
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 5.3e-10 68.9 46 60.9
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 5.5e-07 58.9 36 72.2


User provided reference genes

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