Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 0.0e+00 1150.6 584 100.0
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 8.8e-310 1066.2 585 93.0
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.3e-281 972.6 593 83.6
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.2e-271 939.5 581 82.4
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 7.1e-243 844.0 604 71.7
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 7.1e-243 844.0 604 71.9
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 3.0e-241 838.6 597 70.0
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 3.1e-238 828.6 601 70.7
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 6.9e-238 827.4 604 68.7
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 3.4e-237 825.1 606 70.6
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 8.4e-236 820.5 619 67.7
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.4e-235 818.9 596 69.8
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 2.4e-235 818.9 564 75.4
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 3.5e-234 815.1 597 69.5
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 1.0e-233 813.5 588 69.7
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.0e-233 813.5 600 69.0
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 3.0e-233 812.0 605 67.8
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 5.6e-232 807.7 626 66.8
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 1.3e-231 806.6 601 68.9
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 1.6e-231 806.2 596 69.1
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 2.1e-231 805.8 607 67.1
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 3.7e-231 805.1 636 66.4
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.4e-230 803.1 600 68.8
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 5.3e-230 801.2 602 67.4
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.7e-228 796.2 583 73.4
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 3.8e-228 795.0 605 67.9
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.2e-227 791.6 599 67.1
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 6.0e-226 787.7 607 66.9
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 1.0e-225 786.9 603 67.8
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 3.9e-225 785.0 603 66.0
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 3.3e-224 781.9 602 66.3
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 6.2e-223 777.7 597 67.3
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.1e-222 776.9 592 66.9
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 3.1e-222 775.4 597 65.7
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 4.0e-222 775.0 603 65.8
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.6e-221 772.3 592 66.0
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 7.6e-221 770.8 606 65.0
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 7.6e-221 770.8 592 66.0
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 7.6e-221 770.8 606 65.5
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.7e-220 769.6 590 65.6
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 2.2e-220 769.2 609 64.2
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 2.9e-220 768.8 592 66.0
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.9e-220 768.8 590 66.4
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 8.4e-220 767.3 600 64.2
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 1.1e-219 766.9 604 64.7
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 3.2e-219 765.4 595 64.0
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 7.1e-219 764.2 593 64.9
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 1.2e-218 763.5 590 66.1
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 3.5e-218 761.9 599 63.6
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 7.9e-218 760.8 597 64.3
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 1.0e-217 760.4 588 64.5
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 3.0e-217 758.8 592 65.5
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 3.9e-217 758.4 592 65.7
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 5.1e-217 758.1 607 63.1
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 6.7e-217 757.7 598 63.5
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 5.7e-216 754.6 597 63.7
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 5.7e-216 754.6 592 63.9
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 2.8e-215 752.3 590 65.3
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 2.8e-215 752.3 586 65.4
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 2.8e-215 752.3 596 63.8
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.8e-215 752.3 615 62.6
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 4.8e-215 751.5 596 63.6
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 6.3e-215 751.1 611 62.5
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 1.4e-214 750.0 598 63.7
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 1.4e-214 750.0 598 63.5
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 4.1e-214 748.4 597 64.0
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 6.9e-214 747.7 597 64.0
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 5.9e-213 744.6 586 64.2
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.2e-212 742.7 596 63.1
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.9e-212 742.3 564 65.2
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.9e-211 739.6 585 62.2
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 4.2e-211 738.4 602 60.8
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.2e-210 736.9 585 62.2
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 7.9e-210 734.2 601 62.2
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 7.9e-210 734.2 540 69.4
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 1.4e-209 733.4 594 62.6
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 1.4e-209 733.4 602 62.1
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 6.7e-209 731.1 583 64.2
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 8.8e-209 730.7 598 62.5
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 1.1e-208 730.3 584 65.2
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 7.4e-208 727.6 589 61.8
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 7.7e-205 717.6 606 61.6
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 6.5e-204 714.5 552 64.7
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 2.5e-203 712.6 597 60.6
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 4.2e-203 711.8 599 61.1
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.6e-202 709.9 508 66.9
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 6.1e-202 708.0 595 60.7
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 6.1e-202 708.0 585 62.2
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 1.4e-201 706.8 607 59.8
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.8e-201 706.4 602 60.5
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 6.3e-199 698.0 606 59.4
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 8.2e-199 697.6 601 59.7
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 8.2e-199 697.6 601 59.4
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 1.8e-198 696.4 604 60.3
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 1.2e-197 693.7 602 59.1
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 2.0e-197 693.0 605 59.3
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 3.5e-197 692.2 602 58.5
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.7e-196 689.9 615 58.7
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 5.0e-196 688.3 591 59.4
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.6e-194 683.3 602 58.3
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 2.7e-194 682.6 597 59.8
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 1.8e-193 679.9 601 58.9
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.1e-192 677.2 599 57.6
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.1e-192 677.2 600 59.0
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 4.4e-192 675.2 599 57.4
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 7.4e-192 674.5 523 65.8
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.8e-191 672.5 589 60.3
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 3.7e-191 672.2 595 58.2
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 2.4e-190 669.5 595 58.0
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.4e-190 669.5 595 58.0
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.0e-189 666.4 585 58.3
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.6e-189 666.0 595 57.6
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.2e-186 657.1 595 57.0
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 4.7e-186 655.2 574 59.2
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 3.0e-185 652.5 597 56.1
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 2.4e-182 642.9 582 57.6
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 4.1e-182 642.1 600 58.5
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 1.9e-171 606.7 599 54.1
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 8.9e-169 597.8 600 52.0
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 2.2e-167 593.2 602 53.0
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 1.8e-166 590.1 583 52.5
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 4.7e-162 575.5 621 49.6
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 5.2e-161 572.0 423 67.4
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 5.2e-153 545.4 598 49.2
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 2.1e-149 533.5 470 60.4
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 2.7e-141 506.5 737 42.3
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 2.2e-135 486.9 394 65.7
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 6.0e-125 452.2 632 42.1
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 1.2e-120 438.0 453 49.2
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.5e-120 437.6 326 69.3
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 2.3e-116 423.7 319 63.9
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 1.9e-115 420.6 595 43.4
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.5e-112 411.0 491 46.6
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.8e-106 390.2 358 58.1
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.5e-104 382.9 354 59.3
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 1.5e-80 304.7 641 33.5
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 8.0e-77 292.4 323 50.5
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 5.7e-75 286.2 635 33.5
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 9.1e-65 252.3 193 66.3
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 9.1e-65 252.3 183 71.0
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 6.5e-63 246.1 162 72.8
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 1.6e-56 224.9 230 50.4
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 2.3e-55 221.1 115 96.5
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 6.8e-52 209.5 136 72.1
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 1.6e-45 188.3 366 38.0
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.6e-45 187.2 119 72.3
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.6e-40 171.8 115 70.4
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 7.8e-40 169.5 115 68.7
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 9.5e-38 162.5 120 67.5
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.6e-32 143.7 162 52.5
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.6e-27 127.9 100 66.0
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 4.4e-27 127.1 202 40.6
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.4e-27 127.1 100 66.0
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 9.9e-27 125.9 80 72.5
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 3.2e-25 120.9 80 71.2
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 4.6e-24 117.1 82 73.2
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 4.3e-22 110.5 180 41.7
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.2e-21 109.0 119 58.0
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 3.5e-16 90.9 65 63.1
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 4.3e-14 84.0 56 67.9
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 8.1e-13 79.7 82 51.2
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 4.4e-11 73.9 132 38.6
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 1.1e-09 69.3 41 78.0
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 4.6e-08 63.9 35 85.7
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 1.9e-06 58.5 43 65.1
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 9.6e-06 56.2 166 27.1


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