Gene: Cc10_g01610
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc10_g01610
- Transcript Identifier Cc10_g01610.1
- Gene Type Coding gene
- Location chr10 : 1181841-1188627 : positive
Gene Family Information
- ID HOM05D002223
- #Genes/#Species 302/88
- Phylogenetic origin
- ID ORTHO05D004187
- #Genes/#Species 188/74
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB A5BNH0
- UniProtKB B9R899
- UniProtKB D1FP53
- UniProtKB D1FP57
- UniProtKB F6H1L3
- UniProtKB C6L7U1
- id GSCOCG00024644001
Descriptions
- Description Putative E3 ubiquitin-protein ligase LIN-1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR003613 | U box domain |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 26.10.1.9 | External stimuli response.symbiont.symbiosis signalling pathway.ubiquitin E3 ligase (CERBERUS/LIN) |