Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 3.5e-166 588.2 295 100.0
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 1.9e-143 512.7 295 88.8
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 4.0e-133 478.4 279 86.7
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 4.7e-118 428.3 298 72.1
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 2.8e-115 419.1 299 71.6
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 6.3e-115 417.9 299 71.6
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 8.3e-115 417.5 299 71.2
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 4.1e-114 415.2 300 70.7
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 1.0e-112 410.6 300 70.3
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 2.3e-112 409.5 299 69.6
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 3.8e-112 408.7 299 70.9
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.5e-111 406.8 299 69.2
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 1.9e-111 406.4 299 68.9
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 3.3e-111 405.6 300 69.7
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 5.6e-111 404.8 297 70.4
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 9.5e-111 404.1 299 68.9
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 2.1e-110 402.9 299 68.6
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 2.1e-110 402.9 299 69.9
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 2.8e-110 402.5 297 69.7
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 8.0e-110 401.0 300 68.7
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 2.3e-109 399.4 299 68.2
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 3.1e-109 399.1 301 69.8
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 5.2e-109 398.3 300 67.7
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.5e-108 396.7 299 69.2
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 2.6e-108 396.0 299 67.9
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 3.4e-108 395.6 304 68.4
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 4.4e-108 395.2 300 67.7
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 7.5e-108 394.4 300 67.7
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 9.8e-108 394.0 297 69.4
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 2.9e-107 392.5 299 68.2
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 6.4e-107 391.3 298 66.8
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 8.3e-107 391.0 305 67.5
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 8.3e-107 391.0 305 67.5
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 1.9e-106 389.8 299 67.6
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 3.2e-106 389.0 299 67.6
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 1.2e-105 387.1 315 66.3
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 1.6e-105 386.7 303 65.7
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 2.7e-105 386.0 300 66.7
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 3.5e-105 385.6 300 67.0
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 7.8e-105 384.4 299 66.6
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 1.0e-104 384.0 298 66.4
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 1.7e-104 383.3 294 68.0
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 3.9e-104 382.1 293 68.3
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 3.9e-104 382.1 339 61.1
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 5.0e-104 381.7 291 68.0
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 4.3e-103 378.6 300 64.3
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 9.5e-103 377.5 302 66.2
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.2e-102 377.1 313 64.2
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 2.8e-102 375.9 299 65.9
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 3.6e-102 375.6 294 66.7
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 8.0e-102 374.4 298 66.1
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.8e-101 373.2 320 63.1
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 3.1e-101 372.5 298 65.4
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 3.1e-101 372.5 294 66.3
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 5.2e-101 371.7 294 64.6
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 5.2e-101 371.7 294 64.6
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 5.2e-101 371.7 306 65.0
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 3.4e-100 369.0 294 65.3
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 5.8e-100 368.2 301 64.1
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 1.7e-99 366.7 300 64.0
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 1.1e-98 364.0 303 64.0
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 3.2e-98 362.5 293 65.5
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 5.4e-98 361.7 294 65.3
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 7.0e-98 361.3 293 64.8
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 2.7e-97 359.4 293 65.5
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 4.6e-97 358.6 292 66.1
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 7.8e-97 357.8 299 65.2
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 2.3e-96 356.3 275 66.5
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 3.9e-96 355.5 272 67.6
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 3.9e-96 355.5 302 62.3
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 6.6e-96 354.8 281 65.5
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 1.1e-95 354.0 271 65.7
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 1.5e-95 353.6 296 61.5
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 2.5e-95 352.8 279 64.2
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 2.5e-95 352.8 279 63.8
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 4.3e-95 352.1 285 63.2
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 4.3e-95 352.1 327 58.7
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 5.6e-95 351.7 272 66.5
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 1.2e-94 350.5 284 63.4
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 2.1e-94 349.7 303 63.4
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.8e-94 349.4 305 61.3
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 4.7e-94 348.6 303 58.1
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 8.1e-94 347.8 278 65.5
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 2.3e-93 346.3 271 64.9
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 5.2e-93 345.1 276 65.9
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 8.9e-93 344.4 269 66.9
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 7.5e-92 341.3 308 61.0
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 2.9e-91 339.3 279 65.6
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 4.9e-91 338.6 284 61.6
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 1.4e-90 337.0 285 61.4
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 1.9e-90 336.7 301 59.8
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 1.2e-89 334.0 299 60.9
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 1.6e-89 333.6 306 58.5
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 2.1e-89 333.2 303 59.1
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 6.6e-88 328.2 290 60.7
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 8.9e-85 317.8 251 66.9
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.3e-83 313.9 328 55.5
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 1.1e-82 310.8 330 54.8
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 9.2e-82 307.8 217 71.0
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 4.3e-79 298.9 300 53.3
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 3.6e-78 295.8 302 55.0
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 6.2e-78 295.0 219 69.4
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 1.1e-77 294.3 222 69.4
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 2.6e-76 289.7 244 63.9
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 3.1e-69 266.2 196 70.9
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 2.4e-66 256.5 225 62.7
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 5.1e-64 248.8 310 45.2
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 6.7e-64 248.4 301 46.8
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.9e-55 220.3 226 54.4
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 9.6e-55 218.0 305 44.3
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 5.8e-52 208.8 346 40.2
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 2.5e-42 176.8 177 58.2
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 5.7e-39 165.6 127 63.8
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 3.7e-38 162.9 121 66.9
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 2.7e-33 146.7 86 90.7
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 6.1e-33 145.6 86 89.5
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 6.1e-33 145.6 86 89.5
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 3.9e-32 142.9 77 97.4
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 4.8e-30 136.0 86 83.7
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 1.1e-26 124.8 175 48.0
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 1.9e-26 124.0 85 70.6
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 1.9e-26 124.0 85 70.6
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 1.7e-22 110.9 95 57.9
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 8.2e-22 108.6 94 57.4
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 9.1e-21 105.1 323 30.7
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 7.7e-20 102.1 345 27.5
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 1.0e-19 101.7 270 30.7
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.1e-13 80.1 65 58.5
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 1.9e-10 70.9 80 50.0
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 5.5e-10 69.3 45 73.3
PRCOL_00002868 Prasinoderma coloniale HOM05D004630 ORTHO05D005727 7.2e-10 68.9 273 24.9
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 1.5e-07 61.2 41 68.3


User provided reference genes

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