Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 8.1e-191 670.2 337 100.0
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 2.4e-118 429.5 340 63.8
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 1.2e-112 410.6 325 64.9
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.1e-91 340.9 337 53.4
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 3.3e-83 312.8 338 50.3
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 5.6e-83 312.0 335 51.6
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 4.7e-82 308.9 336 47.9
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 6.2e-82 308.5 339 48.7
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.1e-81 307.8 339 50.7
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.4e-81 306.6 340 49.4
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 3.1e-81 306.2 335 51.0
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 3.4e-80 302.8 337 48.1
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 4.4e-80 302.4 355 48.7
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 5.8e-80 302.0 339 51.9
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 5.8e-80 302.0 340 47.6
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 2.2e-79 300.1 337 48.4
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 2.2e-79 300.1 341 49.9
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 2.9e-79 299.7 337 50.1
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 3.8e-79 299.3 340 49.4
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 4.9e-79 298.9 337 48.4
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 8.4e-79 298.1 331 48.3
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 1.9e-78 297.0 339 51.0
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 7.1e-78 295.0 336 50.0
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 9.3e-78 294.7 330 50.0
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 9.3e-78 294.7 335 49.9
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 1.6e-77 293.9 338 49.1
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.7e-77 293.1 337 48.1
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 4.6e-77 292.4 334 48.2
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.0e-76 291.2 335 48.1
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.7e-76 290.4 336 48.5
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 2.3e-76 290.0 358 45.8
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 3.0e-76 289.7 337 48.7
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 5.1e-76 288.9 335 47.2
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 6.6e-76 288.5 339 49.3
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.1e-75 287.7 335 49.3
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 4.3e-75 285.8 336 48.8
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 9.6e-75 284.6 319 49.2
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 3.6e-74 282.7 333 46.2
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.1e-73 281.2 341 47.2
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.1e-73 281.2 336 47.6
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.4e-73 280.8 341 47.2
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.8e-73 280.4 316 48.4
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 2.4e-73 280.0 335 48.1
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 5.3e-73 278.9 332 47.0
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.5e-72 277.3 335 47.2
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.0e-72 276.9 341 46.9
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 2.6e-72 276.6 332 49.4
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.4e-72 276.2 333 47.1
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 5.8e-72 275.4 364 43.7
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.2e-71 273.5 333 47.4
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 2.9e-71 273.1 344 46.8
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 2.9e-71 273.1 345 47.0
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 4.9e-71 272.3 341 47.8
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 2.7e-69 266.5 384 43.2
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.6e-69 265.8 336 44.3
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.6e-69 265.8 338 44.4
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 6.0e-69 265.4 338 44.4
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.0e-69 265.4 338 44.4
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 1.0e-68 264.6 283 53.7
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.7e-68 263.8 342 45.3
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 3.9e-68 262.7 338 46.4
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 6.6e-68 261.9 336 44.3
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 1.9e-67 260.4 334 44.3
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 5.6e-67 258.8 344 46.8
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.6e-66 257.3 362 43.6
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 1.8e-65 253.8 334 45.2
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 2.4e-65 253.4 334 44.0
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 4.5e-64 249.2 313 46.0
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.9e-63 246.5 323 44.3
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.8e-63 246.1 332 44.6
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 6.4e-63 245.4 312 45.2
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 6.4e-63 245.4 348 43.4
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 8.4e-63 245.0 335 44.8
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 8.4e-63 245.0 321 44.2
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 4.2e-62 242.7 357 42.0
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 4.2e-62 242.7 312 43.3
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 1.2e-61 241.1 257 47.9
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.0e-60 238.0 333 44.1
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 2.3e-60 236.9 205 59.5
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 8.7e-60 235.0 332 43.7
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 1.1e-59 234.6 315 44.4
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 1.3e-58 231.1 333 43.2
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 3.7e-58 229.6 287 46.3
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 3.1e-57 226.5 346 42.5
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 4.0e-57 226.1 333 42.0
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 6.9e-57 225.3 333 40.8
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.0e-56 223.8 287 45.3
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 3.4e-56 223.0 324 42.6
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 5.8e-56 222.2 275 48.0
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 1.7e-55 220.7 345 40.3
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 4.9e-55 219.2 334 40.1
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 1.1e-54 218.0 341 39.6
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 1.1e-54 218.0 341 39.6
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 1.1e-54 218.0 268 48.9
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 7.1e-54 215.3 247 48.2
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 1.6e-53 214.2 209 52.6
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.3e-52 211.1 278 46.8
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 1.9e-51 207.2 261 48.3
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.5e-51 206.8 220 51.8
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 5.7e-51 205.7 359 37.3
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 1.3e-50 204.5 328 39.9
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 4.1e-49 199.5 209 52.2
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 6.9e-49 198.7 258 46.1
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 9.0e-49 198.4 259 42.5
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 9.7e-43 178.3 213 45.5
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 9.7e-43 178.3 220 45.9
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 9.0e-41 171.8 193 49.7
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 2.6e-40 170.2 207 44.9
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.6e-40 170.2 211 46.4
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 4.2e-38 162.9 208 47.6
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 1.6e-37 161.0 208 43.8
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.1e-37 160.6 211 45.0
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.7e-37 160.2 208 44.7
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.9e-36 156.4 207 42.5
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 1.3e-34 151.4 153 53.6
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.2e-32 144.8 144 55.6
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.5e-32 144.4 146 52.7
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 2.6e-32 143.7 195 42.6
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 2.6e-32 143.7 201 39.8
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 2.6e-27 127.1 126 49.2
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.6e-24 117.1 205 35.6
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 7.7e-24 115.5 183 38.3
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 5.0e-15 86.3 89 55.1
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 1.6e-13 81.3 80 53.8
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 1.8e-12 77.8 200 30.0
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 3.2e-06 57.0 54 57.4


User provided reference genes

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