Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0362941 Helianthus annuus HOM05D004758 ORTHO05D006063 2.1e-120 435.6 215 100.0
EL10Ac1g01635 Beta vulgaris HOM05D004758 ORTHO05D006063 3.4e-65 252.3 215 61.4
AUR62026609 Chenopodium quinoa HOM05D004758 ORTHO05D006063 1.7e-64 250.0 216 60.6
AUR62034925 Chenopodium quinoa HOM05D004758 ORTHO05D006063 3.1e-63 245.7 216 59.7
HanXRQChr04g0115571 Helianthus annuus HOM05D004758 ORTHO05D006063 1.9e-60 236.5 396 41.2
Cpa.g.sc43.118 Carica papaya HOM05D004758 ORTHO05D006063 1.8e-58 229.9 177 65.0
ECA236G2519 Erigeron canadensis HOM05D004758 ORTHO05D006063 3.7e-56 222.2 396 39.4
BcaC04g18853 Brassica carinata HOM05D004758 ORTHO05D006063 4.1e-55 218.8 162 67.3
Aqoxy3G02274 Aquilegia oxysepala HOM05D004758 ORTHO05D006063 1.5e-52 210.3 162 67.9
SalBow4G2121 Salvia bowleyana HOM05D004758 ORTHO05D006063 1.9e-52 209.9 177 61.0
SalBow4G2875 Salvia bowleyana HOM05D004758 ORTHO05D006063 1.9e-52 209.9 177 61.0
Aqoxy5G01707 Aquilegia oxysepala HOM05D004758 ORTHO05D006063 4.3e-52 208.8 162 67.9
Lsat_1_v5_gn_7_26400 Lactuca sativa HOM05D004758 ORTHO05D006063 5.6e-52 208.4 396 36.4
Sabra13G0073200 Salix brachista HOM05D004758 ORTHO05D006063 2.8e-51 206.1 167 62.3
HanXRQChr15g0491711 Helianthus annuus HOM05D004758 ORTHO05D006063 3.4e-49 199.1 105 91.4
TAR375G0794 Trochodendron aralioides HOM05D004758 ORTHO05D006063 3.0e-45 186.0 396 33.6
CSS0032843 Camellia sinensis var. sinensis HOM05D004758 ORTHO05D006063 5.0e-45 185.3 378 34.9
Haze_00389 Corylus avellana HOM05D004758 ORTHO05D006063 5.0e-45 185.3 160 60.0
MELO3C002835.2 Cucumis melo HOM05D004758 ORTHO05D006063 5.0e-45 185.3 396 33.6
Hma1.2p1_0419F.1_g149420 Hydrangea macrophylla HOM05D004758 ORTHO05D006063 6.6e-45 184.9 396 33.3
Peaxi162Scf00516g00672 Petunia axillaris HOM05D004758 ORTHO05D006063 1.5e-44 183.7 395 34.2
ClCG09G017100 Citrullus lanatus HOM05D004758 ORTHO05D006063 3.3e-44 182.6 396 33.1
Hund26668 Selenicereus undatus HOM05D004758 ORTHO05D006063 4.3e-44 182.2 396 33.8
QL09p022998 Quercus lobata HOM05D004758 ORTHO05D006063 5.6e-44 181.8 396 33.8
CsaV3_1G037130 Cucumis sativus L. HOM05D004758 ORTHO05D006063 9.5e-44 181.0 396 33.3
MSTRG.26923 Avicennia marina HOM05D004758 ORTHO05D006063 1.6e-43 180.3 396 33.3
Dinv29141 Davidia involucrata HOM05D004758 ORTHO05D006063 2.1e-43 179.9 396 34.1
Nitab4.5_0004530g0070 Nicotiana tabacum HOM05D004758 ORTHO05D006063 2.1e-43 179.9 396 32.3
Sed0006906 Sechium edule HOM05D004758 ORTHO05D006063 3.6e-43 179.1 396 33.1
Thecc.05G217400 Theobroma cacao HOM05D004758 ORTHO05D006063 4.7e-43 178.7 396 33.6
GSVIVG01024351001 Vitis vinifera HOM05D004758 ORTHO05D006063 4.7e-43 178.7 396 32.8
CANSAT21G1832 Cannabis sativa HOM05D004758 ORTHO05D006063 1.1e-42 177.6 396 31.6
Oeu038086.1 Olea europaea HOM05D004758 ORTHO05D006063 1.4e-42 177.2 396 33.1
Actinidia08754 Actinidia chinensis HOM05D004758 ORTHO05D006063 2.3e-42 176.4 395 33.2
TWI09G0087 Tripterygium wilfordii HOM05D004758 ORTHO05D006063 2.3e-42 176.4 396 32.8
vmacro06528 Vaccinium macrocarpon HOM05D004758 ORTHO05D006063 4.0e-42 175.6 133 68.4
Aa31LG11G12880 Aethionema arabicum HOM05D004758 ORTHO05D006063 5.2e-42 175.3 133 66.9
Atru.chr10.1077 Acer truncatum HOM05D004758 ORTHO05D006063 6.8e-42 174.9 396 32.6
AL6G27760 Arabidopsis lyrata HOM05D004758 ORTHO05D006063 6.8e-42 174.9 396 32.3
Ciclev10018804m.g Citrus clementina HOM05D004758 ORTHO05D006063 6.8e-42 174.9 396 32.6
CSS0042937 Camellia sinensis var. sinensis HOM05D004758 ORTHO05D006063 1.2e-41 174.1 392 33.2
Carub.0006s1497 Capsella rubella HOM05D004758 ORTHO05D006063 1.2e-41 174.1 396 32.3
CiPaw.05G215200 Carya illinoinensis HOM05D004758 ORTHO05D006063 2.0e-41 173.3 396 32.6
AT5G16750 Arabidopsis thaliana HOM05D004758 ORTHO05D006063 3.4e-41 172.6 396 32.3
FvH4_7g34000 Fragaria vesca HOM05D004758 ORTHO05D006063 3.4e-41 172.6 154 55.8
Nitab4.5_0000108g0370 Nicotiana tabacum HOM05D004758 ORTHO05D006063 3.4e-41 172.6 396 32.8
CARHR196430 Cardamine hirsuta HOM05D004758 ORTHO05D006063 4.4e-41 172.2 396 31.8
Lj4g0021664 Lotus japonicus HOM05D004758 ORTHO05D006063 4.4e-41 172.2 396 32.1
Cc08_g01720 Coffea canephora HOM05D004758 ORTHO05D006063 5.8e-41 171.8 396 31.8
Thhalv10012644m.g Eutrema salsugineum HOM05D004758 ORTHO05D006063 5.8e-41 171.8 396 31.8
Potri.013G079600 Populus trichocarpa HOM05D004758 ORTHO05D006063 7.5e-41 171.4 396 32.1
A10p22470 Brassica napus HOM05D004758 ORTHO05D006063 1.7e-40 170.2 396 31.8
C09p60320 Brassica napus HOM05D004758 ORTHO05D006063 1.7e-40 170.2 396 31.8
BolC9t58865H Brassica oleracea HOM05D004758 ORTHO05D006063 1.7e-40 170.2 396 31.8
BraA10t44306Z Brassica rapa HOM05D004758 ORTHO05D006063 1.7e-40 170.2 396 31.8
A02p03760 Brassica napus HOM05D004758 ORTHO05D006063 2.2e-40 169.9 396 31.6
C02p08570 Brassica napus HOM05D004758 ORTHO05D006063 2.2e-40 169.9 396 31.6
BraA02t05341Z Brassica rapa HOM05D004758 ORTHO05D006063 2.2e-40 169.9 396 31.6
Sp6g27370 Schrenkiella parvula HOM05D004758 ORTHO05D006063 2.2e-40 169.9 396 31.6
BolC2t06772H Brassica oleracea HOM05D004758 ORTHO05D006063 2.9e-40 169.5 396 31.3
Lj3A886T35 Lonicera japonica HOM05D004758 ORTHO05D006063 2.9e-40 169.5 131 67.9
arahy.Tifrunner.gnm1.ann1.MVA0XP Arachis hypogaea HOM05D004758 ORTHO05D006063 3.7e-40 169.1 396 31.6
Lj3C885T17 Lonicera japonica HOM05D004758 ORTHO05D006063 4.9e-40 168.7 396 32.6
MBI04_g20348_MAGBIO Magnolia biondii HOM05D004758 ORTHO05D006063 4.9e-40 168.7 396 32.1
VMungo1215G2684 Vigna mungo HOM05D004758 ORTHO05D006063 8.3e-40 167.9 396 31.8
Phvul.003G200800 Phaseolus vulgaris HOM05D004758 ORTHO05D006063 1.1e-39 167.5 396 31.8
Potri.019G047300 Populus trichocarpa HOM05D004758 ORTHO05D006063 1.1e-39 167.5 396 31.3
THA.LOC104827198 Tarenaya hassleriana HOM05D004758 ORTHO05D006063 1.1e-39 167.5 134 63.4
BcaC03g18515 Brassica carinata HOM05D004758 ORTHO05D006063 1.9e-39 166.8 396 31.1
Nitab4.5_0000021g0710 Nicotiana tabacum HOM05D004758 ORTHO05D006063 1.9e-39 166.8 134 61.9
Psat4g058120 Pisum sativum HOM05D004758 ORTHO05D006063 3.2e-39 166.0 396 31.3
SGA_v2.0_scaffold18G08524 Striga asiatica HOM05D004758 ORTHO05D006063 4.1e-39 165.6 396 31.1
BcaC03g18514 Brassica carinata HOM05D004758 ORTHO05D006063 5.4e-39 165.2 396 31.1
Lalb_Chr13g0297781 Lupinus albus HOM05D004758 ORTHO05D006063 1.2e-38 164.1 396 30.8
Manes.09G127900 Manihot esculenta HOM05D004758 ORTHO05D006063 1.2e-38 164.1 134 64.9
Nn1g00147 Nelumbo nucifera HOM05D004758 ORTHO05D006063 2.1e-38 163.3 396 30.3
Lalb_Chr12g0201611 Lupinus albus HOM05D004758 ORTHO05D006063 2.7e-38 162.9 396 31.1
Gorai.013G183600 Gossypium raimondii HOM05D004758 ORTHO05D006063 3.5e-38 162.5 396 31.3
Medtr4g105700 Medicago truncatula HOM05D004758 ORTHO05D006063 3.5e-38 162.5 396 30.1
TPR.G37444 Trifolium pratense HOM05D004758 ORTHO05D006063 1.0e-37 161.0 396 29.8
Migut.F00084 Erythranthe guttata HOM05D004758 ORTHO05D006063 1.3e-37 160.6 396 30.8
Prupe.2G326400 Prunus persica HOM05D004758 ORTHO05D006063 3.0e-37 159.5 396 30.6
CAN.G1131.26 Capsicum annuum HOM05D004758 ORTHO05D006063 3.9e-37 159.1 396 30.8
Gohir.A13G156800 Gossypium hirsutum HOM05D004758 ORTHO05D006063 3.9e-37 159.1 396 31.1
CBR_g29896 Chara braunii HOM05D004758 ORTHO05D006063 6.6e-37 158.3 178 44.9
unitig_748.g6995 Utricularia gibba HOM05D004758 ORTHO05D006063 8.6e-37 157.9 396 31.6
MD07G1309100 Malus domestica HOM05D004758 ORTHO05D006063 1.5e-36 157.1 396 30.1
PSO063G1271 Papaver somniferum HOM05D004758 ORTHO05D006063 1.5e-36 157.1 394 30.5
Solyc03g097160.4 Solanum lycopersicum HOM05D004758 ORTHO05D006063 1.5e-36 157.1 396 30.3
PSO782G4173 Papaver somniferum HOM05D004758 ORTHO05D006063 1.9e-36 156.8 394 30.2
Gohir.D13G161600 Gossypium hirsutum HOM05D004758 ORTHO05D006063 2.5e-36 156.4 396 30.6
Sopen03g027900 Solanum pennellii HOM05D004758 ORTHO05D006063 2.5e-36 156.4 396 30.3
ATR0829G002 Amborella trichopoda HOM05D004758 ORTHO05D006063 3.3e-36 156.0 396 30.1
HPP92_020800 Vanilla planifolia HOM05D004758 ORTHO05D006063 5.6e-36 155.2 134 59.0
COL.COLO4_37813 Corchorus olitorius HOM05D004758 ORTHO05D006063 7.3e-36 154.8 134 59.0
Eucgr.K00075 Eucalyptus grandis HOM05D004758 ORTHO05D006063 9.5e-36 154.5 120 66.7
Sc02g0003740 Simmondsia chinensis HOM05D004758 ORTHO05D006063 1.2e-35 154.1 396 29.8
MD01G1236400 Malus domestica HOM05D004758 ORTHO05D006063 1.6e-35 153.7 134 57.5
COL.COLO4_14499 Corchorus olitorius HOM05D004758 ORTHO05D006063 2.1e-35 153.3 134 59.7
DCAR_014578 Daucus carota HOM05D004758 ORTHO05D006063 2.1e-35 153.3 380 31.8
SEGI_23303 Sequoiadendron giganteum HOM05D004758 ORTHO05D006063 2.1e-35 153.3 134 57.5
Ah.05g168380 Amaranthus hybridus HOM05D004758 ORTHO05D006063 3.6e-35 152.5 207 44.0
Zm00001eb072270 Zea mays HOM05D004758 ORTHO05D006063 8.1e-35 151.4 396 29.0
Os04g0592700 Oryza sativa ssp. japonica HOM05D004758 ORTHO05D006063 1.8e-34 150.2 396 28.8
CDE06G0148 Ceratophyllum demersum HOM05D004758 ORTHO05D006063 2.3e-34 149.8 134 55.2
RcHm_v2.0_Chr1g0384251 Rosa chinensis HOM05D004758 ORTHO05D006063 6.8e-34 148.3 396 29.3
FAN03G1445 Fragaria x ananassa HOM05D004758 ORTHO05D006063 1.5e-33 147.1 396 28.8
FAN10G3249 Fragaria x ananassa HOM05D004758 ORTHO05D006063 3.4e-33 146.0 396 28.5
Cfa016059 Carpinus fangiana HOM05D004758 ORTHO05D006063 4.4e-33 145.6 395 29.4
FAN01G1935 Fragaria x ananassa HOM05D004758 ORTHO05D006063 9.9e-33 144.4 396 28.5
arahy.Tifrunner.gnm1.ann1.64XA74 Arachis hypogaea HOM05D004758 ORTHO05D006063 1.3e-32 144.1 381 29.4
Ca_21920_v3 Cicer arietinum L. HOM05D004758 ORTHO05D006063 5.4e-31 138.7 381 28.1
FAN06G1039 Fragaria x ananassa HOM05D004758 ORTHO05D006063 1.5e-28 130.6 120 53.3
Mapoly0155s0010 Marchantia polymorpha HOM05D004758 ORTHO05D006063 8.9e-26 121.3 133 42.1
PGSC0003DMG400013158 Solanum tuberosum HOM05D004758 ORTHO05D006063 2.6e-25 119.8 177 38.4
FAN01G1276 Fragaria x ananassa HOM05D004758 ORTHO05D006063 2.2e-24 116.7 128 47.7
HanXRQChr15g0491701 Helianthus annuus HOM05D004758 ORTHO05D006063 2.7e-22 109.8 60 93.3
Pp3c19_12460 Physcomitrium patens HOM05D004758 ORTHO05D006063 3.0e-21 106.3 133 40.6
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 3.3e-20 102.8 137 43.8
Cfa027159 Carpinus fangiana HOM05D004758 ORTHO05D006063 9.6e-20 101.3 157 36.9
PRCOL_00002697 Prasinoderma coloniale HOM05D004758 ORTHO05D006063 4.2e-15 85.9 169 32.5
Glyma.17G089100 Glycine max HOM05D004758 ORTHO05D006063 7.1e-15 85.1 321 25.9
Glyma.05G038000 Glycine max HOM05D004758 ORTHO05D006063 9.3e-15 84.7 84 50.0
Eucgr.K00076 Eucalyptus grandis HOM05D004758 ORTHO05D006063 1.2e-14 84.3 96 47.9
Zm00001eb429930 Zea mays HOM05D004758 ORTHO05D006063 2.1e-14 83.6 95 46.3
Cre07.g344050 Chlamydomonas reinhardtii HOM05D004758 ORTHO05D006063 7.9e-14 81.6 186 29.6
FAN01G2473 Fragaria x ananassa HOM05D004758 ORTHO05D006063 4.0e-10 69.3 57 56.1
Aa31LG11G12810 Aethionema arabicum HOM05D004758 ORTHO05D006063 1.3e-08 64.3 104 39.4
Cpa.g.sc43.121 Carica papaya HOM05D004758 ORTHO05D006063 1.3e-08 64.3 76 47.4
HPP92_020701 Vanilla planifolia HOM05D004758 ORTHO05D006063 1.4e-07 60.8 37 70.3
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 7.9e-06 55.1 43 67.4


User provided reference genes

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