Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 5.6e-184 647.5 337 100.0
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 2.0e-72 276.9 357 46.5
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 9.0e-57 224.9 416 39.9
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 1.3e-52 211.1 317 45.7
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.3e-52 210.3 325 42.8
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.8e-50 203.4 322 41.9
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 4.8e-50 202.6 359 39.3
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 5.3e-49 199.1 440 35.7
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.0e-48 197.2 368 40.8
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 2.0e-48 197.2 457 36.1
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 4.5e-48 196.1 360 40.8
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 7.6e-48 195.3 360 40.3
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 1.0e-47 194.9 344 39.8
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.7e-47 194.1 378 39.7
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 3.8e-47 193.0 362 38.7
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 5.0e-47 192.6 359 38.2
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 1.9e-46 190.7 396 36.6
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 3.2e-46 189.9 364 39.8
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 4.2e-46 189.5 357 37.3
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 9.3e-46 188.3 307 42.0
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 1.2e-45 188.0 334 43.1
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 2.7e-45 186.8 354 37.3
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 1.0e-44 184.9 349 39.3
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 1.3e-44 184.5 362 39.8
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 1.8e-44 184.1 347 39.2
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 1.8e-44 184.1 358 37.4
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 3.0e-44 183.3 411 36.7
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 3.9e-44 183.0 361 38.5
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 5.1e-44 182.6 343 39.9
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 6.7e-44 182.2 347 40.6
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 8.7e-44 181.8 361 38.8
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 8.7e-44 181.8 367 37.1
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 1.1e-43 181.4 367 38.1
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 1.5e-43 181.0 358 35.8
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.5e-43 181.0 368 39.4
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.3e-43 179.5 349 39.0
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.4e-43 178.7 443 34.8
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 9.7e-43 178.3 353 36.8
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 2.2e-42 177.2 364 37.4
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 6.3e-42 175.6 313 41.2
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.1e-41 174.9 338 36.4
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 5.3e-41 172.6 362 35.6
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 1.2e-40 171.4 369 36.9
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.0e-40 170.6 326 39.3
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 4.5e-40 169.5 304 40.1
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.7e-39 167.5 279 42.3
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.9e-39 166.8 374 36.9
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.9e-39 166.8 373 36.5
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.8e-39 166.4 407 34.4
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 3.8e-39 166.4 319 36.7
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 5.0e-39 166.0 362 36.5
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 6.5e-39 165.6 325 40.6
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 6.5e-39 165.6 345 37.1
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 1.1e-38 164.9 354 37.9
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 1.1e-38 164.9 343 37.0
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 1.1e-38 164.9 302 41.4
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 1.4e-38 164.5 350 37.1
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.4e-38 164.5 411 34.5
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 1.9e-38 164.1 343 37.6
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.9e-38 164.1 312 37.8
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.9e-38 164.1 418 34.0
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 5.5e-38 162.5 357 36.1
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 9.4e-38 161.8 313 38.3
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 9.4e-38 161.8 381 36.7
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 1.2e-37 161.4 298 39.6
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 1.2e-37 161.4 354 34.7
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 1.6e-37 161.0 337 36.2
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 2.1e-37 160.6 341 36.4
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 3.6e-37 159.8 310 37.7
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 3.6e-37 159.8 360 36.4
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 3.6e-37 159.8 342 35.4
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 1.0e-36 158.3 355 36.9
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 1.0e-36 158.3 388 36.3
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.8e-36 157.5 341 35.5
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.8e-36 157.5 341 35.5
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.8e-36 157.5 341 35.5
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 2.3e-36 157.1 349 34.1
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 2.3e-36 157.1 398 34.2
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.3e-36 157.1 382 34.0
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 3.9e-36 156.4 355 35.2
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 3.9e-36 156.4 400 31.8
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 5.1e-36 156.0 350 34.0
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 1.5e-35 154.5 374 34.8
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 1.5e-35 154.5 435 31.5
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 2.5e-35 153.7 356 36.2
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 5.7e-35 152.5 387 34.4
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 7.4e-35 152.1 351 34.8
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 9.7e-35 151.8 322 36.6
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.3e-34 151.4 335 36.1
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 1.7e-34 151.0 362 34.0
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 1.7e-34 151.0 344 35.5
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 2.2e-34 150.6 380 33.7
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 2.8e-34 150.2 394 33.2
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 3.7e-34 149.8 328 36.0
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 4.8e-34 149.4 347 35.4
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 4.8e-34 149.4 347 35.4
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 6.3e-34 149.1 332 36.4
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 6.3e-34 149.1 332 36.4
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 1.1e-33 148.3 322 36.6
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.4e-33 147.9 377 35.3
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 1.8e-33 147.5 374 34.5
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 1.8e-33 147.5 302 36.1
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 4.1e-33 146.4 326 34.4
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 9.1e-33 145.2 391 35.3
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 2.0e-32 144.1 320 35.9
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.6e-32 143.7 355 32.7
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.3e-31 141.4 306 34.0
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 2.2e-31 140.6 357 35.9
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 2.9e-31 140.2 352 33.8
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 6.5e-31 139.0 310 33.5
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.5e-30 137.1 340 33.8
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 3.2e-30 136.7 331 32.9
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 7.2e-30 135.6 325 33.8
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 1.6e-29 134.4 292 36.3
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 2.1e-29 134.0 336 31.5
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 3.6e-29 133.3 320 35.0
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 7.9e-29 132.1 341 34.0
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 8.8e-28 128.6 324 34.3
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 1.1e-27 128.3 326 32.8
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.3e-27 126.7 361 33.0
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 9.7e-27 125.2 227 39.6
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 2.2e-26 124.0 292 38.0
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 3.7e-26 123.2 307 32.2
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-25 121.3 341 30.8
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 7.0e-25 119.0 341 29.0
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.6e-24 117.9 297 34.0
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.6e-24 117.9 297 34.0
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 2.0e-24 117.5 281 30.6
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 2.0e-24 117.5 281 30.6
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 3.8e-23 113.2 488 27.3
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 6.5e-23 112.5 305 32.5
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.9e-22 110.9 507 27.2
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 1.6e-21 107.8 351 32.2
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 4.7e-21 106.3 74 67.6
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 8.0e-21 105.5 85 67.1
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 1.4e-20 104.8 327 31.2
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 1.1e-19 101.7 348 29.3
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 1.5e-19 101.3 151 46.4
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 2.0e-19 100.9 330 31.5
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 2.6e-19 100.5 325 29.8
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.7e-18 97.8 288 32.3
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.2e-18 97.4 408 27.9
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 3.7e-18 96.7 323 31.3
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 8.2e-18 95.5 118 48.3
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.8e-17 94.4 127 42.5
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 4.1e-17 93.2 186 38.2
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 5.3e-17 92.8 134 44.8
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 2.7e-16 90.5 538 24.7
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 3.5e-16 90.1 269 32.3
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 5.9e-16 89.4 121 46.3
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 1.3e-15 88.2 126 45.2
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.3e-15 88.2 293 27.6
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 1.3e-15 88.2 260 32.3
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 2.2e-15 87.4 472 24.4
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 7.2e-14 82.4 400 27.2
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 1.2e-13 81.6 367 29.2
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 2.1e-13 80.9 55 63.6
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 3.6e-13 80.1 84 44.0
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 6.1e-13 79.3 238 35.3
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 6.1e-13 79.3 238 35.3
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.0e-12 78.6 131 41.2
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 1.0e-12 78.6 161 38.5
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.3e-12 77.4 211 32.2
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 3.0e-12 77.0 100 46.0
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 5.2e-12 76.3 137 38.7
SHI50054 Sapria himalayana HOM05D003719 ORTHO05D004116 8.8e-12 75.5 246 30.9
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.0e-11 74.3 229 26.2
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 7.5e-11 72.4 319 27.0
CAN.G1612.6 Capsicum annuum HOM05D003719 ORTHO05D004116 7.5e-11 72.4 75 46.7
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.7e-10 71.2 311 27.3
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 2.2e-10 70.9 221 31.2
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 6.3e-10 69.3 380 25.5
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-09 68.2 129 39.5
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 1.4e-09 68.2 195 28.2
CAN.G1260.1 Capsicum annuum HOM05D003719 ORTHO05D004116 1.8e-09 67.8 57 54.4
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 1.2e-08 65.1 277 27.8
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 4.5e-08 63.2 308 28.9
SHI15577 Sapria himalayana HOM05D003719 ORTHO05D004116 3.8e-07 60.1 31 83.9
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.9e-06 57.8 180 31.7
Aqoxy7G02797 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 3.2e-06 57.0 93 37.6
FAN01G0740 Fragaria x ananassa HOM05D003719 ORTHO05D004116 4.2e-06 56.6 116 35.3
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 7.2e-06 55.8 62 38.7
CAN.G1612.7 Capsicum annuum HOM05D000541 ORTHO05D000137 7.2e-06 55.8 69 40.6
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 7.2e-06 55.8 156 33.3
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 7.2e-06 55.8 55 49.1


User provided reference genes

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