Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 3.1e-162 575.1 296 100.0
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 8.3e-115 417.5 300 75.7
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 1.7e-96 356.7 290 66.6
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.2e-84 317.4 311 57.9
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.5e-76 290.4 235 63.0
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 2.0e-76 290.0 303 56.1
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 1.4e-74 283.9 319 52.7
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 2.4e-74 283.1 236 62.3
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 5.5e-74 282.0 301 52.8
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 3.3e-71 272.7 303 53.8
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 7.4e-71 271.6 290 53.4
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 1.6e-70 270.4 310 51.6
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 1.6e-70 270.4 306 50.0
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 2.1e-70 270.0 306 51.3
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 3.7e-70 269.2 295 53.9
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 1.8e-69 266.9 313 50.5
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 1.8e-69 266.9 288 50.7
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 1.8e-69 266.9 294 53.7
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 5.3e-69 265.4 315 49.2
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 5.3e-69 265.4 288 50.7
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 5.8e-68 261.9 284 51.4
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 7.6e-68 261.5 293 51.5
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 1.0e-67 261.2 301 50.8
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 1.3e-67 260.8 292 52.4
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.9e-67 259.6 298 51.3
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 3.8e-67 259.2 303 48.5
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 3.8e-67 259.2 290 52.1
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 3.8e-67 259.2 302 48.7
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 4.9e-67 258.8 311 47.9
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 8.4e-67 258.1 253 54.2
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 1.4e-66 257.3 305 49.5
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 3.2e-66 256.1 311 48.2
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 4.2e-66 255.8 311 47.9
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 7.1e-66 255.0 293 50.5
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 1.6e-65 253.8 304 50.3
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 1.6e-65 253.8 311 49.8
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 6.0e-65 251.9 254 53.9
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 1.8e-64 250.4 305 50.2
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 3.9e-64 249.2 253 53.4
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 8.7e-64 248.1 303 48.2
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 1.3e-62 244.2 277 53.4
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 2.1e-62 243.4 291 49.5
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 4.8e-62 242.3 295 49.8
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 1.4e-61 240.7 277 49.5
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 1.8e-61 240.4 277 49.5
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 3.1e-61 239.6 306 48.4
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 3.4e-60 236.1 252 50.0
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 3.4e-60 236.1 296 47.6
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 7.6e-60 235.0 290 48.3
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 7.6e-60 235.0 292 46.9
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 1.7e-59 233.8 302 48.7
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 1.7e-59 233.8 283 49.8
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 6.5e-59 231.9 298 47.0
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 6.5e-59 231.9 243 51.9
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 8.5e-59 231.5 271 49.1
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 1.9e-58 230.3 300 48.3
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 1.9e-58 230.3 225 54.7
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 7.2e-58 228.4 295 47.5
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 7.2e-58 228.4 281 49.1
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 6.1e-57 225.3 303 46.9
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 1.8e-56 223.8 230 55.2
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 3.0e-56 223.0 230 55.2
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 3.9e-56 222.6 303 48.2
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 5.1e-56 222.2 294 45.9
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 6.7e-56 221.9 302 46.4
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 6.7e-56 221.9 274 49.3
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 8.7e-56 221.5 249 50.2
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 1.5e-55 220.7 299 44.8
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 1.9e-55 220.3 301 46.5
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 2.5e-55 219.9 304 46.1
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 3.3e-55 219.5 304 47.0
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.6e-54 217.2 297 45.8
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 3.7e-54 216.1 307 45.6
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 2.4e-53 213.4 286 47.6
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 9.1e-53 211.5 285 46.7
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 9.1e-53 211.5 247 49.0
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 1.2e-52 211.1 218 52.3
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 1.2e-52 211.1 254 48.8
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 1.5e-52 210.7 301 46.5
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 4.5e-52 209.1 233 49.8
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 7.7e-52 208.4 305 45.2
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 1.0e-51 208.0 269 45.0
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 1.3e-51 207.6 204 53.9
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 1.7e-51 207.2 271 48.0
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 2.9e-51 206.5 271 47.6
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 5.0e-51 205.7 204 52.9
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 8.5e-51 204.9 299 43.5
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 2.1e-49 200.3 299 41.1
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 3.6e-49 199.5 297 40.4
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 2.3e-48 196.8 240 47.5
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 2.0e-47 193.7 289 41.2
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 1.0e-43 181.4 312 41.7
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 1.4e-42 177.6 304 40.1
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 1.2e-41 174.5 257 44.7
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 6.1e-41 172.2 262 43.1
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 2.3e-40 170.2 222 41.9
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 5.7e-39 165.6 184 49.5
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 1.3e-38 164.5 240 46.7
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 2.8e-38 163.3 235 41.3
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 6.3e-38 162.2 202 46.0
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 2.9e-35 153.3 243 42.8
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 7.2e-34 148.7 191 46.6
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 2.7e-33 146.7 125 59.2
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 4.7e-33 146.0 129 55.0
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 4.7e-33 146.0 294 35.7
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 1.8e-32 144.1 240 41.2
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 2.3e-32 143.7 262 38.5
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 3.0e-32 143.3 231 42.4
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 5.2e-32 142.5 248 40.7
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 6.3e-30 135.6 110 59.1
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 2.4e-29 133.7 245 37.1
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 2.0e-28 130.6 285 37.2
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 2.2e-27 127.1 101 61.4
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 6.5e-27 125.6 211 37.0
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 5.5e-26 122.5 287 31.4
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 1.2e-25 121.3 253 33.6
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 3.4e-23 113.2 241 33.6
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 1.3e-22 111.3 114 50.9
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 5.9e-20 102.4 67 74.6
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 5.9e-20 102.4 67 74.6
Sc15g0002680 Simmondsia chinensis HOM05D005876 ORTHO05D007326 1.7e-19 100.9 196 37.2
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 8.6e-19 98.6 280 30.0
TPR.G5312 Trifolium pratense HOM05D005876 ORTHO05D007326 8.0e-17 92.0 120 44.2
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 6.8e-16 89.0 65 64.6
Oeu029421.1 Olea europaea HOM05D005876 ORTHO05D007326 5.9e-12 75.9 83 50.6
CBR_g48398 Chara braunii HOM05D005876 ORTHO05D007326 1.8e-08 64.3 135 33.3
Cfa025603 Carpinus fangiana HOM05D005876 ORTHO05D007326 2.6e-07 60.5 150 28.0


User provided reference genes

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