Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 1.9e-150 535.8 270 100.0
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 5.6e-142 507.7 270 93.3
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 4.9e-130 468.0 270 89.6
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 2.5e-126 455.7 270 84.1
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 1.4e-124 449.9 270 83.7
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.4e-121 439.1 271 82.3
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 4.2e-121 438.3 269 79.6
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 5.4e-121 438.0 269 78.4
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 9.3e-121 437.2 271 81.5
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 9.3e-121 437.2 271 81.2
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 3.5e-120 435.3 283 77.7
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 6.0e-120 434.5 269 79.2
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.6e-119 431.0 271 79.7
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 8.7e-119 430.6 271 79.7
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.3e-117 426.8 271 78.2
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.2e-117 424.5 271 79.0
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 6.2e-117 424.5 271 79.3
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 8.1e-117 424.1 270 77.8
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.1e-116 423.7 273 78.0
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.1e-116 423.7 271 76.8
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 2.4e-116 422.5 273 78.8
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 2.4e-116 422.5 271 78.6
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 2.0e-115 419.5 269 76.2
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 2.6e-115 419.1 272 78.7
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 7.6e-115 417.5 269 75.5
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 9.9e-115 417.2 271 77.1
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 9.9e-115 417.2 271 77.1
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 9.9e-115 417.2 271 77.1
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 9.9e-115 417.2 272 76.5
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 2.2e-114 416.0 270 77.0
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 3.8e-114 415.2 270 75.9
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.8e-114 415.2 272 76.8
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 4.9e-114 414.8 271 74.2
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 6.4e-114 414.5 271 77.5
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 6.4e-114 414.5 273 76.2
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 8.4e-114 414.1 270 75.6
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 1.1e-113 413.7 271 77.5
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.1e-113 413.7 271 75.6
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 1.1e-113 413.7 270 77.0
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 1.1e-113 413.7 270 76.3
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 1.4e-113 413.3 270 76.7
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 1.4e-113 413.3 272 74.6
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 1.9e-113 412.9 271 75.6
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 2.4e-113 412.5 270 77.0
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 2.4e-113 412.5 271 76.8
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 2.4e-113 412.5 271 76.0
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.4e-113 412.5 282 75.2
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 3.2e-113 412.1 273 76.2
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 3.2e-113 412.1 270 76.7
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 4.2e-113 411.8 270 76.7
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 4.2e-113 411.8 270 75.2
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 4.2e-113 411.8 271 76.0
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 1.6e-112 409.8 270 75.9
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 2.1e-112 409.5 270 77.4
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 2.1e-112 409.5 271 76.4
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 3.5e-112 408.7 271 74.9
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 1.0e-111 407.1 270 76.3
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.0e-111 407.1 272 73.2
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 2.3e-111 406.0 283 74.6
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 3.9e-111 405.2 296 70.3
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.1e-111 404.8 271 74.5
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 5.1e-111 404.8 271 74.5
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 5.1e-111 404.8 272 73.5
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 6.6e-111 404.4 270 75.9
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 3.3e-110 402.1 271 73.8
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 5.6e-110 401.4 272 73.5
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 5.6e-110 401.4 272 75.0
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 9.6e-110 400.6 293 69.6
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 1.3e-109 400.2 284 71.8
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 1.3e-109 400.2 272 75.4
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 1.6e-109 399.8 274 73.7
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.6e-109 399.8 272 72.8
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 2.1e-109 399.4 297 70.4
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.8e-109 399.1 266 77.4
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 3.6e-109 398.7 272 73.9
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.8e-108 396.4 272 72.1
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.8e-108 396.4 272 72.1
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.4e-108 396.0 271 73.1
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 2.4e-108 396.0 259 77.2
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 2.4e-108 396.0 271 73.1
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 9.0e-108 394.0 271 72.7
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 9.0e-108 394.0 271 72.7
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.0e-107 392.9 271 73.1
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.6e-107 392.5 271 73.4
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 9.9e-107 390.6 271 73.1
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.3e-106 390.2 342 60.5
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.3e-106 390.2 271 72.3
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.3e-106 390.2 254 77.2
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.3e-106 390.2 286 71.3
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 8.4e-106 387.5 272 73.5
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.1e-105 387.1 272 72.8
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.9e-105 386.3 271 71.6
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.9e-105 386.3 277 72.6
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 1.9e-105 386.3 274 73.4
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.2e-105 385.2 271 73.4
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 6.0e-104 381.3 270 71.5
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 7.9e-104 380.9 330 62.1
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 7.9e-104 380.9 306 65.0
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 7.9e-104 380.9 306 65.0
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 7.4e-102 374.4 272 70.6
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 7.4e-102 374.4 273 70.3
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 7.4e-102 374.4 273 70.3
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 8.1e-101 370.9 272 69.5
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 2.4e-100 369.4 273 72.2
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 4.0e-100 368.6 273 68.5
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 6.9e-100 367.9 274 70.8
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 5.8e-99 364.8 237 78.1
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 1.0e-98 364.0 234 77.4
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 1.3e-98 363.6 273 71.1
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 7.1e-97 357.8 273 67.8
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 7.1e-97 357.8 273 66.7
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.6e-96 356.7 273 67.8
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 2.7e-96 355.9 270 66.7
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 4.6e-96 355.1 275 69.8
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 4.6e-96 355.1 273 71.1
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 1.8e-95 353.2 274 67.2
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 3.0e-95 352.4 317 60.6
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 4.3e-94 348.6 275 66.5
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 5.7e-94 348.2 231 74.5
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 9.6e-94 347.4 231 74.0
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.1e-93 346.3 231 74.9
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 4.8e-93 345.1 232 74.6
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.4e-92 343.6 332 57.8
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.5e-91 338.6 232 72.4
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 1.9e-89 333.2 230 72.6
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 7.1e-89 331.3 279 64.9
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 2.3e-87 326.2 267 62.2
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 4.3e-86 322.0 270 64.8
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 4.8e-85 318.5 263 64.3
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.1e-84 317.4 359 52.4
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 7.2e-81 304.7 232 67.7
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.6e-80 303.5 284 59.9
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 4.6e-80 302.0 234 69.2
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 1.5e-78 297.0 338 50.6
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 2.5e-78 296.2 279 58.1
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 2.2e-77 293.1 267 58.4
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 6.5e-74 281.6 261 57.5
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.1e-73 280.8 175 80.0
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 2.3e-71 273.1 232 64.2
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 4.1e-68 262.3 130 96.2
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 7.7e-67 258.1 182 70.9
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.0e-66 257.7 202 65.8
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 2.2e-66 256.5 259 55.2
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 3.8e-66 255.8 269 52.0
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 6.5e-66 255.0 275 52.4
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.2e-65 252.7 271 52.4
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 7.2e-65 251.5 197 64.0
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 3.0e-63 246.1 172 70.3
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 4.8e-61 238.8 263 51.0
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 6.3e-61 238.4 163 73.6
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.2e-59 234.2 261 49.4
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 9.4e-57 224.6 169 68.6
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 9.4e-57 224.6 174 66.1
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 4.0e-55 219.2 160 70.0
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 3.4e-54 216.1 148 70.9
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 9.8e-54 214.5 256 51.6
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 3.1e-52 209.5 214 55.6
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 2.0e-51 206.8 153 69.3
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.4e-46 189.5 202 54.5
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 4.4e-46 189.1 235 46.8
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 1.6e-43 180.6 134 70.9
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 2.7e-43 179.9 150 62.7
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 5.0e-42 175.6 232 44.0
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.1e-41 174.5 125 70.4
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 5.7e-38 162.2 183 50.3
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 4.9e-37 159.1 138 59.4
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.6e-35 152.5 163 52.1
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 1.2e-32 144.4 178 48.3
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 2.6e-30 136.7 88 77.3
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.7e-29 134.0 91 75.8
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.6e-24 117.5 150 48.0
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.1e-24 117.1 69 78.3
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 1.1e-23 114.8 70 78.6
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.4e-20 104.4 150 42.0
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 2.4e-20 103.6 74 71.6
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.0e-18 96.7 67 70.1
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 9.2e-12 75.1 137 39.4
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.9e-09 67.4 42 78.6
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 2.1e-08 63.9 125 33.6
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 6.2e-08 62.4 41 70.7
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.1e-07 60.1 34 88.2


User provided reference genes

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