Gene: PGR142G3208

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G3208
  • Transcript Identifier PGR142G3208.02
  • Gene Type Coding gene
  • Location NC_045128.1 : 10835688-10842854 : negative

Gene Family Information

  • ID HOM05D002223
  • #Genes/#Species 302/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031384356.1
  • name LOC116198145
  • name XM_031528496.1
  • id gene-LOC116198145
  • uniprot A0A6P8CY48

Descriptions

  • product putative E3 ubiquitin-protein ligase LIN-1, transcript variant X4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR016024 Armadillo-type fold
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR003613 U box domain
IPR011989 Armadillo-like helical
Mapman id Description
26.10.1.9 External stimuli response.symbiont.symbiosis signalling pathway.ubiquitin E3 ligase (CERBERUS/LIN)