Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0251011 Helianthus annuus HOM05D004422 ORTHO05D021544 4.7e-82 307.8 150 100.0
HanXRQChr07g0189481 Helianthus annuus HOM05D004422 ORTHO05D021544 7.8e-45 184.1 102 90.2
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 5.4e-38 161.4 84 95.2
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 2.5e-35 152.5 84 89.3
Oeu000053.1 Olea europaea HOM05D004422 ORTHO05D007331 2.5e-35 152.5 114 66.7
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 3.3e-35 152.1 84 89.3
SalBow5G1783 Salvia bowleyana HOM05D004422 ORTHO05D007331 8.1e-34 147.5 114 69.3
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 8.1e-34 147.5 94 78.7
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 1.8e-33 146.4 94 77.7
Dinv44059 Davidia involucrata HOM05D004422 ORTHO05D007331 3.1e-33 145.6 94 76.6
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 4.0e-33 145.2 94 76.6
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 1.2e-32 143.7 83 83.1
Cpa.g.sc22.56 Carica papaya HOM05D004422 ORTHO05D007331 1.5e-32 143.3 93 77.4
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 2.0e-32 142.9 93 77.4
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 2.0e-32 142.9 93 77.4
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 2.0e-32 142.9 93 77.4
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 2.0e-32 142.9 94 75.5
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 3.4e-32 142.1 114 64.0
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 3.4e-32 142.1 96 72.9
COL.COLO4_07156 Corchorus olitorius HOM05D004422 ORTHO05D007331 3.4e-32 142.1 83 83.1
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 3.4e-32 142.1 93 75.3
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 3.4e-32 142.1 105 69.5
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 4.5e-32 141.7 114 64.0
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 4.5e-32 141.7 93 75.3
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 5.8e-32 141.4 94 75.5
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 5.8e-32 141.4 94 74.5
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 5.8e-32 141.4 94 74.5
CARHR156840 Cardamine hirsuta HOM05D004422 ORTHO05D007331 7.6e-32 141.0 93 75.3
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 7.6e-32 141.0 93 75.3
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 7.6e-32 141.0 93 75.3
TPR.G13525 Trifolium pratense HOM05D004422 ORTHO05D007331 7.6e-32 141.0 94 75.5
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 7.6e-32 141.0 93 75.3
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 9.9e-32 140.6 93 74.2
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 9.9e-32 140.6 93 75.3
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 9.9e-32 140.6 94 75.5
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 9.9e-32 140.6 93 76.3
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 1.7e-31 139.8 107 67.3
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 1.7e-31 139.8 105 68.6
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 1.7e-31 139.8 105 68.6
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 1.7e-31 139.8 94 74.5
Prupe.2G132400 Prunus persica HOM05D004422 ORTHO05D007331 1.7e-31 139.8 93 75.3
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 2.2e-31 139.4 93 73.1
Phvul.010G049401 Phaseolus vulgaris HOM05D004422 ORTHO05D007331 2.2e-31 139.4 114 62.3
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 2.9e-31 139.0 110 66.4
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 2.9e-31 139.0 114 64.0
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 2.9e-31 139.0 93 75.3
VMungo0331G0292 Vigna mungo HOM05D000002 ORTHO05D000001 3.8e-31 138.7 88 76.1
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 4.9e-31 138.3 105 67.6
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 4.9e-31 138.3 105 67.6
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 4.9e-31 138.3 93 74.2
QL04p030045 Quercus lobata HOM05D004422 ORTHO05D007331 6.4e-31 137.9 96 71.9
QL09p024682 Quercus lobata HOM05D004422 ORTHO05D007331 6.4e-31 137.9 96 71.9
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 6.4e-31 137.9 96 71.9
CAN.G1473.2 Capsicum annuum HOM05D004422 ORTHO05D007331 1.1e-30 137.1 94 68.1
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 1.1e-30 137.1 94 70.2
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 1.4e-30 136.7 93 71.0
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 1.4e-30 136.7 93 73.1
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 1.4e-30 136.7 93 73.1
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 1.4e-30 136.7 113 63.7
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 1.4e-30 136.7 104 66.3
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 1.4e-30 136.7 94 72.3
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 1.4e-30 136.7 93 73.1
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 1.9e-30 136.3 83 78.3
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.9e-30 136.3 83 79.5
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 1.9e-30 136.3 94 71.3
FvH4_7g10270 Fragaria vesca HOM05D004422 ORTHO05D007331 3.2e-30 135.6 83 79.5
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 3.2e-30 135.6 83 79.5
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 3.2e-30 135.6 83 78.3
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.2e-30 135.2 113 63.7
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.2e-30 135.2 113 63.7
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea HOM05D004422 ORTHO05D007331 5.5e-30 134.8 111 63.1
Sp5g30300 Schrenkiella parvula HOM05D004422 ORTHO05D007331 5.5e-30 134.8 105 66.7
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 7.1e-30 134.4 105 66.7
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 7.1e-30 134.4 105 66.7
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 7.1e-30 134.4 107 63.6
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 7.1e-30 134.4 83 79.5
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 9.3e-30 134.0 94 68.1
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 9.3e-30 134.0 94 68.1
Glyma.03G111000 Glycine max HOM05D004422 ORTHO05D007331 1.2e-29 133.7 94 71.3
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 2.1e-29 132.9 94 70.2
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 2.1e-29 132.9 102 68.6
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 2.7e-29 132.5 94 68.1
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 2.7e-29 132.5 95 69.5
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 4.6e-29 131.7 94 68.1
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 4.6e-29 131.7 116 59.5
Carub.0005s1422 Capsella rubella HOM05D004422 ORTHO05D007331 1.3e-28 130.2 96 69.8
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 1.9e-27 126.3 94 64.9
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 1.4e-25 120.2 84 71.4
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 1.4e-25 120.2 94 66.0
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 3.1e-25 119.0 94 66.0
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 5.3e-25 118.2 97 60.8
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 7.6e-24 114.4 132 52.3
CDE02G3124 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 7.6e-24 114.4 94 62.8
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 6.0e-21 104.8 83 65.1
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 1.3e-20 103.6 83 62.7
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 3.9e-20 102.1 83 61.4
MCO03G257 Micromonas commoda HOM05D004422 ORTHO05D007331 6.7e-20 101.3 83 57.8
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 1.5e-19 100.1 83 60.2
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 3.3e-19 99.0 83 56.6
SEGI_08386 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 4.3e-19 98.6 75 65.3
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 1.0e-15 87.4 83 54.2
HanXRQChr09g0251021 Helianthus annuus HOM05D004422 ORTHO05D021544 1.0e-15 87.4 43 97.7
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 1.7e-15 86.7 77 62.3
TAR375G0830 Trochodendron aralioides HOM05D004422 ORTHO05D007331 2.9e-15 85.9 52 80.8
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 3.8e-15 85.5 51 80.4
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 9.3e-14 80.9 52 71.2
arahy.Tifrunner.gnm1.ann1.SPAE12 Arachis hypogaea HOM05D004422 ORTHO05D021544 6.7e-12 74.7 52 73.1
HanXRQChr16g0520031 Helianthus annuus HOM05D004422 ORTHO05D021544 3.3e-11 72.4 128 39.8
COL.COLO4_30046 Corchorus olitorius HOM05D004422 ORTHO05D007331 8.5e-07 57.8 71 43.7


User provided reference genes

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