Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 4.9e-79 297.7 151 100.0
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 9.3e-54 213.8 144 74.3
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 3.0e-44 182.2 137 65.7
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 2.2e-39 166.0 151 55.6
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 3.8e-39 165.2 151 54.3
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 5.0e-39 164.9 150 55.3
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 5.0e-39 164.9 149 57.0
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 1.9e-38 162.9 139 57.6
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 2.5e-38 162.5 148 54.7
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 4.2e-38 161.8 149 54.4
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 7.2e-38 161.0 149 54.4
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 2.7e-37 159.1 148 53.4
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 2.7e-37 159.1 153 55.6
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 3.6e-37 158.7 151 53.0
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 6.1e-37 157.9 147 55.8
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 6.1e-37 157.9 150 52.7
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 7.9e-37 157.5 136 57.4
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 1.0e-36 157.1 149 53.0
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 2.3e-36 156.0 155 54.2
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 3.0e-36 155.6 129 56.6
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 3.0e-36 155.6 159 51.6
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 3.9e-36 155.2 149 53.0
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 3.9e-36 155.2 149 52.3
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 5.1e-36 154.8 146 52.1
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 6.7e-36 154.5 151 51.7
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 8.7e-36 154.1 155 53.5
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 8.7e-36 154.1 152 52.6
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 8.7e-36 154.1 149 52.3
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 1.5e-35 153.3 155 52.3
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 1.9e-35 152.9 155 51.0
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 1.9e-35 152.9 155 52.3
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 1.9e-35 152.9 155 48.4
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 2.5e-35 152.5 142 52.8
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 2.5e-35 152.5 143 53.8
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 2.5e-35 152.5 151 51.0
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 3.3e-35 152.1 148 53.4
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 4.3e-35 151.8 155 51.0
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 7.4e-35 151.0 139 55.4
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 7.4e-35 151.0 137 53.3
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 7.4e-35 151.0 154 50.6
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 9.7e-35 150.6 154 51.9
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 9.7e-35 150.6 144 52.8
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 1.3e-34 150.2 139 58.3
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 1.6e-34 149.8 140 55.0
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 2.2e-34 149.4 98 67.3
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 2.2e-34 149.4 153 52.3
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 2.2e-34 149.4 153 51.0
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 2.2e-34 149.4 128 57.0
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 2.8e-34 149.1 147 50.3
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 2.8e-34 149.1 148 50.7
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 2.8e-34 149.1 149 49.0
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 4.8e-34 148.3 131 58.0
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 6.3e-34 147.9 147 52.4
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 6.3e-34 147.9 158 48.7
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 6.3e-34 147.9 147 52.4
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 6.3e-34 147.9 152 50.7
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 8.2e-34 147.5 153 52.3
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 8.2e-34 147.5 154 51.3
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 8.2e-34 147.5 154 51.3
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 8.2e-34 147.5 127 53.5
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 1.1e-33 147.1 129 55.0
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 1.1e-33 147.1 151 50.3
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 1.1e-33 147.1 152 51.3
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 1.4e-33 146.7 146 52.7
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 1.8e-33 146.4 151 51.0
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 1.8e-33 146.4 138 54.3
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 3.1e-33 145.6 143 55.9
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 4.1e-33 145.2 134 50.7
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 6.9e-33 144.4 154 50.0
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 9.1e-33 144.1 154 51.9
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 1.5e-32 143.3 154 50.0
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 2.6e-32 142.5 139 51.1
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 2.6e-32 142.5 139 51.8
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 3.4e-32 142.1 143 55.2
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 4.5e-32 141.7 140 50.7
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.5e-32 141.7 140 50.7
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 5.9e-32 141.4 75 93.3
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 5.9e-32 141.4 75 93.3
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 5.9e-32 141.4 75 93.3
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.7e-32 141.0 143 49.0
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 7.7e-32 141.0 134 51.5
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 1.0e-31 140.6 155 51.0
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.0e-31 140.6 140 50.0
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 2.5e-30 136.0 118 58.5
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 9.4e-30 134.0 93 64.5
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 1.2e-29 133.7 92 65.2
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.6e-29 133.3 128 49.2
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 6.1e-29 131.3 115 56.5
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.0e-28 130.6 140 48.6
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 8.8e-28 127.5 151 45.7
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 8.8e-28 127.5 148 45.9
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 1.5e-27 126.7 146 46.6
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 6.9e-25 117.9 148 42.6
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 4.5e-24 115.2 85 58.8
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 4.2e-22 108.6 70 72.9
Lalb_Chr09g0331551 Lupinus albus HOM05D005801 ORTHO05D008555 1.2e-16 90.5 91 50.5
BcaC04g20246 Brassica carinata HOM05D005801 ORTHO05D016715 1.3e-15 87.0 87 44.8
BolC9t57462H Brassica oleracea HOM05D005801 ORTHO05D016715 1.3e-15 87.0 87 44.8
C09p45950 Brassica napus HOM05D005801 ORTHO05D016715 2.2e-15 86.3 87 43.7
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 7.2e-14 81.3 76 51.3
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 9.4e-14 80.9 110 40.0
BraA07t30260Z Brassica rapa HOM05D005801 ORTHO05D013666 2.7e-13 79.3 70 50.0
A07p26140 Brassica napus HOM05D005801 ORTHO05D013666 3.6e-13 79.0 70 50.0
BcaC03g16316 Brassica carinata HOM05D005801 ORTHO05D016715 8.0e-13 77.8 71 47.9
C03p54440 Brassica napus HOM05D005801 ORTHO05D041341 3.3e-11 72.4 56 53.6
BolC3t17730H Brassica oleracea HOM05D005801 ORTHO05D041341 3.3e-11 72.4 56 53.6
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 4.4e-11 72.0 55 54.5
BcaC04g22492 Brassica carinata HOM05D005801 ORTHO05D016715 3.7e-10 68.9 62 51.6
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 3.7e-10 68.9 131 34.4
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 8.2e-10 67.8 47 61.7
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.0e-07 60.8 131 32.1
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 5.0e-07 58.5 94 36.2
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 8.5e-07 57.8 47 55.3
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 5.5e-06 55.1 75 42.7


User provided reference genes

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