Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 2.2e-119 432.2 203 100.0
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 7.3e-70 267.7 190 67.9
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.6e-69 266.5 179 69.8
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 5.4e-49 198.4 181 55.2
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 3.6e-45 185.7 190 46.8
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 8.4e-42 174.5 181 50.3
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 1.3e-39 167.2 181 47.5
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 2.5e-38 162.9 181 47.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 5.6e-38 161.8 181 44.8
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 4.8e-37 158.7 180 47.8
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 8.1e-37 157.9 190 43.2
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.8e-36 156.8 182 46.2
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 4.0e-36 155.6 171 45.6
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 6.9e-36 154.8 180 45.0
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.2e-35 154.1 182 44.0
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 1.5e-35 153.7 180 48.3
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 4.5e-35 152.1 182 44.5
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 4.5e-35 152.1 184 43.5
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 4.5e-35 152.1 196 42.9
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 1.0e-34 151.0 169 45.0
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.2e-34 149.8 181 44.2
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 4.9e-34 148.7 193 42.0
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 8.4e-34 147.9 180 43.9
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.1e-33 147.5 181 44.2
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.1e-33 147.5 183 45.4
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 1.4e-33 147.1 183 44.3
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.4e-33 147.1 179 44.1
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.9e-33 146.7 186 40.3
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 2.5e-33 146.4 179 41.9
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 3.2e-33 146.0 188 42.0
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 3.2e-33 146.0 182 43.4
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 7.1e-33 144.8 173 43.9
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 2.1e-32 143.3 179 41.9
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 2.1e-32 143.3 182 43.4
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.1e-32 143.3 174 42.0
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 3.5e-32 142.5 182 42.3
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.0e-31 141.0 181 42.5
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.0e-31 141.0 180 43.9
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 3.0e-31 139.4 179 42.5
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 8.7e-31 137.9 191 40.8
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 8.7e-31 137.9 173 43.4
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 1.5e-30 137.1 153 44.4
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 1.5e-30 137.1 181 40.3
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.5e-30 136.3 185 39.5
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 2.5e-30 136.3 173 41.6
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 3.3e-30 136.0 144 45.8
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 3.3e-30 136.0 183 42.1
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 7.4e-30 134.8 199 38.7
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 9.6e-30 134.4 187 39.6
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 9.6e-30 134.4 152 45.4
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.3e-29 134.0 179 41.3
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 3.7e-29 132.5 144 45.8
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 4.8e-29 132.1 183 37.7
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 4.8e-29 132.1 179 42.5
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 6.3e-29 131.7 185 40.0
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 6.3e-29 131.7 185 39.5
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 6.3e-29 131.7 185 40.0
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 8.2e-29 131.3 187 40.1
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 1.2e-27 127.5 142 45.1
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.2e-27 127.5 179 39.1
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.2e-27 127.5 138 42.8
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 5.9e-27 125.2 179 40.8
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.0e-26 124.4 181 38.7
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.7e-26 123.6 138 44.9
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 3.8e-26 122.5 182 39.6
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.2e-25 119.4 160 40.6
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 9.3e-25 117.9 190 36.8
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 1.6e-24 117.1 185 38.9
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 6.1e-24 115.2 149 39.6
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.0e-23 114.4 171 37.4
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 3.9e-23 112.5 152 40.1
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 3.9e-23 112.5 138 42.0
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 5.1e-23 112.1 132 43.2
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 1.9e-22 110.2 186 37.6
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 2.5e-22 109.8 137 43.1
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 4.8e-21 105.5 153 35.9
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 9.0e-20 101.3 117 45.3
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 6.5e-18 95.1 136 37.5
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 8.5e-18 94.7 118 45.8
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 4.2e-17 92.4 138 36.2
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 8.8e-15 84.7 72 55.6
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 3.6e-08 62.8 112 33.0
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 3.6e-08 62.8 118 31.4
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 2.3e-07 60.1 93 36.6


User provided reference genes

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