Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-101 373.2 179 100.0
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-79 297.7 171 86.0
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-79 297.7 171 86.0
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-79 297.7 171 86.0
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-79 297.7 171 86.0
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-79 297.7 171 86.0
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-79 297.7 171 86.0
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 9.3e-77 290.4 176 79.5
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 9.3e-77 290.4 176 79.5
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 2.3e-75 285.8 170 81.8
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 3.9e-75 285.0 170 81.2
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 2.5e-74 282.3 170 80.6
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 4.3e-74 281.6 162 83.3
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 4.3e-74 281.6 170 80.0
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.3e-74 281.6 170 80.0
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.3e-74 281.6 170 80.0
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 7.3e-74 280.8 171 79.5
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 2.4e-72 275.8 170 78.8
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.1e-72 275.4 170 80.0
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 9.0e-72 273.9 170 77.1
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 1.2e-71 273.5 171 77.8
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 2.0e-71 272.7 162 80.9
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 3.4e-71 271.9 170 77.6
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 4.5e-71 271.6 170 77.1
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 5.8e-71 271.2 170 77.6
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 1.7e-70 269.6 170 77.1
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 4.9e-70 268.1 170 75.9
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 3.5e-68 261.9 162 77.8
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 3.5e-68 261.9 170 74.7
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 1.0e-67 260.4 170 74.1
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 3.9e-67 258.5 170 74.7
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 1.5e-66 256.5 170 74.1
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 1.5e-66 256.5 170 74.1
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 1.5e-66 256.5 170 74.1
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 1.5e-66 256.5 170 74.1
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 1.5e-66 256.5 170 74.1
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 3.3e-66 255.4 170 73.5
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 5.6e-66 254.6 167 74.9
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 9.6e-66 253.8 170 73.5
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 9.6e-66 253.8 170 73.5
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 9.6e-66 253.8 170 73.5
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 1.2e-63 246.9 155 78.7
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 4.9e-62 241.5 155 74.8
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 9.3e-61 237.3 149 76.5
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.6e-60 236.5 162 72.8
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.8e-59 233.0 162 72.2
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 9.6e-58 227.3 116 94.0
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 2.1e-57 226.1 170 64.7
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 2.8e-57 225.7 160 73.8
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.7e-57 225.3 162 70.4
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.7e-57 225.3 162 70.4
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.4e-56 223.4 127 84.3
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.8e-56 223.0 146 74.0
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 3.1e-56 222.2 127 83.5
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 6.9e-56 221.1 170 66.5
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 5.8e-55 218.0 119 84.9
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 7.6e-55 217.6 153 73.2
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.0e-54 217.2 162 68.5
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-50 201.4 119 82.4
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-50 201.4 119 82.4
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 5.7e-50 201.4 119 82.4
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 1.3e-49 200.3 171 60.2
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 1.3e-49 200.3 129 74.4
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 2.8e-49 199.1 162 64.8
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.7e-49 198.7 153 64.7
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 1.8e-48 196.4 111 84.7
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 2.2e-46 189.5 119 79.0
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 3.8e-46 188.7 121 73.6
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.1e-45 187.2 150 64.0
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 1.4e-45 186.8 121 72.7
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 4.2e-45 185.3 119 73.9
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 7.2e-45 184.5 111 77.5
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.2e-44 183.7 162 58.6
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 3.6e-44 182.2 111 76.6
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.1e-44 181.4 169 59.8
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.4e-43 180.3 119 73.1
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 5.1e-43 178.3 119 70.6
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-42 176.8 119 75.6
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.3e-42 175.6 92 90.2
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 2.2e-41 172.9 115 74.8
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 6.3e-41 171.4 85 96.5
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 8.2e-41 171.0 119 69.7
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 8.2e-41 171.0 119 69.7
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 4.1e-40 168.7 119 68.9
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.2e-39 167.2 148 60.1
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 2.0e-39 166.4 107 72.0
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.7e-38 163.3 94 77.7
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 3.8e-38 162.2 162 46.3
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 6.5e-38 161.4 115 67.8
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 1.9e-37 159.8 98 79.6
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 5.5e-37 158.3 108 75.0
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 7.2e-37 157.9 172 51.2
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 2.3e-35 152.9 126 59.5
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 6.7e-35 151.4 96 76.0
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 6.7e-35 151.4 114 61.4
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.7e-35 151.4 118 59.3
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 1.5e-34 150.2 122 64.8
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 5.7e-34 148.3 89 80.9
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 5.7e-34 148.3 89 80.9
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 7.4e-34 147.9 102 71.6
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 7.4e-34 147.9 88 80.7
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.7e-33 146.7 112 60.7
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.2e-33 146.4 89 76.4
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 3.7e-33 145.6 146 51.4
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 3.7e-33 145.6 95 74.7
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 8.2e-33 144.4 80 86.2
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 8.2e-33 144.4 178 48.9
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.4e-32 143.7 97 70.1
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.4e-32 143.7 97 70.1
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 1.2e-31 140.6 114 64.9
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 1.5e-31 140.2 162 48.8
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 2.6e-31 139.4 101 67.3
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 2.6e-31 139.4 88 76.1
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 4.5e-31 138.7 114 63.2
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 5.9e-31 138.3 88 76.1
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 5.9e-31 138.3 99 65.7
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 7.7e-31 137.9 119 63.0
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 7.7e-31 137.9 95 70.5
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 2.9e-30 136.0 89 70.8
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 2.9e-30 136.0 122 59.0
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 3.8e-30 135.6 114 62.3
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 3.8e-30 135.6 181 46.4
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 8.5e-30 134.4 137 51.1
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.5e-30 134.4 94 68.1
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.5e-29 133.7 88 70.5
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 1.9e-29 133.3 170 47.1
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 5.5e-29 131.7 97 63.9
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 5.5e-29 131.7 89 68.5
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-29 131.7 70 84.3
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-29 131.7 70 84.3
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-29 131.7 70 84.3
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-29 131.7 70 84.3
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 5.5e-29 131.7 70 84.3
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 7.2e-29 131.3 88 69.3
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-28 130.2 69 84.1
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-28 130.2 69 84.1
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-28 130.2 69 84.1
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-28 130.2 69 84.1
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-28 130.2 69 84.1
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.1e-28 129.8 70 82.9
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 2.1e-28 129.8 172 47.1
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 3.6e-28 129.0 111 60.4
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 7.4e-26 121.3 86 67.4
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.1e-24 117.5 85 64.7
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.1e-24 117.5 144 50.7
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 5.3e-24 115.2 171 43.9
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.0e-24 114.8 87 64.4
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.9e-23 111.7 123 49.6
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.7e-22 110.2 123 49.6
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.2e-22 109.8 70 68.6
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.5e-21 107.1 82 64.6
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 1.9e-21 106.7 62 79.0
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-20 103.6 60 81.7
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 2.7e-20 102.8 72 66.7
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 8.0e-20 101.3 80 60.0
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.8e-19 100.1 158 44.9
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 2.4e-16 89.7 104 48.1
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 5.4e-16 88.6 97 49.5
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 9.1e-16 87.8 118 46.6
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 4.5e-15 85.5 45 82.2
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 1.2e-12 77.4 46 80.4
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 1.6e-12 77.0 55 70.9
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 2.7e-12 76.3 46 80.4
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 3.6e-12 75.9 76 55.3
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 1.8e-11 73.6 48 77.1
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-10 70.5 33 90.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-10 70.5 33 90.9
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 2.6e-10 69.7 63 57.1
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.4e-10 69.3 75 49.3
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 7.5e-10 68.2 55 58.2
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 6.3e-09 65.1 53 62.3
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 6.3e-09 65.1 32 87.5
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 2.7e-07 59.7 52 59.6
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 1.0e-06 57.8 63 47.6
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 1.0e-06 57.8 28 92.9
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 1.7e-06 57.0 36 72.2
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 8.6e-06 54.7 46 60.9


User provided reference genes

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