Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 1.9e-53 212.2 106 100.0
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 3.2e-24 115.2 87 67.8
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 6.2e-20 100.9 85 56.5
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.1e-19 100.1 86 60.5
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 3.1e-19 98.6 86 55.8
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 6.8e-19 97.4 86 57.0
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 1.2e-18 96.7 86 54.7
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.0e-18 95.9 86 57.0
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 3.4e-18 95.1 85 54.1
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 7.5e-18 94.0 86 55.8
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 3.7e-17 91.7 86 55.8
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 8.3e-17 90.5 87 54.0
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 8.3e-17 90.5 86 55.8
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.1e-16 90.1 86 54.7
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.9e-16 89.4 86 50.0
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.6e-15 86.3 64 62.5
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 2.1e-15 85.9 87 52.9
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 2.1e-15 85.9 86 52.3
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.7e-15 85.5 86 46.5
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 6.0e-15 84.3 86 47.7
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.0e-14 83.6 85 49.4
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.3e-14 83.2 86 47.7
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.7e-14 82.8 85 50.6
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 3.0e-14 82.0 85 52.9
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.0e-14 82.0 98 44.9
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 5.1e-14 81.3 86 52.3
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 5.1e-14 81.3 86 50.0
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 6.6e-14 80.9 85 48.2
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 1.1e-13 80.1 85 49.4
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.1e-13 80.1 64 60.9
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 2.5e-13 79.0 82 51.2
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 3.3e-13 78.6 86 53.5
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 3.3e-13 78.6 86 51.2
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 3.3e-13 78.6 86 51.2
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 4.3e-13 78.2 65 58.5
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 5.6e-13 77.8 73 54.8
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 9.5e-13 77.0 85 50.6
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.1e-12 75.9 86 51.2
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 2.1e-12 75.9 86 47.7
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.1e-12 75.9 81 49.4
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 2.1e-12 75.9 86 46.5
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 2.8e-12 75.5 86 51.2
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 4.7e-12 74.7 74 51.4
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 6.2e-12 74.3 65 58.5
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.1e-11 73.6 86 46.5
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.4e-11 73.2 111 36.9
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 4.0e-11 71.6 74 51.4
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 4.0e-11 71.6 83 47.0
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 6.8e-11 70.9 86 45.3
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.6e-10 68.9 61 55.7
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.3e-09 66.6 59 50.8
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 2.2e-09 65.9 95 43.2
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 3.8e-09 65.1 86 40.7
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 3.8e-09 65.1 80 43.8
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 4.9e-09 64.7 88 45.5
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 8.4e-09 63.9 86 44.2
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 8.4e-09 63.9 62 51.6
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.9e-08 62.8 86 40.7
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.9e-08 62.8 86 40.7
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 3.2e-08 62.0 80 41.2
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 3.2e-08 62.0 97 41.2
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 4.1e-08 61.6 86 39.5
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 5.4e-08 61.2 80 42.5
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.2e-07 60.1 53 54.7
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.6e-07 59.7 81 40.7
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.6e-07 59.7 81 40.7
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 4.6e-07 58.2 57 52.6
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 1.7e-06 56.2 89 40.4
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 3.9e-06 55.1 85 36.5
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 8.6e-06 53.9 71 38.0


User provided reference genes

Program Settings