Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-41 172.9 93 100.0
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 8.1e-32 140.2 84 89.3
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.5e-30 136.0 87 82.8
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 2.6e-30 135.2 87 82.8
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.4e-30 134.8 89 82.0
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 4.4e-30 134.4 87 82.8
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 4.4e-30 134.4 86 81.4
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 4.4e-30 134.4 87 82.8
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 4.4e-30 134.4 87 82.8
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 4.4e-30 134.4 91 75.8
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 5.8e-30 134.0 83 84.3
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 5.8e-30 134.0 87 79.3
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 7.5e-30 133.7 87 81.6
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 7.5e-30 133.7 87 81.6
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 9.8e-30 133.3 87 79.3
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 9.8e-30 133.3 83 84.3
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 9.8e-30 133.3 83 84.3
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 9.8e-30 133.3 87 81.6
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 9.8e-30 133.3 87 82.8
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 9.8e-30 133.3 87 81.6
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 9.8e-30 133.3 87 81.6
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 9.8e-30 133.3 87 81.6
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.3e-29 132.9 89 80.9
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 1.3e-29 132.9 89 80.9
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.3e-29 132.9 87 80.5
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.3e-29 132.9 87 81.6
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.3e-29 132.9 87 80.5
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 1.3e-29 132.9 83 85.5
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 1.7e-29 132.5 87 81.6
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.7e-29 132.5 87 81.6
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 1.7e-29 132.5 87 79.3
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.7e-29 132.5 83 83.1
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 2.2e-29 132.1 87 80.5
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.2e-29 132.1 87 81.6
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 2.2e-29 132.1 87 80.5
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.2e-29 132.1 87 80.5
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 2.2e-29 132.1 82 84.1
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 2.9e-29 131.7 83 85.5
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.9e-29 131.7 83 85.5
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.9e-29 131.7 89 80.9
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.9e-29 131.7 87 79.3
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.9e-29 131.7 87 79.3
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.9e-29 131.7 87 79.3
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 2.9e-29 131.7 87 79.3
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 2.9e-29 131.7 83 81.9
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.9e-29 131.7 87 81.6
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 3.7e-29 131.3 83 85.5
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 3.7e-29 131.3 83 85.5
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 3.7e-29 131.3 83 85.5
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.7e-29 131.3 83 81.9
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.7e-29 131.3 83 81.9
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 3.7e-29 131.3 87 79.3
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 3.7e-29 131.3 87 79.3
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 4.9e-29 131.0 87 80.5
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 4.9e-29 131.0 87 80.5
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.9e-29 131.0 87 79.3
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 4.9e-29 131.0 87 77.0
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 4.9e-29 131.0 87 80.5
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 6.4e-29 130.6 83 81.9
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 6.4e-29 130.6 83 81.9
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 6.4e-29 130.6 87 79.3
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 6.4e-29 130.6 87 79.3
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 8.3e-29 130.2 87 80.5
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 8.3e-29 130.2 83 84.3
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 8.3e-29 130.2 83 80.7
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 8.3e-29 130.2 83 80.7
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 8.3e-29 130.2 83 84.3
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 1.1e-28 129.8 90 77.8
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.1e-28 129.8 81 84.0
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-28 129.8 87 80.5
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.1e-28 129.8 87 79.3
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.4e-28 129.4 84 78.6
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.4e-28 129.4 83 79.5
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.4e-28 129.4 83 79.5
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.4e-28 129.4 87 78.2
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.4e-28 129.4 83 79.5
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.9e-28 129.0 89 76.4
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.9e-28 129.0 83 80.7
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.9e-28 129.0 87 80.5
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 1.9e-28 129.0 87 77.0
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.4e-28 128.6 87 78.2
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 3.2e-28 128.3 83 79.5
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 3.2e-28 128.3 83 79.5
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 3.2e-28 128.3 83 78.3
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 4.1e-28 127.9 84 77.4
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 4.1e-28 127.9 92 77.2
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 4.1e-28 127.9 87 78.2
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 4.1e-28 127.9 88 76.1
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.1e-28 127.9 87 78.2
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 5.4e-28 127.5 83 81.9
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 5.4e-28 127.5 83 81.9
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 5.4e-28 127.5 87 78.2
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 5.4e-28 127.5 82 79.3
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 5.4e-28 127.5 87 79.3
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 7.1e-28 127.1 87 78.2
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 9.2e-28 126.7 83 79.5
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 9.2e-28 126.7 81 80.2
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 9.2e-28 126.7 81 80.2
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 9.2e-28 126.7 81 80.2
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 9.2e-28 126.7 87 78.2
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 9.2e-28 126.7 87 78.2
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 9.2e-28 126.7 87 74.7
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 1.2e-27 126.3 92 76.1
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.2e-27 126.3 82 76.8
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 1.2e-27 126.3 83 79.5
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.2e-27 126.3 83 79.5
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 2.1e-27 125.6 88 76.1
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 3.5e-27 124.8 81 79.0
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 3.5e-27 124.8 85 77.6
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 4.6e-27 124.4 84 82.1
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 4.6e-27 124.4 87 77.0
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 7.8e-27 123.6 81 79.0
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 7.8e-27 123.6 84 75.0
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.7e-26 122.5 87 74.7
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.1e-25 119.8 81 75.3
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.5e-25 119.4 87 74.7
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 7.3e-25 117.1 83 72.3
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.6e-24 115.9 83 71.1
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.1e-23 113.2 87 65.5
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 1.4e-23 112.8 87 63.2
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.8e-23 112.5 99 65.7
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 3.1e-23 111.7 81 70.4
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.5e-22 109.4 124 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.0e-22 109.0 89 60.7
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.6e-22 108.6 82 67.1
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 4.4e-22 107.8 84 65.5
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 5.8e-22 107.5 75 74.7
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 7.6e-22 107.1 69 79.7
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.1e-20 103.2 118 55.1
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.6e-19 99.4 87 56.3
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 2.7e-19 98.6 63 79.4
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.1e-17 93.2 64 75.0
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 3.3e-17 91.7 87 55.2
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 2.8e-16 88.6 57 78.9
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.4e-14 81.6 87 47.1
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 1.2e-11 73.2 78 50.0
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 3.5e-11 71.6 89 46.1
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.0e-10 68.6 78 43.6
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 9.0e-07 57.0 57 49.1


User provided reference genes

Program Settings