Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 0.0e+00 1092.0 566 100.0
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 3.6e-199 698.7 536 65.7
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 1.3e-169 600.5 499 63.7
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.9e-144 516.9 542 50.0
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 1.6e-143 513.8 531 50.8
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 2.8e-143 513.1 522 51.3
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 5.8e-141 505.4 520 50.4
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 4.9e-140 502.3 512 50.6
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 4.8e-135 485.7 548 48.2
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 9.0e-134 481.5 530 48.9
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 1.2e-133 481.1 573 46.8
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 3.0e-129 466.5 516 48.1
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 3.0e-129 466.5 519 48.4
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 6.6e-129 465.3 553 46.7
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 1.9e-128 463.8 515 48.5
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 5.6e-128 462.2 560 46.8
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 2.8e-127 459.9 514 48.8
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 4.0e-126 456.1 505 48.9
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 2.6e-125 453.4 541 45.5
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 5.8e-125 452.2 520 47.1
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 7.6e-125 451.8 514 47.5
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.9e-123 447.2 542 45.4
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 3.2e-123 446.4 513 48.0
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 5.5e-123 445.7 516 45.9
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 7.1e-123 445.3 523 46.3
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 2.7e-122 443.4 512 48.8
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.8e-121 440.7 548 44.2
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 3.9e-121 439.5 541 44.5
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 6.7e-121 438.7 525 45.5
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 2.5e-120 436.8 544 44.7
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 4.3e-120 436.0 527 45.7
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.6e-119 434.1 515 45.4
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 8.1e-119 431.8 512 46.3
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 1.1e-118 431.4 551 43.9
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.1e-118 429.9 510 45.9
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 5.8e-117 425.6 520 46.3
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 3.8e-116 422.9 550 44.9
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 4.9e-116 422.5 511 43.6
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 2.5e-115 420.2 527 45.0
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 7.9e-114 415.2 536 43.8
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 1.3e-113 414.5 465 48.6
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.9e-113 412.9 473 48.0
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.1e-112 411.4 514 45.5
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 1.1e-112 411.4 526 44.9
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.9e-112 410.6 514 45.3
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.3e-112 409.8 514 45.3
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 4.3e-112 409.5 514 45.5
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 3.1e-110 403.3 529 42.3
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 5.3e-110 402.5 547 43.1
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 5.3e-110 402.5 508 45.3
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 3.4e-109 399.8 513 43.7
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 1.7e-108 397.5 512 44.3
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 6.5e-108 395.6 537 43.0
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.4e-107 394.4 511 42.9
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 3.2e-107 393.3 532 43.2
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 3.2e-107 393.3 514 43.4
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 4.2e-107 392.9 532 41.7
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 3.6e-106 389.8 513 42.7
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.1e-106 389.0 512 43.8
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 6.1e-106 389.0 544 42.8
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 1.5e-104 384.4 544 41.4
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.6e-103 380.9 516 44.4
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 2.2e-103 380.6 549 41.0
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 6.9e-102 375.6 515 43.9
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 5.9e-101 372.5 516 42.6
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 7.7e-101 372.1 510 43.3
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 2.2e-100 370.5 526 42.4
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 2.9e-100 370.2 510 42.7
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 1.9e-99 367.5 513 42.5
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 4.6e-98 362.8 518 41.3
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 6.1e-98 362.5 490 44.3
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 2.3e-97 360.5 518 42.1
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.9e-97 359.8 490 43.7
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 7.4e-96 355.5 510 42.2
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 1.7e-92 344.4 358 50.8
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 2.2e-92 344.0 514 39.7
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 5.0e-92 342.8 351 50.4
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 6.5e-92 342.4 485 41.4
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 9.4e-91 338.6 552 39.5
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 1.4e-89 334.7 509 39.7
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 5.2e-89 332.8 481 43.0
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 7.4e-88 328.9 343 49.3
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 4.8e-87 326.2 361 48.5
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 6.3e-87 325.9 509 37.5
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 8.2e-87 325.5 502 38.2
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 2.0e-85 320.9 503 38.6
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 5.0e-84 316.2 519 37.6
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.0e-81 308.5 332 50.6
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 4.0e-81 306.6 427 41.2
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 1.1e-78 298.5 504 36.5
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 3.5e-77 293.5 504 36.5
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 2.5e-75 287.3 340 46.2
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 7.2e-75 285.8 509 36.0
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 2.0e-72 277.7 459 39.4
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 6.3e-71 272.7 503 35.8
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 5.4e-62 243.0 579 31.6
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 9.2e-62 242.3 429 37.8
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 7.8e-61 239.2 344 40.1
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 4.3e-59 233.4 308 42.9
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 8.9e-57 225.7 651 29.3
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 2.0e-56 224.6 308 41.6
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.4e-54 218.4 244 46.3
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 4.7e-50 203.4 239 45.2
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 6.0e-45 186.4 255 43.1
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 2.9e-39 167.5 709 25.0
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 4.3e-35 153.7 124 58.1
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 3.4e-32 144.1 248 36.7
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.8e-32 143.3 116 61.2
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 5.8e-32 143.3 93 71.0
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 6.4e-31 139.8 163 46.0
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.1e-30 139.0 131 51.9
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 3.2e-30 137.5 93 63.4
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 4.6e-29 133.7 110 56.4
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 3.0e-28 131.0 88 64.8
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 5.6e-27 126.7 132 48.5
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 1.6e-26 125.2 128 46.9
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 2.0e-24 118.2 93 54.8
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 2.9e-23 114.4 149 44.3
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.9e-23 114.4 151 42.4
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.1e-22 112.5 118 49.2
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 1.9e-22 111.7 82 57.3
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 1.2e-21 109.0 82 59.8
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 2.7e-21 107.8 414 25.8
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 3.0e-20 104.4 119 46.2
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 5.6e-19 100.1 92 52.2
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 9.6e-19 99.4 100 45.0
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 2.8e-18 97.8 67 59.7
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 4.8e-18 97.1 88 50.0
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 6.2e-18 96.7 142 36.6
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 6.9e-17 93.2 91 44.0
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 6.9e-17 93.2 140 41.4
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 4.9e-15 87.0 84 46.4
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 1.1e-14 85.9 109 42.2
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 1.4e-14 85.5 95 46.3
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 1.2e-13 82.4 158 35.4
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 1.6e-13 82.0 75 57.3
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 2.3e-12 78.2 119 39.5
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 3.0e-12 77.8 92 45.7
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 3.9e-12 77.4 46 67.4
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.1e-11 75.9 70 48.6
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.8e-10 71.2 65 46.2
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 4.5e-08 63.9 42 59.5
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.3e-07 62.4 103 31.1
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 8.4e-07 59.7 90 40.0
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 2.4e-06 58.2 82 41.5


User provided reference genes

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