Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 2.5e-253 878.2 424 100.0
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.3e-213 744.6 376 94.7
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 2.0e-199 699.1 392 85.7
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 2.3e-195 685.6 394 84.5
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 1.1e-181 640.2 390 77.7
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 2.5e-181 639.0 390 77.4
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 2.1e-180 636.0 390 76.9
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 8.1e-180 634.0 390 78.5
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 2.4e-179 632.5 380 78.4
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 3.1e-179 632.1 385 78.7
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 2.6e-178 629.0 390 77.2
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 8.4e-177 624.0 385 76.6
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 1.9e-176 622.9 390 77.2
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 5.4e-176 621.3 390 76.4
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 5.4e-176 621.3 392 76.3
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 9.3e-176 620.5 390 76.9
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 2.1e-175 619.4 383 77.8
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 4.6e-175 618.2 386 75.6
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 3.0e-174 615.5 384 76.3
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 6.6e-174 614.4 386 76.7
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 2.1e-172 609.4 388 75.3
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 1.1e-171 607.1 386 75.9
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 5.3e-171 604.7 394 73.1
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 9.0e-171 604.0 393 73.3
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.2e-170 603.6 383 74.9
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 3.4e-170 602.1 386 74.1
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 4.5e-170 601.7 383 75.5
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 4.5e-170 601.7 387 74.7
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 5.8e-170 601.3 386 75.1
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 1.7e-169 599.7 388 73.7
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 3.2e-168 595.5 385 74.0
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 4.2e-168 595.1 384 73.7
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 9.3e-168 594.0 387 73.1
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 2.1e-167 592.8 381 73.8
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 2.7e-167 592.4 384 74.0
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 3.5e-167 592.0 394 73.1
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 1.3e-166 590.1 383 73.9
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 3.0e-166 589.0 388 72.2
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 6.7e-166 587.8 380 74.2
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.3e-164 583.6 381 74.0
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 1.3e-164 583.6 384 71.6
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.1e-164 582.8 394 72.6
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 2.1e-164 582.8 383 73.4
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 2.8e-164 582.4 382 70.7
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 4.8e-164 581.6 390 71.3
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 4.8e-164 581.6 394 72.6
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 8.1e-164 580.9 390 69.0
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.8e-163 579.7 388 70.1
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.4e-163 579.3 394 72.3
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 2.4e-163 579.3 388 70.4
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 1.2e-162 577.0 390 72.1
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 1.5e-162 576.6 386 72.3
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 2.0e-162 576.2 384 71.1
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 1.7e-161 573.2 424 67.2
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 2.9e-161 572.4 388 69.6
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 1.2e-159 567.0 372 72.6
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 1.0e-158 563.9 381 70.9
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 1.3e-158 563.5 380 70.8
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 5.1e-158 561.6 388 68.0
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 1.1e-157 560.5 376 69.9
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 4.3e-157 558.5 383 69.5
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 4.3e-157 558.5 391 70.6
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 5.6e-157 558.1 388 69.3
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 9.6e-157 557.4 372 72.0
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 9.6e-157 557.4 372 72.0
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 1.3e-156 557.0 399 69.9
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 3.7e-156 555.4 399 69.4
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 8.2e-156 554.3 380 69.5
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 3.1e-155 552.4 383 68.9
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 6.9e-155 551.2 380 68.9
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 1.5e-154 550.1 372 71.0
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 4.5e-154 548.5 389 68.4
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 7.6e-154 547.7 380 68.9
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 1.3e-153 547.0 373 71.3
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 1.7e-153 546.6 371 71.4
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 2.9e-153 545.8 373 70.0
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 3.2e-152 542.3 383 67.9
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 1.8e-150 536.6 387 65.9
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 8.7e-150 534.3 376 68.6
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 8.2e-148 527.7 403 66.0
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 1.8e-147 526.6 385 66.0
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 2.4e-147 526.2 387 64.1
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 2.4e-147 526.2 383 66.1
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 3.1e-147 525.8 385 65.7
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 2.6e-146 522.7 410 62.7
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 3.2e-144 515.8 415 63.4
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 7.2e-144 514.6 313 78.3
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 9.4e-144 514.2 388 64.4
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 2.1e-143 513.1 378 64.8
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 4.6e-143 511.9 388 64.7
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 1.4e-142 510.4 385 64.9
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.5e-141 506.9 344 69.5
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 3.8e-137 492.3 392 64.3
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 2.1e-135 486.5 459 54.2
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 3.7e-132 475.7 382 62.3
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 5.3e-131 471.9 383 59.0
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 4.2e-112 409.1 377 53.3
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 8.8e-110 401.4 313 61.3
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 6.8e-102 375.2 401 51.1
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 1.1e-99 367.9 224 76.3
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 4.1e-99 365.9 383 47.5
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 1.1e-96 357.8 387 47.8
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 1.4e-94 350.9 375 48.5
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 1.2e-90 337.8 383 46.2
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 1.5e-80 304.3 189 76.2
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 1.7e-76 290.8 524 35.7
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 3.2e-75 286.6 525 35.0
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.9e-72 277.3 201 67.2
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 7.6e-69 265.4 385 44.2
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 8.4e-60 235.3 404 36.9
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.6e-58 229.6 164 66.5
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 1.8e-49 201.1 397 35.3
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 1.9e-48 197.6 396 32.6
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 6.9e-46 189.1 410 32.9
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 3.5e-42 176.8 532 28.2
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 3.2e-35 153.7 100 76.0
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 1.9e-32 144.4 120 58.3
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 2.4e-30 137.5 96 65.6
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.3e-20 105.1 84 69.0
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 4.8e-15 86.7 86 54.7
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 2.4e-14 84.3 49 87.8
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 4.1e-14 83.6 104 50.0
SHI28556 Sapria himalayana HOM05D005873 ORTHO05D007582 1.9e-11 74.7 51 62.7
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 2.5e-11 74.3 46 80.4
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 7.2e-11 72.8 63 57.1
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 9.4e-11 72.4 45 73.3


User provided reference genes

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