Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 5.4e-251 870.5 447 100.0
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.0e-177 627.1 488 68.2
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 2.4e-174 615.9 461 68.5
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 1.7e-135 486.9 473 55.6
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 4.2e-126 455.7 472 52.5
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.0e-124 451.1 470 52.6
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.3e-119 434.1 470 50.6
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 4.2e-118 429.1 468 50.0
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 3.9e-116 422.5 466 50.2
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 6.7e-116 421.8 494 49.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 8.1e-114 414.8 480 50.4
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 2.4e-113 413.3 459 50.5
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 4.0e-113 412.5 459 49.9
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 2.0e-112 410.2 469 49.7
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 7.6e-112 408.3 459 49.2
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 2.2e-111 406.8 457 49.7
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 1.1e-110 404.4 480 48.3
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.4e-110 404.1 457 48.8
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.5e-110 403.3 471 48.2
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 4.6e-109 399.1 474 48.9
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.0e-108 397.9 482 49.2
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.3e-108 397.5 461 49.9
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 3.9e-108 396.0 472 48.7
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 6.7e-108 395.2 474 47.7
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 2.1e-106 390.2 474 46.6
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 4.8e-106 389.0 464 47.6
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.1e-105 387.9 466 48.7
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.4e-105 387.5 472 46.4
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 2.6e-104 383.3 461 48.4
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 7.6e-104 381.7 471 47.1
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 1.3e-103 380.9 469 46.5
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-103 380.6 458 47.8
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 2.9e-103 379.8 403 52.1
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 6.5e-103 378.6 448 46.0
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.1e-102 377.9 469 45.2
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.2e-102 376.3 477 46.3
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 7.1e-102 375.2 452 49.3
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.0e-100 371.3 465 46.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.0e-100 369.8 479 45.7
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.5e-99 367.5 463 44.9
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.7e-99 364.8 458 46.7
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.3e-98 364.4 420 50.5
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 2.4e-97 360.1 465 43.0
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.0e-96 357.1 465 43.2
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.5e-96 355.9 465 46.5
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 7.7e-96 355.1 465 46.5
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.1e-94 351.3 448 44.2
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 5.5e-94 349.0 454 44.5
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 7.2e-94 348.6 437 44.4
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.4e-94 348.2 444 46.2
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.6e-93 347.4 465 41.5
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 3.9e-92 342.8 409 46.9
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.1e-91 341.3 458 43.4
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 7.4e-91 338.6 466 42.9
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 9.7e-91 338.2 463 41.7
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.7e-90 337.4 462 40.9
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 3.7e-90 336.3 459 45.3
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 6.3e-90 335.5 461 40.6
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.4e-89 334.3 462 44.4
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 5.3e-89 332.4 473 40.4
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 6.9e-89 332.0 458 42.8
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 6.9e-89 332.0 455 45.1
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 7.7e-88 328.6 450 42.9
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-87 327.4 479 39.9
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 2.2e-87 327.0 466 40.3
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.9e-87 326.6 447 44.3
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 5.0e-87 325.9 454 42.7
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 6.5e-87 325.5 455 43.5
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.1e-86 324.7 473 40.2
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 5.5e-86 322.4 459 42.0
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 2.1e-85 320.5 454 41.9
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 2.7e-85 320.1 455 42.6
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.6e-85 319.7 423 42.6
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 3.6e-85 319.7 443 41.8
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 4.7e-85 319.3 460 42.2
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 6.1e-85 318.9 454 41.6
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.4e-84 317.8 438 43.2
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.0e-84 316.6 454 41.4
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.1e-83 314.7 454 41.6
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.0e-83 313.9 466 41.4
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 3.3e-83 313.2 473 41.0
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 2.8e-82 310.1 440 41.1
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.7e-82 309.7 445 41.6
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.1e-81 308.1 342 49.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 3.1e-81 306.6 454 42.1
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.7e-79 300.8 479 39.5
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.7e-79 300.8 455 41.8
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 1.9e-78 297.4 465 39.1
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.1e-77 293.9 432 43.5
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 3.6e-77 293.1 333 47.7
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.1e-75 288.1 440 41.4
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.4e-73 281.2 456 39.5
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.9e-71 273.5 337 46.6
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 6.5e-71 272.3 302 51.0
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.1e-70 271.6 330 45.5
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 6.3e-66 255.8 455 38.5
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.0e-63 248.4 301 45.5
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 7.5e-51 205.7 330 38.8
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 5.2e-44 183.0 182 50.5
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.9e-38 164.5 371 33.7
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 3.9e-31 140.2 155 45.8
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 7.6e-27 125.9 210 39.0
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 4.9e-26 123.2 207 37.2
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.2e-25 120.6 154 44.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.7e-24 117.5 154 43.5
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.7e-24 117.5 154 43.5
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.2e-19 102.1 170 33.5
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.2e-19 102.1 170 33.5
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-18 98.6 118 45.8
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 3.8e-18 97.1 425 25.6
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.9e-18 96.7 128 44.5
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 8.4e-18 95.9 263 29.3
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 6.0e-16 89.7 85 55.3
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 6.6e-15 86.3 117 43.6
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 2.5e-14 84.3 132 37.9
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 3.3e-14 84.0 490 22.7
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.6e-13 81.6 72 58.3
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 5.3e-12 76.6 423 24.3
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.9e-09 68.2 129 33.3
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.2e-08 65.5 146 32.9
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 1.2e-08 65.5 54 59.3
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 7.9e-08 62.8 82 42.7
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.9e-06 58.2 114 34.2
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 3.3e-06 57.4 57 45.6


User provided reference genes

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