Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 0.0e+00 1297.7 700 100.0
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 2.4e-253 879.0 723 71.0
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 4.2e-226 788.5 722 66.2
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 3.0e-224 782.3 757 58.1
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 5.7e-223 778.1 761 59.0
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 3.7e-222 775.4 782 57.5
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 1.4e-221 773.5 760 58.0
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 9.2e-221 770.8 776 57.6
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 3.5e-220 768.8 764 58.6
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 1.3e-219 766.9 765 59.9
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 2.9e-219 765.8 765 60.3
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 1.1e-218 763.8 771 56.9
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 1.2e-217 760.4 762 56.7
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 6.1e-217 758.1 766 57.6
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 1.0e-216 757.3 773 59.8
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.0e-216 755.7 759 60.2
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 5.2e-216 755.0 761 56.9
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 1.2e-215 753.8 764 56.4
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 3.4e-215 752.3 759 57.3
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 9.8e-215 750.7 776 56.4
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 4.9e-214 748.4 776 59.1
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 1.1e-213 747.3 760 56.3
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 2.4e-213 746.1 767 58.0
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 4.1e-213 745.3 728 58.1
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 7.0e-213 744.6 724 59.8
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 9.2e-213 744.2 755 55.8
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 3.9e-211 738.8 751 57.3
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 8.6e-211 737.6 764 55.2
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.9e-210 736.5 753 58.2
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 2.5e-210 736.1 793 55.2
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 3.3e-210 735.7 766 56.5
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 3.3e-210 735.7 723 58.4
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 4.3e-210 735.3 758 55.4
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 7.3e-210 734.6 749 56.7
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 7.3e-210 734.6 755 56.6
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 9.5e-210 734.2 755 56.3
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.8e-209 732.6 759 55.6
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 6.2e-209 731.5 774 56.3
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.4e-207 725.7 759 55.2
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 2.2e-206 723.0 778 55.4
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 2.9e-206 722.6 813 52.2
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 2.9e-206 722.6 749 56.6
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 3.7e-206 722.2 761 54.7
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 6.4e-206 721.5 766 56.4
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 6.4e-206 721.5 764 54.6
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.4e-205 720.3 760 54.6
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 7.0e-205 718.0 763 55.4
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.5e-202 710.3 759 54.3
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 4.3e-202 708.8 747 56.9
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 3.6e-201 705.7 742 54.7
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 4.0e-200 702.2 749 56.3
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 6.8e-200 701.4 767 56.6
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 2.2e-198 696.4 745 56.9
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 1.9e-197 693.3 763 53.7
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 4.1e-197 692.2 764 53.4
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 5.4e-197 691.8 799 52.2
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 1.3e-195 687.2 742 54.0
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 5.1e-195 685.3 753 57.6
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 4.3e-194 682.2 751 53.0
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 1.1e-192 677.6 777 53.4
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 4.0e-192 675.6 745 54.9
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 4.4e-191 672.2 766 52.6
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 5.4e-189 665.2 892 48.0
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 9.2e-189 664.5 774 52.3
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 1.6e-188 663.7 664 58.6
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 7.8e-188 661.4 762 53.7
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 1.0e-187 661.0 739 54.1
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 1.3e-187 660.6 747 55.3
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 9.6e-186 654.4 685 57.5
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 1.8e-184 650.2 815 49.4
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 5.2e-184 648.7 758 51.3
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 8.9e-184 647.9 777 52.5
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 3.4e-183 646.0 821 50.2
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 4.6e-180 635.6 805 50.1
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 2.3e-179 633.3 723 51.9
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 3.0e-179 632.9 671 56.0
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 2.5e-178 629.8 459 71.9
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 1.3e-177 627.5 803 49.9
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 1.6e-177 627.1 743 51.8
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 2.4e-176 623.2 823 48.6
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 6.9e-176 621.7 811 49.7
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 1.2e-175 620.9 795 49.9
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 5.8e-175 618.6 820 49.1
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 9.9e-175 617.8 432 72.5
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 1.3e-174 617.5 811 49.7
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 2.9e-174 616.3 739 51.3
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 3.2e-173 612.8 712 53.9
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 7.9e-172 608.2 731 53.2
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 3.0e-171 606.3 772 49.1
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 8.7e-171 604.7 752 52.5
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 8.7e-171 604.7 427 71.9
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 7.4e-170 601.7 742 49.6
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 1.6e-169 600.5 729 53.1
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 8.1e-169 598.2 737 46.7
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 8.1e-169 598.2 720 49.4
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 1.4e-168 597.4 672 53.3
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 2.0e-167 593.6 571 57.1
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 4.5e-167 592.4 956 43.7
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 2.4e-165 586.6 569 57.3
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 5.5e-165 585.5 756 47.9
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 7.1e-165 585.1 754 48.5
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 7.9e-164 581.6 756 48.3
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 7.1e-157 558.5 672 51.9
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 1.6e-156 557.4 731 50.8
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 1.1e-154 551.2 754 49.2
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 7.2e-149 531.9 354 73.7
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 9.3e-149 531.6 367 71.4
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 2.7e-148 530.0 719 50.2
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 3.0e-147 526.6 369 71.8
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.6e-145 520.8 343 75.2
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 4.5e-143 512.7 463 58.7
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 3.9e-139 499.6 373 66.2
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 4.4e-138 496.1 810 42.7
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 1.8e-136 490.7 398 62.8
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 6.9e-136 488.8 406 62.1
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 2.1e-132 477.2 412 61.4
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 7.9e-132 475.3 381 65.1
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.4e-128 463.8 433 55.2
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 4.1e-128 463.0 344 66.6
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 7.0e-128 462.2 352 62.2
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 1.6e-127 461.1 379 60.7
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 5.9e-127 459.1 577 49.7
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 5.2e-123 446.0 322 71.4
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 8.2e-121 438.7 371 63.6
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.8e-120 437.6 430 51.6
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 7.0e-120 435.6 298 71.5
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.4e-112 411.4 441 49.2
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 7.7e-111 405.6 477 48.0
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 5.5e-109 399.4 277 70.8
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.2e-108 398.3 442 47.3
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 3.7e-105 386.7 617 42.9
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 8.3e-105 385.6 541 47.3
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 5.4e-104 382.9 486 46.1
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 5.4e-104 382.9 741 38.6
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.6e-100 371.3 244 77.5
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 2.8e-100 370.5 555 44.1
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 1.8e-99 367.9 704 37.2
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 8.9e-99 365.5 438 47.0
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 1.1e-83 315.5 397 46.9
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 3.5e-79 300.4 176 93.2
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 4.7e-76 290.0 412 38.8
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 2.1e-68 264.6 475 38.1
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 6.2e-68 263.1 185 69.2
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 4.9e-65 253.4 271 52.8
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 8.4e-65 252.7 204 63.7
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.7e-62 245.0 401 46.4
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 5.6e-61 240.0 193 60.6
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 9.6e-61 239.2 409 46.5
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 9.6e-61 239.2 410 35.6
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 6.2e-60 236.5 403 41.9
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 1.4e-59 235.3 310 40.3
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 3.4e-58 230.7 522 40.6
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 1.9e-56 224.9 402 41.0
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 4.6e-55 220.3 188 61.7
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 2.5e-53 214.5 395 41.5
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 8.1e-52 209.5 384 43.0
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 2.7e-47 194.5 151 61.6
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 1.9e-45 188.3 365 37.0
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 1.6e-44 185.3 308 36.4
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 1.8e-43 181.8 103 87.4
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 1.2e-39 169.1 345 39.1
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.7e-36 157.5 243 43.2
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 4.8e-36 157.1 411 34.8
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 3.1e-35 154.5 146 52.1
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 3.4e-34 151.0 87 81.6
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 7.9e-31 139.8 401 34.7
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 1.1e-27 129.4 219 42.5
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 2.4e-27 128.3 63 98.4
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 3.1e-27 127.9 396 36.9
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 6.1e-23 113.6 64 84.4
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 7.4e-21 106.7 66 77.3
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.4e-19 102.4 130 49.2
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 7.7e-18 96.7 67 70.1
HanXRQChr11g0344511 Helianthus annuus HOM05D003684 ORTHO05D004428 9.4e-16 89.7 62 91.9
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.0e-14 86.3 63 65.1
TPR.G16635 Trifolium pratense HOM05D003684 ORTHO05D004428 6.3e-12 77.0 158 38.0
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 4.5e-10 70.9 52 63.5
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 1.3e-09 69.3 59 61.0
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 4.2e-08 64.3 55 63.6
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.2e-08 63.5 47 66.0
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.6e-07 61.2 39 76.9
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 6.7e-06 57.0 34 79.4


User provided reference genes

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