Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr12g0357931 Helianthus annuus HOM05D000966 ORTHO05D002384 2.6e-88 328.6 149 100.0
HanXRQChr12g0357821 Helianthus annuus HOM05D000966 ORTHO05D002384 1.8e-49 199.5 110 79.1
HanXRQChr03g0066001 Helianthus annuus HOM05D000966 ORTHO05D002384 1.5e-32 143.3 113 55.8
Lsat_1_v5_gn_7_50901 Lactuca sativa HOM05D000966 ORTHO05D002384 1.4e-30 136.7 113 55.8
Dinv41333 Davidia involucrata HOM05D000966 ORTHO05D002384 1.7e-28 129.8 98 56.1
AUR62028372 Chenopodium quinoa HOM05D000966 ORTHO05D002384 3.0e-28 129.0 98 57.1
Oeu010275.1 Olea europaea HOM05D000966 ORTHO05D002384 6.6e-28 127.9 98 55.1
Sopen07g002180 Solanum pennellii HOM05D000966 ORTHO05D002384 8.7e-28 127.5 112 46.4
CsaV3_1G029250 Cucumis sativus L. HOM05D000966 ORTHO05D002384 4.3e-27 125.2 113 52.2
EL10Ac8g18900 Beta vulgaris HOM05D000966 ORTHO05D002384 5.6e-27 124.8 98 57.1
Solyc07g006050.3 Solanum lycopersicum HOM05D000966 ORTHO05D002384 7.3e-27 124.4 98 50.0
Ah.09g228570 Amaranthus hybridus HOM05D000966 ORTHO05D002384 9.6e-27 124.0 98 53.1
MELO3C010193.2 Cucumis melo HOM05D000966 ORTHO05D002384 1.2e-26 123.6 113 51.3
MSTRG.6166 Avicennia marina HOM05D000966 ORTHO05D002384 1.6e-26 123.2 98 52.0
CAN.G1190.17 Capsicum annuum HOM05D000966 ORTHO05D002384 1.6e-26 123.2 112 44.6
PGSC0003DMG401011157 Solanum tuberosum HOM05D000966 ORTHO05D002384 1.6e-26 123.2 98 49.0
Eucgr.C01233 Eucalyptus grandis HOM05D000966 ORTHO05D002384 3.6e-26 122.1 113 49.6
ClCG06G012700 Citrullus lanatus HOM05D000966 ORTHO05D002384 4.7e-26 121.7 98 54.1
CSS0013550 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 6.2e-26 121.3 111 48.6
CSS0008046 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 1.4e-25 120.2 111 48.6
TAR383G0488 Trochodendron aralioides HOM05D000966 ORTHO05D002384 1.4e-25 120.2 112 50.9
ECA240G3489 Erigeron canadensis HOM05D000966 ORTHO05D002384 2.4e-25 119.4 112 51.8
MD16G1258900 Malus domestica HOM05D000966 ORTHO05D002384 2.4e-25 119.4 97 52.6
Ciclev10008144m.g Citrus clementina HOM05D000966 ORTHO05D002384 1.5e-24 116.7 95 51.6
QL02p094348 Quercus lobata HOM05D000966 ORTHO05D002384 1.5e-24 116.7 98 51.0
ECA240G2206 Erigeron canadensis HOM05D000966 ORTHO05D002384 2.6e-24 115.9 112 50.0
Lalb_Chr11g0072461 Lupinus albus HOM05D000966 ORTHO05D002384 2.6e-24 115.9 98 46.9
GSVIVG01023699001 Vitis vinifera HOM05D000966 ORTHO05D002384 3.4e-24 115.5 113 49.6
Cc06_g14440 Coffea canephora HOM05D000966 ORTHO05D002384 4.4e-24 115.2 98 49.0
BcaB03g12663 Brassica carinata HOM05D000966 ORTHO05D002384 5.8e-24 114.8 99 47.5
DCAR_014798 Daucus carota HOM05D000966 ORTHO05D002384 5.8e-24 114.8 98 48.0
AT4G30860 Arabidopsis thaliana HOM05D000966 ORTHO05D002384 7.6e-24 114.4 98 46.9
BraA08t33866Z Brassica rapa HOM05D000966 ORTHO05D002384 7.6e-24 114.4 98 48.0
Manes.14G113800 Manihot esculenta HOM05D000966 ORTHO05D002384 7.6e-24 114.4 113 47.8
vmacro13070 Vaccinium macrocarpon HOM05D000966 ORTHO05D002384 7.6e-24 114.4 98 51.0
BcaC01g01135 Brassica carinata HOM05D000966 ORTHO05D002384 9.9e-24 114.0 98 48.0
BolC3t21156H Brassica oleracea HOM05D000966 ORTHO05D002384 9.9e-24 114.0 98 48.0
Thhalv10025007m.g Eutrema salsugineum HOM05D000966 ORTHO05D002384 9.9e-24 114.0 98 46.9
Prupe.1G101500 Prunus persica HOM05D000966 ORTHO05D002384 9.9e-24 114.0 113 46.0
A08p19050 Brassica napus HOM05D000966 ORTHO05D002384 1.3e-23 113.6 98 48.0
AL7G21250 Arabidopsis lyrata HOM05D000966 ORTHO05D002384 1.7e-23 113.2 98 46.9
C03p88480 Brassica napus HOM05D000966 ORTHO05D002384 1.7e-23 113.2 98 48.0
Sed0005530 Sechium edule HOM05D000966 ORTHO05D002384 2.2e-23 112.8 114 46.5
Carub.0007s0969 Capsella rubella HOM05D000966 ORTHO05D002384 3.8e-23 112.1 98 48.0
Sc14g0001010 Simmondsia chinensis HOM05D000966 ORTHO05D002384 3.8e-23 112.1 112 50.0
Aa31LG2G19520 Aethionema arabicum HOM05D000966 ORTHO05D002384 4.9e-23 111.7 108 47.2
CARHR238730 Cardamine hirsuta HOM05D000966 ORTHO05D002384 4.9e-23 111.7 98 45.9
CiPaw.15G163700 Carya illinoinensis HOM05D000966 ORTHO05D002384 4.9e-23 111.7 98 46.9
Cpa.g.sc199.9 Carica papaya HOM05D000966 ORTHO05D002384 8.4e-23 110.9 98 46.9
THA.LOC104819902 Tarenaya hassleriana HOM05D000966 ORTHO05D002384 8.4e-23 110.9 113 45.1
Gohir.A13G206300 Gossypium hirsutum HOM05D000966 ORTHO05D002384 1.1e-22 110.5 98 48.0
Gohir.D13G210900 Gossypium hirsutum HOM05D000966 ORTHO05D002384 1.1e-22 110.5 98 48.0
Gorai.013G240900 Gossypium raimondii HOM05D000966 ORTHO05D002384 1.1e-22 110.5 98 48.0
Cfa020771 Carpinus fangiana HOM05D000966 ORTHO05D002384 1.4e-22 110.2 98 48.0
Thecc.09G154800 Theobroma cacao HOM05D000966 ORTHO05D002384 1.4e-22 110.2 113 46.0
DCAR_017928 Daucus carota HOM05D000966 ORTHO05D002384 1.9e-22 109.8 94 48.9
Os02g0611300 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D002384 2.4e-22 109.4 98 46.9
RcHm_v2.0_Chr4g0405361 Rosa chinensis HOM05D000966 ORTHO05D002384 2.4e-22 109.4 114 43.0
Potri.018G102100 Populus trichocarpa HOM05D000966 ORTHO05D002384 3.2e-22 109.0 98 50.0
Medtr0071s0100 Medicago truncatula HOM05D000966 ORTHO05D002384 4.2e-22 108.6 96 49.0
Sp7g28740 Schrenkiella parvula HOM05D000966 ORTHO05D002384 4.2e-22 108.6 99 48.5
Atru.chr7.388 Acer truncatum HOM05D000966 ORTHO05D002384 7.1e-22 107.8 95 49.5
Sabra18G0087800 Salix brachista HOM05D000966 ORTHO05D002384 7.1e-22 107.8 113 46.9
TWI34G0436 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 7.1e-22 107.8 98 46.9
FvH4_4g08820 Fragaria vesca HOM05D000966 ORTHO05D002384 9.3e-22 107.5 98 43.9
FAN12G1904 Fragaria x ananassa HOM05D000966 ORTHO05D002384 9.3e-22 107.5 98 43.9
COL.COLO4_36568 Corchorus olitorius HOM05D000966 ORTHO05D002384 1.2e-21 107.1 113 43.4
MBI15_g07483_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D002384 1.6e-21 106.7 98 45.9
Nn8g40137 Nelumbo nucifera HOM05D000966 ORTHO05D002384 1.6e-21 106.7 98 49.0
Glyma.06G223300 Glycine max HOM05D000966 ORTHO05D002384 2.1e-21 106.3 99 47.5
Phvul.001G083533 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 2.1e-21 106.3 98 48.0
Phvul.001G083666 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 2.1e-21 106.3 98 48.0
Phvul.009G195400 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 2.1e-21 106.3 98 48.0
FAN07G0432 Fragaria x ananassa HOM05D000966 ORTHO05D002384 2.7e-21 105.9 98 44.9
Zm00001eb184480 Zea mays HOM05D000966 ORTHO05D002384 3.5e-21 105.5 99 46.5
Lj6g0021714 Lotus japonicus HOM05D000966 ORTHO05D002384 4.6e-21 105.1 98 48.0
PGR102G3031 Punica granatum HOM05D000966 ORTHO05D002384 4.6e-21 105.1 98 44.9
SGA_v2.0_scaffold265G46072 Striga asiatica HOM05D000966 ORTHO05D002384 6.0e-21 104.8 117 40.2
Duzib168G1082 Durio zibethinus HOM05D000966 ORTHO05D002384 7.8e-21 104.4 113 42.5
VMungo1309G2426 Vigna mungo HOM05D000966 ORTHO05D002384 7.8e-21 104.4 98 48.0
FAN17G0011 Fragaria x ananassa HOM05D000966 ORTHO05D002384 1.0e-20 104.0 98 44.9
PSO063G2137 Papaver somniferum HOM05D000966 ORTHO05D002384 1.0e-20 104.0 114 43.9
PSO782G3854 Papaver somniferum HOM05D000966 ORTHO05D002384 2.3e-20 102.8 114 43.9
ATR0580G159 Amborella trichopoda HOM05D000966 ORTHO05D002384 3.0e-20 102.4 113 43.4
arahy.Tifrunner.gnm1.ann1.BQLE9W Arachis hypogaea HOM05D000966 ORTHO05D002384 3.0e-20 102.4 98 46.9
arahy.Tifrunner.gnm1.ann1.XD33H1 Arachis hypogaea HOM05D000966 ORTHO05D002384 3.0e-20 102.4 98 46.9
SHI02830 Sapria himalayana HOM05D000966 ORTHO05D002384 3.0e-20 102.4 131 41.2
Aqoxy7G03278 Aquilegia oxysepala HOM05D000966 ORTHO05D002384 1.5e-19 100.1 112 40.2
Psat1g023240 Pisum sativum HOM05D000966 ORTHO05D002384 1.5e-19 100.1 98 46.9
SEGI_18174 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 1.9e-19 99.8 100 43.0
TPR.G14496 Trifolium pratense HOM05D000966 ORTHO05D002384 7.3e-19 97.8 106 46.2
CANSAT11G0969 Cannabis sativa HOM05D000966 ORTHO05D002384 2.1e-18 96.3 100 44.0
TWI32G0919 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 2.8e-18 95.9 95 45.3
CDE02G0098 Ceratophyllum demersum HOM05D000966 ORTHO05D002384 6.2e-18 94.7 90 47.8
Actinidia33610 Actinidia chinensis HOM05D000966 ORTHO05D002384 8.1e-18 94.4 91 48.4
Duzib187G0743 Durio zibethinus HOM05D000966 ORTHO05D002384 1.3e-15 87.0 96 39.6
Hma1.2p1_0028F.1_g017810 Hydrangea macrophylla HOM05D000966 ORTHO05D002384 1.7e-15 86.7 110 38.2
Lj9C723G5 Lonicera japonica HOM05D000966 ORTHO05D002384 1.7e-15 86.7 112 39.3
Mapoly0045s0061 Marchantia polymorpha HOM05D000966 ORTHO05D002384 2.2e-15 86.3 102 43.1
Nitab4.5_0002809g0080 Nicotiana tabacum HOM05D000966 ORTHO05D002384 4.2e-14 82.0 96 37.5
Nitab4.5_0001036g0020 Nicotiana tabacum HOM05D000966 ORTHO05D002384 5.4e-14 81.6 56 51.8
Pp3c2_35860 Physcomitrium patens HOM05D000966 ORTHO05D002384 9.3e-14 80.9 103 39.8
Rhsim01G0021300 Rhododendron simsii HOM05D000966 ORTHO05D002384 3.5e-13 79.0 77 49.4
AagrBONN_evm.TU.Sc2ySwM_344.5298 Anthoceros agrestis HOM05D000966 ORTHO05D002384 9.9e-08 60.8 152 29.6
Zm00001eb041060 Zea mays HOM05D000966 ORTHO05D002384 1.9e-06 56.6 114 32.5


User provided reference genes

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