Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0229251 Helianthus annuus HOM05D000329 ORTHO05D038128 8.2e-49 197.2 138 100.0
HanXRQChr14g0455281 Helianthus annuus HOM05D000329 ORTHO05D000833 2.2e-41 172.6 132 95.5
HanXRQChr07g0194831 Helianthus annuus HOM05D000329 ORTHO05D000833 3.0e-27 125.6 132 55.3
ECA238G1839 Erigeron canadensis HOM05D000329 ORTHO05D000833 5.4e-24 114.8 131 52.7
Lsat_1_v5_gn_2_108161 Lactuca sativa HOM05D000329 ORTHO05D000833 2.3e-22 109.4 138 50.7
Dinv18443 Davidia involucrata HOM05D000329 ORTHO05D000833 7.3e-21 104.4 132 44.7
Lj2A42T56 Lonicera japonica HOM05D000329 ORTHO05D000833 2.6e-18 95.9 131 41.2
Actinidia03305 Actinidia chinensis HOM05D000329 ORTHO05D000833 3.4e-18 95.5 132 41.7
Hma1.2p1_0075F.1_g039240 Hydrangea macrophylla HOM05D000329 ORTHO05D000833 7.5e-18 94.4 131 41.2
Rhsim05G0172700 Rhododendron simsii HOM05D000329 ORTHO05D000833 7.5e-18 94.4 132 42.4
Dinv02198 Davidia involucrata HOM05D000329 ORTHO05D000833 1.7e-17 93.2 131 41.2
vmacro19991 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 5.4e-16 88.2 132 40.2
SalBow3G0167 Salvia bowleyana HOM05D000329 ORTHO05D000833 4.6e-15 85.1 133 40.6
GSVIVG01023517001 Vitis vinifera HOM05D000329 ORTHO05D000833 6.0e-15 84.7 133 39.1
Actinidia39999 Actinidia chinensis HOM05D000329 ORTHO05D038128 1.3e-14 83.6 74 55.4
CiPaw.08G118300 Carya illinoinensis HOM05D000329 ORTHO05D000833 1.3e-14 83.6 142 35.2
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 6.6e-14 81.3 132 37.1
Oeu025619.1 Olea europaea HOM05D000329 ORTHO05D000833 8.6e-14 80.9 131 39.7
Cc02_g08870 Coffea canephora HOM05D000329 ORTHO05D000833 2.5e-13 79.3 131 37.4
QL03p030574 Quercus lobata HOM05D000329 ORTHO05D000833 2.5e-13 79.3 143 35.0
Sc09g0004240 Simmondsia chinensis HOM05D000329 ORTHO05D000833 2.5e-13 79.3 137 37.2
Lsat_1_v5_gn_8_3521 Lactuca sativa HOM05D000329 ORTHO05D000833 3.3e-13 79.0 132 39.4
Solyc04g009990.3 Solanum lycopersicum HOM05D000329 ORTHO05D000833 7.3e-13 77.8 131 34.4
Cfa006346 Carpinus fangiana HOM05D000329 ORTHO05D000833 1.6e-12 76.6 141 34.0
Thecc.05G271200 Theobroma cacao HOM05D000329 ORTHO05D000833 1.6e-12 76.6 138 38.4
CAN.G1609.14 Capsicum annuum HOM05D000329 ORTHO05D000833 2.1e-12 76.3 131 34.4
CAN.G3606.1 Capsicum annuum HOM05D000329 ORTHO05D000833 2.1e-12 76.3 131 34.4
Nitab4.5_0010738g0020 Nicotiana tabacum HOM05D000329 ORTHO05D000833 2.8e-12 75.9 131 36.6
Migut.F00801 Erythranthe guttata HOM05D000329 ORTHO05D000833 3.6e-12 75.5 133 39.1
Sopen04g005120 Solanum pennellii HOM05D000329 ORTHO05D000833 3.6e-12 75.5 131 33.6
Lalb_Chr02g0149521 Lupinus albus HOM05D000329 ORTHO05D000833 6.2e-12 74.7 141 36.2
Nitab4.5_0003780g0120 Nicotiana tabacum HOM05D000329 ORTHO05D000833 8.1e-12 74.3 131 35.9
Lsat_1_v5_gn_0_501 Lactuca sativa HOM05D000329 ORTHO05D000833 1.1e-11 73.9 130 39.2
Glyma.10G171900 Glycine max HOM05D000329 ORTHO05D000833 1.4e-11 73.6 142 34.5
CANSAT54G0692 Cannabis sativa HOM05D000329 ORTHO05D000833 2.3e-11 72.8 142 34.5
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 2.3e-11 72.8 138 39.9
Phvul.007G117400 Phaseolus vulgaris HOM05D000329 ORTHO05D000833 3.1e-11 72.4 142 33.1
Sabra19G0031700 Salix brachista HOM05D000329 ORTHO05D000833 3.1e-11 72.4 138 39.9
Potri.019G018700 Populus trichocarpa HOM05D000329 ORTHO05D000833 4.0e-11 72.0 134 39.6
Potri.013G046700 Populus trichocarpa HOM05D000329 ORTHO05D000833 5.2e-11 71.6 137 37.2
Duzib177G0926 Durio zibethinus HOM05D000329 ORTHO05D000833 6.8e-11 71.2 139 36.7
Lj5g0015689 Lotus japonicus HOM05D000329 ORTHO05D000833 8.9e-11 70.9 139 33.8
COL.COLO4_15474 Corchorus olitorius HOM05D000329 ORTHO05D000833 1.2e-10 70.5 138 36.2
HanXRQChr05g0144941 Helianthus annuus HOM05D000329 ORTHO05D000833 1.2e-10 70.5 133 36.1
MSTRG.8225 Avicennia marina HOM05D000329 ORTHO05D000833 2.0e-10 69.7 131 34.4
Hund06907 Selenicereus undatus HOM05D000329 ORTHO05D000833 2.0e-10 69.7 132 32.6
Atru.chr2.974 Acer truncatum HOM05D000329 ORTHO05D000833 2.6e-10 69.3 137 33.6
Glyma.20G218400 Glycine max HOM05D000329 ORTHO05D000833 5.8e-10 68.2 142 32.4
Nn3g19681 Nelumbo nucifera HOM05D000329 ORTHO05D000833 5.8e-10 68.2 133 38.3
Duzib128G0509 Durio zibethinus HOM05D000329 ORTHO05D000833 7.5e-10 67.8 139 36.0
Oeu014535.1 Olea europaea HOM05D000329 ORTHO05D000833 7.5e-10 67.8 131 35.9
arahy.Tifrunner.gnm1.ann1.WQ4R53 Arachis hypogaea HOM05D000329 ORTHO05D000833 9.8e-10 67.4 142 31.7
VMungo0720G0623 Vigna mungo HOM05D000329 ORTHO05D000833 1.3e-09 67.0 141 34.0
DCAR_018946 Daucus carota HOM05D000329 ORTHO05D000833 2.9e-09 65.9 117 35.9
Gorai.007G276200 Gossypium raimondii HOM05D000329 ORTHO05D000833 2.9e-09 65.9 142 34.5
TAR362G0314 Trochodendron aralioides HOM05D000329 ORTHO05D000833 2.9e-09 65.9 133 33.1
Gohir.D11G257900 Gossypium hirsutum HOM05D000329 ORTHO05D000833 4.9e-09 65.1 141 34.8
unitig_46.g18729 Utricularia gibba HOM05D000329 ORTHO05D000833 4.9e-09 65.1 132 34.1
EL10Ac4g09004 Beta vulgaris HOM05D000329 ORTHO05D000833 6.4e-09 64.7 138 33.3
Lalb_Chr06g0168561 Lupinus albus HOM05D000329 ORTHO05D000833 6.4e-09 64.7 141 32.6
Sabra13G0042700 Salix brachista HOM05D000329 ORTHO05D000833 5.4e-08 61.6 137 35.0
Gohir.A11G247600 Gossypium hirsutum HOM05D000329 ORTHO05D000833 7.1e-08 61.2 141 33.3
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 9.2e-08 60.8 141 31.2
Prupe.6G349900 Prunus persica HOM05D000329 ORTHO05D000833 1.2e-07 60.5 141 31.9
Hund22162 Selenicereus undatus HOM05D000329 ORTHO05D000833 1.2e-07 60.5 132 34.8
Manes.08G139400 Manihot esculenta HOM05D000329 ORTHO05D000833 1.6e-07 60.1 139 33.1
Ah.04g163110 Amaranthus hybridus HOM05D000329 ORTHO05D000833 2.1e-07 59.7 137 29.9
Aqoxy2G03663 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 2.1e-07 59.7 133 33.1
AUR62040922 Chenopodium quinoa HOM05D000329 ORTHO05D000833 2.7e-07 59.3 137 29.2
ECA232G3831 Erigeron canadensis HOM05D000329 ORTHO05D000833 2.7e-07 59.3 129 34.9
FvH4_6g01870 Fragaria vesca HOM05D000329 ORTHO05D000833 2.7e-07 59.3 141 31.2
FAN09G3312 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.7e-07 59.3 141 31.2
FAN14G4488 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.7e-07 59.3 141 31.2
FAN14G5850 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.7e-07 59.3 141 31.2
Psat6g052840 Pisum sativum HOM05D000329 ORTHO05D000833 2.7e-07 59.3 140 30.7
SHI23370 Sapria himalayana HOM05D000329 ORTHO05D000833 2.7e-07 59.3 135 34.1
Ciclev10018536m.g Citrus clementina HOM05D000329 ORTHO05D000833 4.6e-07 58.5 136 32.4
TWI36G0726 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 6.0e-07 58.2 143 32.9
TAR636G2871 Trochodendron aralioides HOM05D000329 ORTHO05D000833 7.8e-07 57.8 132 31.8
AUR62004834 Chenopodium quinoa HOM05D000329 ORTHO05D000833 1.0e-06 57.4 136 29.4
Ca_09959_v3 Cicer arietinum L. HOM05D000329 ORTHO05D000833 1.0e-06 57.4 140 30.7
MD12G1246900 Malus domestica HOM05D000329 ORTHO05D000833 1.3e-06 57.0 79 43.0
RcHm_v2.0_Chr3g0449611 Rosa chinensis HOM05D000329 ORTHO05D000833 1.7e-06 56.6 64 45.3
Sed0008276 Sechium edule HOM05D000329 ORTHO05D000833 1.7e-06 56.6 139 30.9
TPR.G10536 Trifolium pratense HOM05D000329 ORTHO05D000833 1.7e-06 56.6 140 29.3
Aa31sc454G10 Aethionema arabicum HOM05D000329 ORTHO05D000833 2.3e-06 56.2 79 48.1
Eucgr.B02147 Eucalyptus grandis HOM05D000329 ORTHO05D000833 3.0e-06 55.8 84 42.9
BcaB03g13323 Brassica carinata HOM05D000329 ORTHO05D000833 5.1e-06 55.1 82 43.9


User provided reference genes

Program Settings