Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0455001 Helianthus annuus HOM05D000216 ORTHO05D000634 5.2e-87 324.3 162 100.0
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-79 297.4 157 94.9
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-79 297.4 157 94.9
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-79 297.4 157 94.9
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-79 297.4 157 94.9
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 6.9e-79 297.4 157 94.9
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 6.9e-71 270.8 157 87.9
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-59 233.0 157 77.1
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 3.5e-59 231.9 155 78.1
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 4.6e-59 231.5 157 79.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.5e-54 216.5 156 74.4
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 9.3e-52 207.2 159 73.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.4e-47 192.6 156 67.9
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 5.3e-47 191.4 158 67.1
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.5e-45 184.1 159 68.6
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 7.2e-44 181.0 159 67.3
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 9.4e-44 180.6 154 68.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.3e-42 176.0 159 66.7
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.3e-41 172.2 158 65.2
Solyc01g056330.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.4e-41 171.0 122 72.1
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.8e-40 169.1 159 64.8
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.8e-40 169.1 159 61.6
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-39 166.0 159 61.6
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 5.0e-37 158.3 160 60.6
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.1e-36 157.1 156 61.5
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 3.2e-36 155.6 81 96.3
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.1e-35 152.9 156 57.1
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-35 152.9 159 58.5
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 7.9e-35 151.0 160 58.1
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.0e-34 150.6 156 58.3
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.1e-34 148.3 135 65.9
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 6.7e-34 147.9 156 57.7
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 6.7e-34 147.9 156 57.7
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.6e-33 146.0 157 56.7
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 7.4e-33 144.4 161 57.1
Potri.019G027720 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.3e-29 133.7 124 62.9
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 2.2e-29 132.9 158 54.4
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 5.0e-29 131.7 156 53.8
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 5.0e-29 131.7 158 53.8
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 5.0e-29 131.7 158 53.8
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 5.0e-29 131.7 158 53.8
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 5.0e-29 131.7 158 53.8
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.9e-28 129.8 158 53.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.2e-28 129.0 81 79.0
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.2e-28 129.0 81 79.0
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.2e-28 129.0 81 79.0
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.2e-28 129.0 81 79.0
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-28 128.6 135 58.5
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.5e-28 128.3 103 70.9
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 2.7e-27 125.9 108 66.7
Migut.G01245 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.7e-24 116.7 88 71.6
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-23 114.0 121 58.7
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 1.8e-23 113.2 126 55.6
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.1e-23 112.1 127 55.9
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 4.1e-23 112.1 160 48.1
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 7.7e-22 107.8 138 48.6
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 1.0e-21 107.5 108 60.2
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 7.2e-20 101.3 83 65.1
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.0e-18 95.9 93 62.4
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.0e-17 93.2 106 54.7
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 4.4e-17 92.0 64 73.4
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.3e-16 90.5 63 74.6
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.2e-16 89.7 134 49.3
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-16 89.0 63 74.6
TPR.G2741 Trifolium pratense HOM05D000216 ORTHO05D000634 3.1e-15 85.9 126 47.6
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 5.0e-13 78.6 65 61.5
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.2e-12 75.9 85 55.3
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 1.4e-10 70.5 84 52.4
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 2.4e-07 59.7 55 60.0
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 2.4e-07 59.7 30 93.3
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.1e-07 58.9 142 33.8


User provided reference genes

Program Settings