Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0239371 Helianthus annuus HOM05D002223 ORTHO05D004187 1.5e-139 499.6 270 100.0
Lsat_1_v5_gn_7_41480 Lactuca sativa HOM05D002223 ORTHO05D004187 2.6e-83 312.8 266 65.8
ECA240G1552 Erigeron canadensis HOM05D002223 ORTHO05D004187 1.0e-74 284.3 266 62.4
Dinv36664 Davidia involucrata HOM05D002223 ORTHO05D004187 1.8e-71 273.5 267 56.6
Lj7C656T11 Lonicera japonica HOM05D002223 ORTHO05D004187 4.4e-70 268.9 276 59.1
Potri.018G083600 Populus trichocarpa HOM05D002223 ORTHO05D004187 2.4e-60 236.5 273 53.5
Gorai.009G026500 Gossypium raimondii HOM05D002223 ORTHO05D004187 3.1e-60 236.1 265 51.7
Gohir.D05G026400 Gossypium hirsutum HOM05D002223 ORTHO05D004187 4.1e-60 235.7 265 51.3
Duzib150G1030 Durio zibethinus HOM05D002223 ORTHO05D004187 1.2e-59 234.2 264 51.9
Nitab4.5_0001139g0020 Nicotiana tabacum HOM05D002223 ORTHO05D004187 1.2e-59 234.2 268 50.7
Thecc.09G106400 Theobroma cacao HOM05D002223 ORTHO05D004187 1.2e-59 234.2 266 51.5
Actinidia20395 Actinidia chinensis HOM05D002223 ORTHO05D004187 2.6e-59 233.0 266 48.9
Cc06_g10010 Coffea canephora HOM05D002223 ORTHO05D004187 2.6e-59 233.0 259 50.6
TWI34G1374 Tripterygium wilfordii HOM05D002223 ORTHO05D004187 2.6e-59 233.0 270 52.2
Nitab4.5_0001734g0020 Nicotiana tabacum HOM05D002223 ORTHO05D004187 5.9e-59 231.9 268 49.6
Oeu064906.2 Olea europaea HOM05D002223 ORTHO05D004187 8.5e-58 228.0 271 49.4
Manes.16G113200 Manihot esculenta HOM05D002223 ORTHO05D004187 2.5e-57 226.5 259 51.4
Peaxi162Scf00231g00432 Petunia axillaris HOM05D002223 ORTHO05D004187 2.5e-57 226.5 264 48.9
Prupe.7G226000 Prunus persica HOM05D002223 ORTHO05D004187 3.6e-56 222.6 270 48.9
MD15G1191200 Malus domestica HOM05D002223 ORTHO05D004187 2.3e-55 219.9 269 50.9
FvH4_1g05520 Fragaria vesca HOM05D002223 ORTHO05D004187 8.8e-55 218.0 274 48.9
FAN19G2095 Fragaria x ananassa HOM05D002223 ORTHO05D004187 1.5e-54 217.2 274 48.9
FAN26G0568 Fragaria x ananassa HOM05D002223 ORTHO05D004187 5.7e-54 215.3 280 48.6
FAN28G0975 Fragaria x ananassa HOM05D002223 ORTHO05D004187 5.7e-54 215.3 280 48.6
FAN26G1558 Fragaria x ananassa HOM05D002223 ORTHO05D004187 1.3e-53 214.2 280 48.2
Atru.chr7.1378 Acer truncatum HOM05D002223 ORTHO05D004187 1.8e-52 210.3 273 49.1
FAN23G1639 Fragaria x ananassa HOM05D001491 ORTHO05D004187 1.2e-51 207.6 275 46.9
COL.COLO4_34815 Corchorus olitorius HOM05D002223 ORTHO05D004187 1.6e-51 207.2 268 45.9
DCAR_028695 Daucus carota HOM05D002223 ORTHO05D004187 3.8e-50 202.6 222 51.4
PGR142G3208 Punica granatum HOM05D002223 ORTHO05D004187 7.2e-49 198.4 281 45.6
MBI04_g04854_MAGBIO Magnolia biondii HOM05D002223 ORTHO05D004187 2.6e-46 189.9 281 42.0
CANSAT02G0015 Cannabis sativa HOM05D002223 ORTHO05D004187 3.4e-46 189.5 287 44.6
Cpa.g.sc23.66 Carica papaya HOM05D002223 ORTHO05D004187 4.4e-46 189.1 277 44.8
MELO3C024693.2 Cucumis melo HOM05D002223 ORTHO05D004187 8.3e-45 184.9 269 42.8
Aqoxy7G01546 Aquilegia oxysepala HOM05D002223 ORTHO05D004187 1.4e-44 184.1 272 42.3
Ca_17325_v3 Cicer arietinum L. HOM05D002223 ORTHO05D004187 1.8e-44 183.7 262 42.0
ClCG06G008800 Citrullus lanatus HOM05D002223 ORTHO05D004187 1.2e-43 181.0 269 41.6
Medtr8g103227 Medicago truncatula HOM05D002223 ORTHO05D004187 1.6e-43 180.6 268 44.0
Ciclev10007255m.g Citrus clementina HOM05D002223 ORTHO05D004187 7.7e-43 178.3 281 45.6
SalBow5G4320 Salvia bowleyana HOM05D002223 ORTHO05D004187 7.7e-43 178.3 268 41.0
Glyma.08G037000 Glycine max HOM05D002223 ORTHO05D004187 8.6e-42 174.9 262 42.4
arahy.Tifrunner.gnm1.ann1.AAED67 Arachis hypogaea HOM05D002223 ORTHO05D004187 1.1e-41 174.5 262 40.8
arahy.Tifrunner.gnm1.ann1.LGD3I1 Arachis hypogaea HOM05D002223 ORTHO05D004187 1.1e-41 174.5 262 41.2
Lj4g0012717 Lotus japonicus HOM05D002223 ORTHO05D004187 1.1e-41 174.5 265 41.9
TPR.G23456 Trifolium pratense HOM05D002223 ORTHO05D004187 5.6e-41 172.2 264 39.8
Glyma.05G229600 Glycine max HOM05D002223 ORTHO05D004187 1.6e-40 170.6 264 41.7
VMungo0251G2909 Vigna mungo HOM05D002223 ORTHO05D004187 6.1e-40 168.7 270 40.0
PGSC0003DMG400005092 Solanum tuberosum HOM05D002223 ORTHO05D004187 8.0e-40 168.3 264 40.2
Sed0026044 Sechium edule HOM05D002223 ORTHO05D004187 2.2e-37 160.2 272 37.9
Haze_25778 Corylus avellana HOM05D002223 ORTHO05D004187 4.6e-35 152.5 160 50.0
Psat7g015040 Pisum sativum HOM05D002223 ORTHO05D004187 1.9e-33 147.1 266 38.3
arahy.Tifrunner.gnm1.ann1.VBA0Y3 Arachis hypogaea HOM05D002223 ORTHO05D004187 6.8e-31 138.7 244 36.5
arahy.Tifrunner.gnm1.ann1.3QR2KS Arachis hypogaea HOM05D002223 ORTHO05D004187 3.4e-30 136.3 244 36.1
PSO566G0357 Papaver somniferum HOM05D002223 ORTHO05D004187 3.2e-28 129.8 224 37.9
HPP92_023942 Vanilla planifolia HOM05D002223 ORTHO05D004187 4.7e-24 115.9 262 31.7
Lalb_Chr22g0352681 Lupinus albus HOM05D002223 ORTHO05D004187 3.1e-23 113.2 155 43.9
HPP92_023910 Vanilla planifolia HOM05D002223 ORTHO05D004187 3.1e-23 113.2 261 31.8
HPP92_003928 Vanilla planifolia HOM05D002223 ORTHO05D004187 1.4e-20 104.4 190 34.7
GSVIVG01015355001 Vitis vinifera HOM05D002223 ORTHO05D004187 1.6e-16 90.9 81 54.3
Zm00001eb119290 Zea mays HOM05D002223 ORTHO05D004187 1.3e-13 81.3 218 29.4
Sabra18G0071900 Salix brachista HOM05D002223 ORTHO05D004187 2.7e-11 73.6 80 52.5
ATR0315G104 Amborella trichopoda HOM05D002223 ORTHO05D004187 4.6e-11 72.8 271 28.8
Eucgr.C01271 Eucalyptus grandis HOM05D002223 ORTHO05D004187 6.0e-11 72.4 87 44.8
SEGI_19857 Sequoiadendron giganteum HOM05D002223 ORTHO05D004187 7.8e-11 72.0 190 27.9
Lalb_Chr22g0352691 Lupinus albus HOM05D002223 ORTHO05D004187 8.6e-10 68.6 87 44.8
CSS0015473 Camellia sinensis var. sinensis HOM05D002223 ORTHO05D004187 1.1e-09 68.2 193 28.0
ECA232G2209 Erigeron canadensis HOM05D002223 ORTHO05D004187 1.5e-09 67.8 194 26.3
COL.COLO4_14846 Corchorus olitorius HOM05D002223 ORTHO05D004187 1.9e-09 67.4 192 26.0
Lsat_1_v5_gn_0_34660 Lactuca sativa HOM05D002223 ORTHO05D004187 2.5e-09 67.0 194 26.3
Cpa.g.sc26.52 Carica papaya HOM05D002223 ORTHO05D004187 3.3e-09 66.6 196 27.6
MBI09_g14665_MAGBIO Magnolia biondii HOM05D002223 ORTHO05D004187 3.3e-09 66.6 192 28.1
Sopen07g008980 Solanum pennellii HOM05D002223 ORTHO05D004187 3.3e-09 66.6 75 42.7
ATR0810G271 Amborella trichopoda HOM05D002223 ORTHO05D004187 4.3e-09 66.2 192 28.6
Actinidia16991 Actinidia chinensis HOM05D002223 ORTHO05D004187 7.3e-09 65.5 193 27.5
Duzib093G1127 Durio zibethinus HOM05D002223 ORTHO05D004187 1.2e-08 64.7 194 25.3
ECA233G3860 Erigeron canadensis HOM05D002223 ORTHO05D004187 1.2e-08 64.7 194 29.9
Cc10_g01610 Coffea canephora HOM05D002223 ORTHO05D004187 2.1e-08 63.9 195 27.7
Gohir.D01G209400 Gossypium hirsutum HOM05D002223 ORTHO05D004187 2.1e-08 63.9 202 26.7
PGR083G2062 Punica granatum HOM05D000042 ORTHO05D336854 2.1e-08 63.9 61 59.0
ClCG05G018190 Citrullus lanatus HOM05D002223 ORTHO05D004187 2.8e-08 63.5 247 26.7
Sed0017417 Sechium edule HOM05D002223 ORTHO05D004187 2.8e-08 63.5 242 25.6
Gorai.002G254900 Gossypium raimondii HOM05D002223 ORTHO05D004187 3.6e-08 63.2 202 26.7
Dinv39523 Davidia involucrata HOM05D002223 ORTHO05D004187 4.7e-08 62.8 193 26.4
HanXRQChr12g0367211 Helianthus annuus HOM05D002223 ORTHO05D004187 4.7e-08 62.8 193 26.4
Peaxi162Scf00066g00042 Petunia axillaris HOM05D002223 ORTHO05D004187 4.7e-08 62.8 192 26.0
Thecc.05G043400 Theobroma cacao HOM05D002223 ORTHO05D004187 4.7e-08 62.8 194 25.3
CsaV3_3G045920 Cucumis sativus L. HOM05D002223 ORTHO05D004187 8.1e-08 62.0 242 26.0
CAN.G405.10 Capsicum annuum HOM05D002223 ORTHO05D004187 1.1e-07 61.6 239 24.3
Rhsim06G0021000 Rhododendron simsii HOM05D002223 ORTHO05D004187 1.1e-07 61.6 193 26.4
MELO3C003747.2 Cucumis melo HOM05D002223 ORTHO05D004187 1.4e-07 61.2 242 26.0
Dinv31850 Davidia involucrata HOM05D002223 ORTHO05D004187 1.4e-07 61.2 243 26.7
Nitab4.5_0007496g0010 Nicotiana tabacum HOM05D002223 ORTHO05D004187 1.4e-07 61.2 192 25.5
Nitab4.5_0000317g0190 Nicotiana tabacum HOM05D002223 ORTHO05D004187 2.4e-07 60.5 192 25.0
Potri.002G021600 Populus trichocarpa HOM05D002223 ORTHO05D004187 3.1e-07 60.1 221 24.0
Potri.005G240100 Populus trichocarpa HOM05D002223 ORTHO05D004187 4.0e-07 59.7 240 24.2
SMO147G0392 Selaginella moellendorffii HOM05D002223 ORTHO05D004187 4.0e-07 59.7 251 24.3
TWI56G0789 Tripterygium wilfordii HOM05D002223 ORTHO05D004187 4.0e-07 59.7 197 24.9
Manes.05G146700 Manihot esculenta HOM05D002223 ORTHO05D004187 5.2e-07 59.3 194 25.8
RcHm_v2.0_Chr6g0302941 Rosa chinensis HOM05D002223 ORTHO05D004187 5.2e-07 59.3 192 26.0
FAN15G3085 Fragaria x ananassa HOM05D002223 ORTHO05D004187 6.8e-07 58.9 204 24.5
MD15G1011400 Malus domestica HOM05D002223 ORTHO05D004187 6.8e-07 58.9 192 25.0
Mapoly0094s0019 Marchantia polymorpha HOM05D002223 ORTHO05D004187 6.8e-07 58.9 197 24.9
PSO675G8920 Papaver somniferum HOM05D002223 ORTHO05D004187 6.8e-07 58.9 192 26.6
TAR381G1675 Trochodendron aralioides HOM05D002223 ORTHO05D004187 6.8e-07 58.9 192 25.0
GSVIVG01009918001 Vitis vinifera HOM05D002223 ORTHO05D004187 6.8e-07 58.9 192 26.6
Cfa013958 Carpinus fangiana HOM05D002223 ORTHO05D004187 8.9e-07 58.5 198 24.7
CiPaw.07G149100 Carya illinoinensis HOM05D002223 ORTHO05D004187 8.9e-07 58.5 195 24.1
Lj4C797G19 Lonicera japonica HOM05D002223 ORTHO05D004187 8.9e-07 58.5 193 25.4
FvH4_2g38380 Fragaria vesca HOM05D002223 ORTHO05D004187 1.2e-06 58.2 205 25.4
FAN20G1081 Fragaria x ananassa HOM05D002223 ORTHO05D004187 1.2e-06 58.2 204 24.5
FAN27G1205 Fragaria x ananassa HOM05D002223 ORTHO05D004187 1.2e-06 58.2 204 24.5
SalBow7G0163 Salvia bowleyana HOM05D002223 ORTHO05D004187 1.2e-06 58.2 192 25.5
PGSC0003DMG400025317 Solanum tuberosum HOM05D002223 ORTHO05D004187 1.2e-06 58.2 239 23.8
Lj5g0014220 Lotus japonicus HOM05D002223 ORTHO05D004187 1.5e-06 57.8 195 25.6
Phvul.007G136300 Phaseolus vulgaris HOM05D002223 ORTHO05D004187 1.5e-06 57.8 194 24.7
Psat0s1505g0120 Pisum sativum HOM05D002223 ORTHO05D004187 1.5e-06 57.8 193 25.4
QL02p011702 Quercus lobata HOM05D002223 ORTHO05D004187 1.5e-06 57.8 195 25.6
Sabra05G0185600 Salix brachista HOM05D002223 ORTHO05D004187 1.5e-06 57.8 240 25.4
Haze_22640 Corylus avellana HOM05D002223 ORTHO05D004187 2.0e-06 57.4 247 24.7
DCAR_013871 Daucus carota HOM05D002223 ORTHO05D004187 2.0e-06 57.4 193 25.4
Eucgr.F01665 Eucalyptus grandis HOM05D002223 ORTHO05D004187 2.0e-06 57.4 192 26.6
Eucgr.F02660 Eucalyptus grandis HOM05D002223 ORTHO05D004187 2.0e-06 57.4 192 26.6
Lalb_Chr02g0150871 Lupinus albus HOM05D002223 ORTHO05D004187 2.0e-06 57.4 194 25.3
Prupe.1G364600 Prunus persica HOM05D002223 ORTHO05D004187 2.6e-06 57.0 194 25.3
TPR.G13398 Trifolium pratense HOM05D002223 ORTHO05D004187 2.6e-06 57.0 195 24.6
Ciclev10024300m.g Citrus clementina HOM05D002223 ORTHO05D004187 3.4e-06 56.6 199 23.6
Sopen04g025800 Solanum pennellii HOM05D002223 ORTHO05D004187 3.4e-06 56.6 239 23.4
VMungo0720G2762 Vigna mungo HOM05D002223 ORTHO05D004187 3.4e-06 56.6 194 23.7
arahy.Tifrunner.gnm1.ann1.Z5I6I4 Arachis hypogaea HOM05D002223 ORTHO05D004187 4.4e-06 56.2 195 24.6
Ca_10370_v3 Cicer arietinum L. HOM05D002223 ORTHO05D004187 4.4e-06 56.2 193 25.4
Ca_10420_v3 Cicer arietinum L. HOM05D002223 ORTHO05D004187 4.4e-06 56.2 193 25.4
Medtr1g090320 Medicago truncatula HOM05D002223 ORTHO05D004187 4.4e-06 56.2 193 24.9
Glyma.10G194500 Glycine max HOM05D002223 ORTHO05D004187 7.6e-06 55.5 194 25.3
Solyc04g057940.4 Solanum lycopersicum HOM05D002223 ORTHO05D004187 7.6e-06 55.5 239 23.4


User provided reference genes

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