Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 3.1e-162 575.1 290 100.0
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 7.1e-151 537.3 290 92.1
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 9.9e-145 516.9 289 88.6
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 8.6e-141 503.8 289 84.4
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 7.3e-140 500.7 289 84.1
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 3.1e-138 495.4 289 83.4
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 5.2e-138 494.6 289 85.8
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 6.8e-138 494.2 288 82.6
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 5.8e-137 491.1 287 82.9
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 7.6e-137 490.7 286 83.2
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 9.9e-137 490.3 284 84.2
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.3e-136 490.0 286 83.2
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.7e-136 489.6 289 82.0
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 2.2e-136 489.2 298 81.5
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 4.9e-136 488.0 286 81.5
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 8.4e-136 487.3 288 83.3
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.1e-135 486.9 290 82.4
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.4e-135 486.5 288 81.9
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.4e-135 486.5 285 82.1
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.9e-135 486.1 288 81.9
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.2e-135 485.3 286 80.8
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 5.4e-135 484.6 286 83.9
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 7.1e-135 484.2 289 81.7
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 7.1e-135 484.2 285 82.1
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 7.1e-135 484.2 289 81.0
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 1.2e-134 483.4 288 81.6
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 1.2e-134 483.4 286 82.9
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 1.2e-134 483.4 289 81.0
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.2e-134 483.4 287 82.6
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.2e-134 483.4 287 82.6
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 2.1e-134 482.6 288 80.6
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.1e-134 482.6 285 81.8
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 7.8e-134 480.7 285 82.1
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 7.8e-134 480.7 285 82.1
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 1.0e-133 480.3 285 82.1
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 1.0e-133 480.3 288 81.2
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.3e-133 479.9 290 81.4
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.7e-133 479.6 289 79.6
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 2.3e-133 479.2 286 80.8
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 3.9e-133 478.4 285 82.5
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 5.1e-133 478.0 289 79.9
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 8.7e-133 477.2 286 81.5
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 8.7e-133 477.2 285 81.4
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 1.1e-132 476.9 286 81.5
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.5e-132 476.5 289 79.6
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.5e-132 476.5 289 79.6
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 1.5e-132 476.5 285 82.1
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 1.9e-132 476.1 288 79.9
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 4.3e-132 474.9 286 80.4
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 5.6e-132 474.6 289 78.9
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 5.6e-132 474.6 288 81.6
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 5.6e-132 474.6 286 80.4
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 7.3e-132 474.2 288 79.9
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 7.3e-132 474.2 286 80.8
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 9.6e-132 473.8 286 80.8
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 9.6e-132 473.8 285 81.8
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 1.3e-131 473.4 286 79.0
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 1.3e-131 473.4 289 81.0
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 1.6e-131 473.0 289 79.2
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 2.1e-131 472.6 284 81.7
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 2.1e-131 472.6 285 80.7
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 78.5
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 78.5
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 2.8e-131 472.2 288 78.1
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 3.6e-131 471.9 288 78.5
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 3.6e-131 471.9 285 81.1
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 6.2e-131 471.1 288 78.5
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 6.2e-131 471.1 289 78.2
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 1.1e-130 470.3 284 79.6
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 1.1e-130 470.3 301 78.4
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.1e-130 470.3 288 77.1
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 2.4e-130 469.2 289 78.2
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 2.4e-130 469.2 287 81.2
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 3.1e-130 468.8 288 77.1
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 6.9e-130 467.6 289 78.2
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 9.0e-130 467.2 289 78.2
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 1.5e-129 466.5 289 77.9
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 77.9
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 77.9
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 3.4e-129 465.3 289 75.8
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 4.4e-129 464.9 288 76.0
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 4.4e-129 464.9 288 76.0
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 4.4e-129 464.9 288 76.0
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 5.8e-129 464.5 285 77.2
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 7.6e-129 464.2 289 78.5
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 7.6e-129 464.2 289 78.5
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 7.6e-129 464.2 288 78.1
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 9.9e-129 463.8 289 77.5
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 9.9e-129 463.8 288 75.7
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 9.9e-129 463.8 288 75.7
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.3e-128 463.4 323 73.7
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.7e-128 463.0 289 77.9
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 2.9e-128 462.2 289 77.5
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 4.9e-128 461.5 289 77.2
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 1.1e-127 460.3 272 84.9
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.1e-127 460.3 284 78.2
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 2.4e-127 459.1 289 76.8
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 3.2e-127 458.8 289 77.5
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.2e-127 458.8 289 77.9
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 3.2e-127 458.8 288 78.5
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 5.4e-127 458.0 290 76.9
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.4e-127 458.0 289 78.5
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 1.2e-126 456.8 284 76.8
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 7.9e-126 454.1 284 76.8
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 6.6e-125 451.1 307 74.3
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 6.6e-125 451.1 301 76.1
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 8.7e-125 450.7 286 74.8
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 1.1e-124 450.3 284 75.0
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 1.9e-124 449.5 284 75.7
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 5.6e-124 448.0 285 75.8
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 1.3e-123 446.8 284 74.3
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 1.3e-123 446.8 286 74.8
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 4.8e-123 444.9 289 75.1
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 1.1e-122 443.7 304 72.7
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 1.4e-122 443.4 284 75.0
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 4.0e-122 441.8 259 84.2
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 2.6e-121 439.1 289 75.8
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 5.8e-121 438.0 288 77.1
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 5.8e-121 438.0 444 56.1
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 2.9e-120 435.6 290 73.8
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.2e-119 432.2 287 74.9
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 5.5e-119 431.4 289 72.3
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 7.1e-119 431.0 284 72.9
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 7.9e-118 427.6 288 72.6
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.3e-117 426.0 291 71.8
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 3.9e-117 425.2 302 72.5
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 5.1e-117 424.9 284 72.5
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 6.7e-117 424.5 291 71.1
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.1e-116 423.7 291 71.1
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 7.4e-116 421.0 288 71.5
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 8.1e-115 417.5 307 69.4
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 1.5e-113 413.3 285 69.8
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 2.9e-112 409.1 230 86.1
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 1.6e-110 403.3 253 75.5
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 2.1e-110 402.9 285 66.3
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 1.3e-109 400.2 293 67.9
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 3.0e-109 399.1 287 66.2
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.9e-109 398.7 285 65.3
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 6.7e-109 397.9 285 65.6
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 6.7e-109 397.9 255 75.3
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 7.4e-108 394.4 232 83.2
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.0e-104 384.0 296 65.9
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 3.1e-98 362.5 294 65.6
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.5e-97 360.1 230 75.7
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 2.2e-96 356.3 289 60.6
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 8.5e-88 327.8 202 79.7
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 9.4e-87 324.3 283 57.2
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 2.5e-79 299.7 285 51.9
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.7e-78 296.2 268 60.4
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 8.2e-75 284.6 285 51.6
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 1.1e-71 274.2 281 50.2
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 1.9e-71 273.5 284 48.6
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 2.0e-68 263.5 162 77.2
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 2.3e-56 223.4 152 69.7
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 2.5e-55 219.9 151 74.2
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 6.8e-53 211.8 113 90.3
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 9.2e-50 201.4 127 77.2
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 3.8e-27 126.3 82 75.6
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.4e-21 107.8 92 60.9
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 1.5e-20 104.4 52 92.3
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 1.5e-20 104.4 75 68.0
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 2.6e-20 103.6 66 75.8
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 3.4e-20 103.2 145 42.1
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 4.4e-20 102.8 92 58.7
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 4.9e-19 99.4 92 57.6
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.9e-18 97.4 55 81.8
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 1.9e-18 97.4 135 39.3
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 2.4e-18 97.1 68 67.6
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 5.1e-16 89.4 90 54.4
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 1.6e-14 84.3 58 65.5
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 1.6e-14 84.3 58 65.5
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.0e-08 65.1 53 60.4
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 8.7e-08 62.0 72 51.4
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 1.5e-07 61.2 38 76.3
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 1.5e-07 61.2 41 63.4


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