Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0281661 Helianthus annuus HOM05D000361 ORTHO05D227574 2.0e-61 239.2 143 100.0
ECA236G1460 Erigeron canadensis HOM05D000361 ORTHO05D008498 1.1e-08 63.9 39 92.3
HanXRQChr05g0141521 Helianthus annuus HOM05D000361 ORTHO05D008498 1.1e-08 63.9 39 92.3
Lsat_1_v5_gn_8_60021 Lactuca sativa HOM05D000361 ORTHO05D008498 4.3e-08 62.0 60 61.7
CAN.G520.36 Capsicum annuum HOM05D000361 ORTHO05D008498 9.5e-08 60.8 60 60.0
Hma1.2p1_0028F.1_g017220 Hydrangea macrophylla HOM05D000361 ORTHO05D008498 1.2e-07 60.5 60 60.0
Cc10_g11510 Coffea canephora HOM05D000361 ORTHO05D008498 2.1e-07 59.7 61 57.4
Medtr4g116870 Medicago truncatula HOM05D000361 ORTHO05D008498 2.8e-07 59.3 37 86.5
Solyc07g005020.3 Solanum lycopersicum HOM05D000361 ORTHO05D008498 2.8e-07 59.3 60 58.3
PGSC0003DMG400011837 Solanum tuberosum HOM05D000361 ORTHO05D008498 2.8e-07 59.3 60 58.3
CANSAT11G1655 Cannabis sativa HOM05D000361 ORTHO05D008498 3.6e-07 58.9 60 60.0
Oeu028794.1 Olea europaea HOM05D000361 ORTHO05D008498 3.6e-07 58.9 60 58.3
Sopen07g001130 Solanum pennellii HOM05D000361 ORTHO05D008498 3.6e-07 58.9 39 79.5
Peaxi162Scf00347g00329 Petunia axillaris HOM05D000361 ORTHO05D008498 6.2e-07 58.2 60 56.7
Sabra18G0095900 Salix brachista HOM05D000361 ORTHO05D008498 8.1e-07 57.8 39 76.9
GSVIVG01001046001 Vitis vinifera HOM05D000361 ORTHO05D008498 8.1e-07 57.8 60 56.7
Cc06_g23450 Coffea canephora HOM05D000361 ORTHO05D008498 1.1e-06 57.4 60 56.7
Dinv23299 Davidia involucrata HOM05D000361 ORTHO05D008498 1.1e-06 57.4 60 56.7
Gohir.A13G185700 Gossypium hirsutum HOM05D000361 ORTHO05D008498 1.1e-06 57.4 39 76.9
Nn8g39756 Nelumbo nucifera HOM05D000361 ORTHO05D008498 1.1e-06 57.4 39 79.5
Potri.006G188700 Populus trichocarpa HOM05D000361 ORTHO05D008498 1.1e-06 57.4 39 76.9
Hund21617 Selenicereus undatus HOM05D000361 ORTHO05D008498 1.1e-06 57.4 39 76.9
Sc18g0007590 Simmondsia chinensis HOM05D000361 ORTHO05D008498 1.1e-06 57.4 39 76.9
TWI63G1788 Tripterygium wilfordii HOM05D000361 ORTHO05D008498 1.1e-06 57.4 37 81.1
TAR625G0680 Trochodendron aralioides HOM05D000361 ORTHO05D008498 1.1e-06 57.4 60 56.7
VMungo1215G2534 Vigna mungo HOM05D000361 ORTHO05D008498 1.1e-06 57.4 39 76.9
EL10Ac8g18836 Beta vulgaris HOM05D000361 ORTHO05D008498 1.4e-06 57.0 39 76.9
CDE12G0216 Ceratophyllum demersum HOM05D000361 ORTHO05D008498 1.4e-06 57.0 60 61.7
DCAR_014827 Daucus carota HOM05D000361 ORTHO05D008498 1.4e-06 57.0 60 58.3
Glyma.13G156400 Glycine max HOM05D000361 ORTHO05D008498 1.4e-06 57.0 39 76.9
Glyma.17G104000 Glycine max HOM05D000361 ORTHO05D008498 1.4e-06 57.0 39 76.9
Gohir.D13G192200 Gossypium hirsutum HOM05D000361 ORTHO05D008498 1.4e-06 57.0 60 58.3
Phvul.003G175800 Phaseolus vulgaris HOM05D000361 ORTHO05D008498 1.4e-06 57.0 39 76.9
Ca_21604_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008498 1.8e-06 56.6 60 55.0
Lj4g0004865 Lotus japonicus HOM05D000361 ORTHO05D008498 1.8e-06 56.6 39 76.9
Potri.018G112800 Populus trichocarpa HOM05D000361 ORTHO05D008498 1.8e-06 56.6 39 74.4
RcHm_v2.0_Chr2g0086411 Rosa chinensis HOM05D000361 ORTHO05D008498 1.8e-06 56.6 60 56.7
SGA_v2.0_scaffold229G43357 Striga asiatica HOM05D000361 ORTHO05D008498 1.8e-06 56.6 60 56.7
SGA_v2.0_scaffold45G17059 Striga asiatica HOM05D000361 ORTHO05D008498 1.8e-06 56.6 60 56.7
Ciclev10007588m.g Citrus clementina HOM05D000361 ORTHO05D008498 2.4e-06 56.2 39 76.9
Lj7A452G24 Lonicera japonica HOM05D000361 ORTHO05D008498 2.4e-06 56.2 60 56.7
arahy.Tifrunner.gnm1.ann1.YFDY0T Arachis hypogaea HOM05D000361 ORTHO05D008498 3.1e-06 55.8 39 76.9
Gorai.013G218100 Gossypium raimondii HOM05D000361 ORTHO05D008498 3.1e-06 55.8 60 56.7
Psat4g052520 Pisum sativum HOM05D004165 ORTHO05D005063 3.1e-06 55.8 39 76.9
Cfa020868 Carpinus fangiana HOM05D000399 ORTHO05D008498 4.0e-06 55.5 60 55.0
CiPaw.15G171000 Carya illinoinensis HOM05D000361 ORTHO05D008498 4.0e-06 55.5 60 55.0
ClCG11G003620 Citrullus lanatus HOM05D000361 ORTHO05D008498 4.0e-06 55.5 60 55.0
Haze_19294 Corylus avellana HOM05D000361 ORTHO05D008498 4.0e-06 55.5 60 55.0
MELO3C004448.2 Cucumis melo HOM05D000361 ORTHO05D008498 4.0e-06 55.5 60 55.0
CsaV3_2G003500 Cucumis sativus L. HOM05D000361 ORTHO05D008498 4.0e-06 55.5 60 55.0
PSO339G2602 Papaver somniferum HOM05D000361 ORTHO05D008498 4.0e-06 55.5 39 71.8
unitig_62.g23480 Utricularia gibba HOM05D000361 ORTHO05D008498 4.0e-06 55.5 60 56.7
Atru.chr7.190 Acer truncatum HOM05D000361 ORTHO05D008498 5.2e-06 55.1 60 53.3
arahy.Tifrunner.gnm1.ann1.R3IAX4 Arachis hypogaea HOM05D000361 ORTHO05D008498 5.2e-06 55.1 39 74.4
AUR62011272 Chenopodium quinoa HOM05D000361 ORTHO05D008498 5.2e-06 55.1 39 74.4
AUR62042026 Chenopodium quinoa HOM05D000399 ORTHO05D008498 5.2e-06 55.1 39 74.4
COL.COLO4_18724 Corchorus olitorius HOM05D000361 ORTHO05D008498 5.2e-06 55.1 60 55.0
Duzib168G1075 Durio zibethinus HOM05D000361 ORTHO05D008498 5.2e-06 55.1 60 55.0
Prupe.7G252700 Prunus persica HOM05D000361 ORTHO05D008498 5.2e-06 55.1 36 80.6
MSTRG.26309 Avicennia marina HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
FvH4_1g01490 Fragaria vesca HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
FAN19G0984 Fragaria x ananassa HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
FAN26G0198 Fragaria x ananassa HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
FAN28G2637 Fragaria x ananassa HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
Lalb_Chr07g0179611 Lupinus albus HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 53.3
Manes.06G040400 Manihot esculenta HOM05D000361 ORTHO05D008498 6.8e-06 54.7 39 71.8
Nitab4.5_0000416g0090 Nicotiana tabacum HOM05D000361 ORTHO05D008498 6.8e-06 54.7 39 71.8
Nitab4.5_0010178g0020 Nicotiana tabacum HOM05D000361 ORTHO05D008498 6.8e-06 54.7 39 71.8
PSO384G4385 Papaver somniferum HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 53.3
Psat4g032920 Pisum sativum HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
Sed0027129 Sechium edule HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 53.3
TPR.G15812 Trifolium pratense HOM05D000361 ORTHO05D008498 6.8e-06 54.7 60 55.0
CSS0046490 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008498 8.9e-06 54.3 60 55.0
Psat4g052480 Pisum sativum HOM05D004165 ORTHO05D005063 8.9e-06 54.3 39 74.4
PGR142G3728 Punica granatum HOM05D000361 ORTHO05D008498 8.9e-06 54.3 60 53.3
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 8.9e-06 54.3 60 55.0
HPP92_010438 Vanilla planifolia HOM05D000361 ORTHO05D008498 8.9e-06 54.3 60 56.7


User provided reference genes

Program Settings