Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0510321 Helianthus annuus HOM05D000104 ORTHO05D004363 4.6e-129 464.5 228 100.0
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 2.7e-81 305.8 178 91.0
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 4.2e-50 202.2 173 65.3
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 1.9e-42 176.8 146 65.8
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 6.1e-41 171.8 156 60.3
Dinv09442 Davidia involucrata HOM05D000104 ORTHO05D004363 2.3e-40 169.9 152 61.8
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 6.3e-38 161.8 157 58.6
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 8.3e-38 161.4 157 58.6
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 1.8e-37 160.2 156 56.4
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 5.4e-37 158.7 156 57.1
Nitab4.5_0023622g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 5.9e-36 155.2 178 53.4
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 5.9e-36 155.2 149 55.7
Cpa.g.sc73.37 Carica papaya HOM05D000104 ORTHO05D004363 1.0e-35 154.5 152 58.6
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 1.3e-35 154.1 175 51.4
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 2.9e-35 152.9 181 49.2
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 3.8e-35 152.5 156 55.8
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 5.0e-35 152.1 156 56.4
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 6.6e-35 151.8 156 53.8
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 8.6e-35 151.4 153 56.2
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 1.5e-34 150.6 156 55.1
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 1.5e-34 150.6 180 52.2
Peaxi162Scf00213g01732 Petunia axillaris HOM05D000104 ORTHO05D004363 1.9e-34 150.2 156 56.4
CAN.G195.24 Capsicum annuum HOM05D000104 ORTHO05D004363 4.2e-34 149.1 178 52.2
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 5.5e-34 148.7 176 51.1
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 7.2e-34 148.3 156 54.5
Solyc08g074520.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 1.2e-33 147.5 180 52.2
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 2.1e-33 146.7 180 47.2
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 3.6e-33 146.0 146 57.5
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 8.0e-33 144.8 173 49.7
vmacro00211 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 8.0e-33 144.8 151 51.7
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 2.3e-32 143.3 156 53.2
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 3.0e-32 142.9 156 53.2
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 3.0e-32 142.9 156 52.6
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 3.0e-32 142.9 171 50.9
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 6.8e-32 141.7 171 50.9
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 6.8e-32 141.7 156 52.6
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 8.9e-32 141.4 175 49.7
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 1.2e-31 141.0 149 54.4
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 1.5e-31 140.6 153 52.3
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 1.5e-31 140.6 145 54.5
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 2.0e-31 140.2 171 50.3
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 3.4e-31 139.4 171 49.7
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 5.7e-31 138.7 156 51.9
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 7.5e-31 138.3 153 54.9
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 7.5e-31 138.3 145 55.2
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 1.3e-30 137.5 178 48.9
Oeu026040.2 Olea europaea HOM05D000104 ORTHO05D004363 2.2e-30 136.7 175 48.0
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 2.9e-30 136.3 151 51.7
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 4.9e-30 135.6 184 50.0
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 4.9e-30 135.6 116 59.5
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 8.3e-30 134.8 147 51.0
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 1.1e-29 134.4 107 66.4
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 1.8e-29 133.7 147 50.3
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 2.4e-29 133.3 183 49.2
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 4.1e-29 132.5 184 49.5
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 5.4e-29 132.1 175 49.7
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 7.0e-29 131.7 147 49.0
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 7.0e-29 131.7 186 47.3
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 7.0e-29 131.7 155 49.0
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 1.2e-28 131.0 186 45.2
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 1.2e-28 131.0 156 51.3
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 1.6e-28 130.6 139 52.5
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 1.6e-28 130.6 176 47.2
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 1.6e-28 130.6 148 52.0
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 2.7e-28 129.8 150 51.3
BolC4t25391H Brassica oleracea HOM05D000104 ORTHO05D004363 3.5e-28 129.4 152 49.3
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 3.5e-28 129.4 176 48.3
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 7.8e-28 128.3 157 49.0
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 7.8e-28 128.3 157 49.0
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 1.0e-27 127.9 149 51.7
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 1.3e-27 127.5 157 49.0
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 1.3e-27 127.5 157 49.0
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 1.7e-27 127.1 149 51.0
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 2.3e-27 126.7 157 46.5
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 2.3e-27 126.7 159 49.7
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 3.9e-27 125.9 101 65.3
BcaC02g09076 Brassica carinata HOM05D000104 ORTHO05D004363 6.6e-27 125.2 146 50.7
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 6.6e-27 125.2 148 52.0
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 1.1e-26 124.4 87 75.9
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 1.5e-26 124.0 107 58.9
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 1.9e-26 123.6 100 65.0
CARHR164200 Cardamine hirsuta HOM05D000104 ORTHO05D004363 2.5e-26 123.2 147 46.9
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 3.3e-26 122.9 157 50.3
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 4.3e-26 122.5 181 46.4
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 5.6e-26 122.1 184 46.2
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 7.3e-26 121.7 142 50.7
CsaV3_3G021040 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.2e-25 120.9 180 47.2
CsaV3_4G017740 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.2e-25 120.9 180 47.2
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 1.6e-25 120.6 107 59.8
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 2.8e-25 119.8 176 44.3
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 4.0e-24 115.9 139 49.6
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 6.8e-24 115.2 146 47.9
unitig_92.g28135 Utricularia gibba HOM05D000104 ORTHO05D004363 8.9e-24 114.8 102 58.8
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 6.4e-22 108.6 79 73.4
C04p38160 Brassica napus HOM05D000104 ORTHO05D004363 8.3e-22 108.2 135 48.9
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 8.3e-22 108.2 115 53.0
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 8.3e-22 108.2 164 42.7
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 3.2e-21 106.3 103 54.4
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 3.2e-21 106.3 78 71.8
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 3.0e-19 99.8 84 59.5
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 3.1e-16 89.7 72 63.9
Nitab4.5_0002482g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 3.4e-15 86.3 63 69.8
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 2.9e-14 83.2 97 51.5
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 1.1e-13 81.3 50 80.0
AagrBONN_evm.TU.Sc2ySwM_228.4034 Anthoceros agrestis HOM05D000104 ORTHO05D004363 1.6e-12 77.4 85 47.1
unitig_93.g30711 Utricularia gibba HOM05D000104 ORTHO05D004363 7.8e-12 75.1 47 74.5
QL10p058187 Quercus lobata HOM05D000104 ORTHO05D004363 1.9e-10 70.5 42 78.6
QL09p045741 Quercus lobata HOM05D000104 ORTHO05D004363 3.4e-07 59.7 101 38.6
MCO02G056 Micromonas commoda HOM05D000104 ORTHO05D004363 4.4e-07 59.3 68 50.0


User provided reference genes

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