Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 1.3e-302 1042.3 567 100.0
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 1.1e-235 820.1 567 79.7
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 4.2e-208 728.4 570 69.1
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 4.7e-207 724.9 568 71.7
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 2.4e-203 712.6 585 69.9
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 4.1e-203 711.8 577 71.2
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 4.5e-202 708.4 596 69.0
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 1.3e-201 706.8 568 70.8
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 3.8e-201 705.3 569 68.5
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 5.0e-201 704.9 588 69.7
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 1.1e-200 703.7 573 69.3
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 4.2e-200 701.8 577 70.9
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 5.5e-200 701.4 573 71.4
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 7.2e-200 701.0 569 72.9
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 3.6e-199 698.7 583 69.6
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 8.0e-199 697.6 557 70.2
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.2e-197 693.7 588 68.7
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 5.7e-197 691.4 590 68.3
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 1.3e-196 690.3 570 69.3
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 4.8e-196 688.3 574 70.0
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.8e-195 686.4 573 70.3
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.4e-195 686.0 569 67.5
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 2.4e-195 686.0 569 67.8
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 5.3e-195 684.9 569 72.1
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 1.2e-194 683.7 573 70.0
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 1.6e-194 683.3 573 70.0
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 2.0e-194 682.9 571 67.3
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 2.7e-194 682.6 574 70.0
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 4.5e-194 681.8 571 70.9
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 5.9e-194 681.4 571 69.9
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 1.0e-193 680.6 582 66.7
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 1.3e-193 680.2 580 66.9
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.7e-193 679.9 561 70.1
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 6.5e-193 677.9 571 70.8
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 1.9e-192 676.4 566 67.0
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 9.4e-192 674.1 576 67.2
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 1.0e-190 670.6 570 66.3
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 1.8e-190 669.8 576 66.7
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 5.2e-190 668.3 577 69.7
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 5.2e-190 668.3 586 67.9
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 8.8e-190 667.5 574 68.5
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 8.8e-190 667.5 576 64.9
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 1.5e-189 666.8 568 65.8
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 2.0e-189 666.4 576 65.1
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 3.4e-189 665.6 576 66.3
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 3.4e-189 665.6 561 67.7
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 1.7e-188 663.3 579 67.7
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 3.1e-187 659.1 565 65.0
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 5.9e-186 654.8 580 63.6
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 5.9e-186 654.8 576 65.3
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 2.3e-185 652.9 573 67.7
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 2.8e-183 646.0 577 64.5
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 4.7e-183 645.2 561 65.1
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 8.0e-183 644.4 575 65.2
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 5.2e-182 641.7 574 63.6
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 8.9e-182 641.0 573 66.1
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 6.3e-180 634.8 566 64.3
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 8.3e-180 634.4 575 64.3
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 1.6e-178 630.2 573 61.3
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 2.0e-178 629.8 566 66.1
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 5.9e-178 628.2 558 65.6
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 1.7e-177 626.7 576 60.9
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 2.9e-177 625.9 558 63.6
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 3.9e-177 625.5 578 60.6
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 1.1e-176 624.0 582 59.8
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.9e-176 623.2 512 67.6
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 3.3e-176 622.5 579 60.6
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 4.3e-176 622.1 582 59.8
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 5.6e-176 621.7 576 60.1
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 7.3e-176 621.3 581 59.9
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 2.1e-175 619.8 581 63.0
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 1.0e-174 617.5 547 63.1
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 1.8e-174 616.7 577 59.8
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 2.3e-174 616.3 559 63.5
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 4.0e-174 615.5 566 63.4
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 1.2e-173 614.0 592 60.5
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 7.0e-171 604.7 582 58.9
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 2.3e-166 589.7 556 59.9
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 1.2e-165 587.4 568 56.7
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 3.4e-165 585.9 498 65.7
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 7.5e-165 584.7 562 62.3
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 6.4e-164 581.6 561 57.4
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 2.4e-163 579.7 581 60.1
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 2.7e-162 576.2 568 64.3
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 1.1e-160 570.9 572 55.6
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 7.3e-160 568.2 576 55.0
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 1.6e-159 567.0 560 57.7
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 2.3e-158 563.1 567 61.6
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 2.0e-157 560.1 567 57.5
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 2.4e-150 536.6 464 65.3
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 2.3e-145 520.0 462 63.4
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 9.0e-134 481.5 474 57.2
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 9.0e-134 481.5 474 57.2
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 6.2e-127 458.8 561 52.0
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 1.3e-124 451.1 393 66.9
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 1.0e-105 388.3 565 44.2
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 1.0e-105 388.3 570 42.6
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 4.2e-99 366.3 313 67.7
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 4.4e-96 356.3 560 41.6
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 5.0e-92 342.8 564 40.8
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 2.1e-90 337.4 229 75.1
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 5.2e-81 306.2 215 74.4
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 8.8e-81 305.4 557 36.4
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 8.5e-76 288.9 559 36.5
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 2.0e-61 241.1 177 70.1
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 3.9e-60 236.9 176 70.5
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 7.5e-48 196.1 168 64.3
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.3e-43 180.6 145 62.8
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 7.3e-43 179.5 129 71.3
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 1.8e-41 174.9 102 88.2
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 2.3e-41 174.5 104 86.5
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 3.3e-35 154.1 232 42.7
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 8.7e-20 102.8 87 62.1
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.3e-18 99.0 108 53.7
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 6.2e-18 96.7 193 36.3
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 2.0e-16 91.7 57 78.9
Actinidia39976 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.9e-15 87.8 59 79.7
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 4.2e-14 84.0 93 51.6
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.6e-13 82.0 57 73.7
BolC1t05755H Brassica oleracea HOM05D002281 ORTHO05D006774 7.9e-13 79.7 49 81.6
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.3e-12 79.0 88 51.1
BraA01t04528Z Brassica rapa HOM05D002281 ORTHO05D006774 5.3e-09 67.0 49 73.5
BolC1t05758H Brassica oleracea HOM05D002281 ORTHO05D006774 5.8e-08 63.5 42 76.2


User provided reference genes

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