Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.4e-23 112.1 56 100.0
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.6e-19 98.6 56 85.7
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.6e-19 98.6 56 83.9
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 2.1e-19 98.2 55 83.6
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 2.8e-19 97.8 52 92.3
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 2.8e-19 97.8 56 83.9
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 3.6e-19 97.4 56 82.1
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.6e-19 97.4 54 83.3
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 4.7e-19 97.1 56 82.1
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 8.0e-19 96.3 56 82.1
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.0e-18 95.9 56 78.6
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 1.0e-18 95.9 56 80.4
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.0e-18 95.9 54 83.3
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 1.4e-18 95.5 54 83.3
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.4e-18 95.5 55 81.8
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.4e-18 95.5 55 81.8
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 1.4e-18 95.5 56 82.1
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.4e-18 95.5 53 88.7
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 2.3e-18 94.7 55 81.8
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 2.3e-18 94.7 55 80.0
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 2.3e-18 94.7 54 83.3
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.1e-18 94.4 54 85.2
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.1e-18 94.4 54 85.2
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.1e-18 94.4 54 85.2
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 3.1e-18 94.4 52 86.5
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 3.1e-18 94.4 56 78.6
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 3.1e-18 94.4 56 78.6
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 3.1e-18 94.4 52 88.5
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 4.0e-18 94.0 56 78.6
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 4.0e-18 94.0 54 79.6
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 5.2e-18 93.6 56 78.6
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 6.8e-18 93.2 52 84.6
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 6.8e-18 93.2 56 78.6
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 8.9e-18 92.8 50 88.0
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 8.9e-18 92.8 56 76.8
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 1.2e-17 92.4 52 86.5
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.5e-17 92.0 53 83.0
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.5e-17 92.0 54 83.3
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.5e-17 92.0 54 83.3
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.5e-17 92.0 54 79.6
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 1.5e-17 92.0 54 79.6
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 1.5e-17 92.0 55 78.2
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 2.0e-17 91.7 52 82.7
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 2.0e-17 91.7 52 80.8
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.0e-17 91.7 52 86.5
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 2.6e-17 91.3 56 76.8
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 2.6e-17 91.3 55 78.2
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 3.4e-17 90.9 56 75.0
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 3.4e-17 90.9 53 83.0
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 4.4e-17 90.5 52 78.8
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.4e-17 90.5 52 84.6
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 4.4e-17 90.5 55 78.2
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.5e-17 89.7 54 81.5
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 7.5e-17 89.7 56 71.4
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 9.8e-17 89.4 52 78.8
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 9.8e-17 89.4 52 82.7
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 9.8e-17 89.4 56 75.0
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 9.8e-17 89.4 54 75.9
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 1.3e-16 89.0 48 87.5
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 1.3e-16 89.0 52 82.7
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 1.3e-16 89.0 52 82.7
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 1.3e-16 89.0 48 87.5
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.7e-16 88.6 55 74.5
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 1.7e-16 88.6 56 78.6
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 1.7e-16 88.6 52 82.7
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 2.2e-16 88.2 51 84.3
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 2.9e-16 87.8 52 76.9
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.7e-16 87.4 54 74.1
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 4.9e-16 87.0 54 74.1
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 6.4e-16 86.7 52 76.9
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 6.4e-16 86.7 52 78.8
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.1e-15 85.9 54 72.2
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 1.4e-15 85.5 53 73.6
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 3.2e-15 84.3 53 73.6
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.1e-15 84.0 54 72.2
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 9.2e-15 82.8 49 79.6
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 1.2e-14 82.4 49 73.5
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 1.2e-14 82.4 55 72.7
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 1.2e-14 82.4 53 75.5
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.6e-14 82.0 54 70.4
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.6e-14 82.0 50 80.0
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 1.6e-14 82.0 51 76.5
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 2.7e-14 81.3 53 75.5
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 2.7e-14 81.3 53 75.5
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 2.7e-14 81.3 47 83.0
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.7e-14 81.3 50 76.0
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 2.7e-14 81.3 51 74.5
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 2.7e-14 81.3 49 81.6
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 3.5e-14 80.9 47 80.9
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 3.5e-14 80.9 47 80.9
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.6e-14 80.5 56 69.6
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.6e-14 80.5 49 77.6
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.3e-13 79.0 54 68.5
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 3.0e-13 77.8 46 82.6
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 3.0e-13 77.8 47 74.5
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 5.0e-13 77.0 52 69.2
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 8.6e-13 76.3 52 69.2
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.1e-12 75.9 45 77.8
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 1.5e-12 75.5 47 76.6
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.9e-12 75.1 47 70.2
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 3.3e-12 74.3 47 72.3
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 5.6e-12 73.6 56 60.7
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 2.1e-11 71.6 45 75.6
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-08 62.4 31 87.1
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.2e-08 61.6 31 87.1
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 3.7e-08 60.8 41 70.7
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 3.7e-08 60.8 52 51.9
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 3.7e-08 60.8 31 87.1
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 4.9e-08 60.5 31 83.9
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 4.9e-08 60.5 40 72.5
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 6.4e-08 60.1 41 65.9
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.1e-07 59.3 50 58.0
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 1.9e-07 58.5 41 65.9
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 3.2e-07 57.8 40 67.5
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 3.2e-07 57.8 40 65.0
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 3.2e-07 57.8 40 67.5
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 4.1e-07 57.4 39 66.7
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 4.1e-07 57.4 28 89.3
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 4.1e-07 57.4 38 68.4
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 7.0e-07 56.6 38 65.8
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 7.0e-07 56.6 27 88.9
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.1e-06 55.1 31 77.4
Haze_27757 Corylus avellana HOM05D005515 ORTHO05D006620 4.6e-06 53.9 49 46.9
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 7.8e-06 53.1 31 74.2


User provided reference genes

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