Gene: COL.COLO4_18724
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_18724
- Transcript Identifier COL.rna17487
- Gene Type Coding gene
- Location AWUE01016495.1 : 1182-5719 : negative
Gene Family Information
- ID HOM05D000361
- #Genes/#Species 1321/100
- Phylogenetic origin
- ID ORTHO05D008498
- #Genes/#Species 118/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna17487
- GenBank OMO90988.1
- id gene18696
- gene_name COLO4_18724
- uniprot A0A1R3J828
Descriptions
- Description Mini-chromosome maintenance, DNA-dependent ATPase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006268 | ISO | PLAZA Integrative Orthology | DNA unwinding involved in DNA replication | AT2G07690 |
| GO:0006270 | IEA | GOA Database | DNA replication initiation | |
| GO:0006270 | IEA | InterPro | DNA replication initiation | |
| GO:0032508 | IEA | GOA Database | DNA duplex unwinding | |
| GO:0032508 | IEA | InterPro | DNA duplex unwinding | |
| GO:0006260 | IEA | GOA Database | DNA replication |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G07690 |
| GO:0003688 | IEA | GOA Database | DNA replication origin binding | |
| GO:0003688 | IEA | InterPro | DNA replication origin binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003678 | IEA | GOA Database | DNA helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT2G07690 |
| GO:0000347 | ISO | PLAZA Integrative Orthology | THO complex | AT2G07690 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G07690 |
| GO:0042555 | IEA | GOA Database | MCM complex | |
| GO:0042555 | IEA | InterPro | MCM complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041562 | MCM, AAA-lid domain |
| IPR027925 | MCM N-terminal domain |
| IPR031327 | Mini-chromosome maintenance protein |
| IPR008048 | DNA replication licensing factor Mcm5 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR033762 | MCM OB domain |
| IPR001208 | MCM domain |
| Mapman id | Description |
|---|---|
| 13.2.1.2.4 | Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM5 |