Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 9.5e-167 590.1 301 100.0
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 4.2e-114 415.2 318 68.9
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 2.6e-103 379.4 267 72.3
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 4.4e-87 325.5 328 51.8
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 2.8e-86 322.8 345 52.5
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 3.7e-86 322.4 333 50.5
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 5.3e-85 318.5 337 50.4
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 9.1e-85 317.8 340 50.0
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 9.1e-85 317.8 335 49.6
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 1.6e-84 317.0 337 49.9
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 2.7e-84 316.2 322 52.8
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 1.7e-83 313.5 311 54.0
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.7e-83 313.5 340 49.4
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 2.2e-83 313.2 339 49.9
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 1.5e-82 310.5 293 52.9
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 4.2e-82 308.9 320 50.6
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 5.5e-82 308.5 286 55.2
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 9.4e-82 307.8 309 54.0
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.6e-81 307.0 290 54.8
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 2.1e-81 306.6 290 52.1
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 6.1e-81 305.1 279 54.1
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 4.0e-80 302.4 309 51.1
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 6.8e-80 301.6 341 48.1
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 8.8e-80 301.2 301 51.2
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 1.2e-79 300.8 328 50.3
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.0e-79 300.1 307 50.5
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 2.6e-79 299.7 326 48.8
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.4e-79 299.3 337 49.3
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 4.4e-79 298.9 328 48.5
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 7.5e-79 298.1 290 53.8
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 1.1e-77 294.3 283 52.3
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.1e-77 294.3 325 51.4
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 1.4e-77 293.9 277 53.4
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 2.4e-77 293.1 336 47.0
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 3.1e-77 292.7 324 48.8
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 3.1e-77 292.7 325 50.8
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 7.0e-77 291.6 332 48.2
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 7.0e-77 291.6 339 49.6
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 9.1e-77 291.2 294 49.3
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.2e-76 290.8 285 51.9
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 2.0e-76 290.0 276 55.1
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 2.0e-76 290.0 294 51.4
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 2.7e-76 289.7 306 49.7
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 4.5e-76 288.9 329 48.0
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 7.7e-76 288.1 345 47.2
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 1.0e-75 287.7 274 54.4
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 1.3e-75 287.3 295 50.2
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 1.3e-75 287.3 286 51.4
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 1.3e-75 287.3 298 48.0
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 2.3e-75 286.6 287 50.9
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 2.9e-75 286.2 294 50.0
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 3.8e-75 285.8 294 49.0
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 5.0e-75 285.4 291 50.2
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 6.6e-75 285.0 330 48.8
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 8.6e-75 284.6 325 47.7
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.1e-74 284.3 290 51.4
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 3.3e-74 282.7 308 49.7
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 4.2e-74 282.3 323 47.7
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 5.5e-74 282.0 291 49.5
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 4.7e-73 278.9 291 51.2
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 4.7e-73 278.9 291 49.1
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 1.0e-72 277.7 314 47.8
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 1.4e-72 277.3 288 50.3
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 2.3e-72 276.6 291 48.8
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 6.8e-72 275.0 333 44.7
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 1.2e-71 274.2 338 45.9
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.6e-71 273.1 316 46.2
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 3.4e-71 272.7 319 46.1
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.4e-71 272.7 319 46.1
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 4.4e-71 272.3 311 49.2
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 7.5e-71 271.6 385 42.6
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 9.8e-71 271.2 316 45.6
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 1.7e-70 270.4 324 47.2
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 2.2e-70 270.0 292 49.3
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.4e-69 267.3 294 48.3
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 3.1e-69 266.2 290 47.9
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 4.1e-69 265.8 286 52.4
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 1.3e-67 260.8 363 41.3
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 8.6e-67 258.1 293 47.8
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 1.5e-66 257.3 324 44.4
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 1.2e-65 254.2 324 42.9
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 1.2e-65 254.2 340 42.6
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 4.4e-63 245.7 289 47.1
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 2.9e-62 243.0 306 43.1
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 6.0e-60 235.3 338 41.1
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 1.7e-59 233.8 287 44.9
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 1.1e-53 214.5 315 41.3
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 1.7e-51 207.2 282 39.4
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 3.3e-50 203.0 282 40.8
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 1.2e-49 201.1 337 40.4
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 6.2e-49 198.7 221 44.3
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.1e-45 188.0 218 46.8
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 2.8e-41 173.3 199 46.7
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 2.0e-39 167.2 278 38.1
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 2.8e-25 120.2 97 56.7
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.4e-24 117.9 299 28.4
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 1.5e-23 114.4 133 51.9
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.6e-23 113.6 88 56.8
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 2.2e-22 110.5 267 27.0
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 2.9e-22 110.2 111 47.7
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 1.8e-19 100.9 122 45.1
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-19 99.8 273 27.8
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 6.4e-14 82.4 87 44.8
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.1e-13 81.6 131 42.7
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 2.8e-09 67.0 56 55.4
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 1.8e-08 64.3 86 39.5


User provided reference genes

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