Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 3.7e-168 594.7 292 100.0
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 7.6e-129 464.2 243 91.8
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.3e-120 436.8 241 84.6
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 1.0e-117 427.2 243 82.3
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 7.4e-116 421.0 243 78.6
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 4.5e-113 411.8 243 78.2
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 5.9e-113 411.4 244 79.1
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 7.7e-113 411.0 244 79.9
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 1.3e-112 410.2 244 78.7
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.3e-112 410.2 244 78.7
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 1.3e-112 410.2 243 77.4
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 2.2e-112 409.5 243 78.6
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 2.2e-112 409.5 243 79.0
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 2.9e-112 409.1 243 77.0
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 3.8e-112 408.7 243 78.6
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 5.0e-112 408.3 241 77.6
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 6.5e-112 407.9 243 78.6
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 8.5e-112 407.5 244 78.7
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 3.2e-111 405.6 243 78.6
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 3.2e-111 405.6 244 77.5
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 4.2e-111 405.2 245 77.6
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 1.2e-110 403.7 242 77.3
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 1.6e-110 403.3 242 77.7
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 2.1e-110 402.9 243 76.5
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 2.1e-110 402.9 276 69.9
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.7e-110 401.7 243 76.5
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 6.1e-110 401.4 243 77.4
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 7.9e-110 401.0 243 75.3
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.3e-109 399.4 243 76.1
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 3.0e-109 399.1 244 76.2
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 3.0e-109 399.1 258 72.9
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 3.9e-109 398.7 242 75.2
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 3.9e-109 398.7 228 81.6
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 8.8e-109 397.5 242 76.4
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.1e-108 397.1 242 74.4
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 1.1e-108 397.1 244 75.0
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.5e-108 396.7 243 74.9
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 2.6e-108 396.0 243 75.7
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 2.6e-108 396.0 244 74.6
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 4.4e-108 395.2 244 75.8
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 5.7e-108 394.8 241 75.1
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 7.4e-108 394.4 244 76.2
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 7.4e-108 394.4 244 75.4
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 7.4e-108 394.4 244 75.4
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 7.4e-108 394.4 281 68.7
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 1.3e-107 393.7 242 76.4
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 1.7e-107 393.3 244 74.2
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 4.8e-107 391.7 244 75.4
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.8e-107 391.7 243 74.5
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 1.8e-106 389.8 241 75.1
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.8e-106 389.8 241 75.1
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 2.4e-106 389.4 243 74.9
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 7.0e-106 387.9 243 74.1
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 7.0e-106 387.9 284 66.5
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 7.0e-106 387.9 295 63.7
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 9.1e-106 387.5 241 73.4
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 2.0e-105 386.3 230 77.0
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 2.6e-105 386.0 244 73.4
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 3.5e-105 385.6 241 74.7
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 7.7e-105 384.4 241 73.4
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 7.7e-105 384.4 242 74.4
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 1.0e-104 384.0 242 73.6
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 1.0e-104 384.0 242 73.6
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 1.3e-104 383.6 241 73.4
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 1.3e-104 383.6 242 73.6
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 2.9e-104 382.5 242 73.6
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 3.8e-104 382.1 243 71.2
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 8.5e-104 380.9 241 73.9
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 8.5e-104 380.9 243 71.6
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 8.5e-104 380.9 244 73.4
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 8.5e-104 380.9 244 73.0
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 1.1e-103 380.6 242 73.1
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 1.5e-103 380.2 244 71.3
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 2.5e-103 379.4 253 71.1
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 5.5e-103 378.3 243 71.2
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 9.4e-103 377.5 327 59.6
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 1.2e-102 377.1 244 70.5
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 3.6e-102 375.6 243 71.6
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 3.6e-102 375.6 241 71.8
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.0e-101 374.0 252 71.0
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 2.3e-101 372.9 230 76.5
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 2.3e-101 372.9 229 77.3
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 6.7e-101 371.3 244 72.1
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 8.8e-101 370.9 243 69.5
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 7.5e-100 367.9 243 69.1
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 9.7e-100 367.5 244 70.5
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 1.7e-99 366.7 244 70.5
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 2.8e-99 365.9 244 70.9
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 1.2e-97 360.5 247 69.2
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 1.6e-94 350.1 214 75.2
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 2.7e-94 349.4 208 76.9
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 5.2e-93 345.1 244 67.6
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 1.2e-92 344.0 279 57.7
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.5e-87 327.0 204 74.0
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 4.7e-86 322.0 205 72.2
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 1.8e-85 320.1 205 72.7
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 4.0e-85 318.9 268 56.3
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.2e-84 317.4 300 54.3
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.9e-83 312.0 243 62.6
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 8.3e-83 311.2 227 67.4
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.4e-82 310.5 244 61.1
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 1.2e-78 297.4 250 54.8
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 3.1e-69 266.2 316 44.3
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 1.7e-64 250.4 260 48.5
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 1.7e-64 250.4 247 52.6
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 7.1e-58 228.4 250 48.0
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 3.0e-56 223.0 339 41.3
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 8.6e-56 221.5 262 45.4
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 5.2e-53 212.2 253 44.3
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.9e-51 206.5 127 77.2
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.5e-49 199.5 147 66.7
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 1.2e-46 191.0 110 74.5
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 7.3e-39 165.2 120 65.8
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.9e-35 153.3 83 75.9
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.1e-34 151.4 96 74.0
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.1e-23 114.8 83 68.7
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.1e-23 114.8 83 68.7
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 6.2e-22 109.0 57 78.9
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.5e-20 102.8 75 69.3
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 3.2e-18 96.7 61 70.5
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 2.7e-17 93.6 69 62.3
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 2.6e-12 77.0 49 67.3
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 4.5e-12 76.3 109 41.3
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 1.3e-11 74.7 49 65.3
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 1.3e-11 74.7 49 65.3
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 3.2e-10 70.1 109 33.9
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 2.1e-09 67.4 43 65.1
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 2.1e-09 67.4 37 78.4
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 9.7e-07 58.5 38 63.2
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 2.2e-06 57.4 70 40.0
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 3.7e-06 56.6 77 37.7
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 8.2e-06 55.5 65 41.5


User provided reference genes

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