Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 1.3e-58 229.6 116 100.0
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 1.2e-56 223.0 115 96.5
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 3.2e-54 214.9 115 93.0
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 2.2e-50 202.2 115 87.8
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 2.6e-48 195.3 115 84.3
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 7.7e-48 193.7 115 82.6
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 5.5e-38 161.0 135 62.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.2e-37 159.8 135 63.0
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.7e-37 158.7 134 62.7
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 6.1e-37 157.5 133 60.9
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 1.0e-36 156.8 128 62.5
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.0e-36 156.8 133 60.9
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.8e-36 156.0 135 62.2
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 2.3e-36 155.6 135 60.7
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 5.1e-36 154.5 135 59.3
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 2.0e-35 152.5 127 62.2
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 4.4e-35 151.4 127 62.2
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 4.4e-35 151.4 127 62.2
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 5.7e-35 151.0 128 63.3
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 7.4e-35 150.6 134 59.0
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 9.7e-35 150.2 135 55.6
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 1.3e-34 149.8 128 60.2
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 1.3e-34 149.8 148 56.1
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 1.7e-34 149.4 127 62.2
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 3.7e-34 148.3 131 58.0
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 3.7e-34 148.3 135 57.8
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 6.3e-34 147.5 127 60.6
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 8.2e-34 147.1 127 62.2
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 8.2e-34 147.1 128 61.7
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.1e-33 146.7 116 63.8
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 1.1e-33 146.7 135 57.0
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 1.4e-33 146.4 132 59.1
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.4e-33 146.4 135 56.3
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.4e-33 146.4 135 56.3
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 1.4e-33 146.4 135 57.8
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.8e-33 146.0 135 57.8
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 2.4e-33 145.6 137 56.2
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 3.1e-33 145.2 132 59.1
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 4.1e-33 144.8 125 61.6
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 5.3e-33 144.4 135 57.0
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 5.3e-33 144.4 139 57.6
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 7.0e-33 144.1 128 60.2
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 9.1e-33 143.7 125 60.8
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 9.1e-33 143.7 125 60.8
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 1.2e-32 143.3 125 61.6
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 1.5e-32 142.9 125 60.0
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 2.6e-32 142.1 135 56.3
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 2.6e-32 142.1 137 56.2
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 3.5e-32 141.7 116 63.8
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 3.5e-32 141.7 134 58.2
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 3.5e-32 141.7 135 54.1
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 3.5e-32 141.7 128 58.6
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.5e-32 141.4 149 53.7
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 7.7e-32 140.6 116 62.1
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 7.7e-32 140.6 132 57.6
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 7.7e-32 140.6 118 61.9
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 7.7e-32 140.6 136 56.6
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 1.0e-31 140.2 126 59.5
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 2.2e-31 139.0 125 59.2
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 2.2e-31 139.0 132 56.8
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.9e-31 138.7 126 56.3
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 2.9e-31 138.7 133 57.9
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 3.8e-31 138.3 135 54.8
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 3.8e-31 138.3 136 56.6
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 3.8e-31 138.3 118 61.0
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 5.0e-31 137.9 125 60.8
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 5.0e-31 137.9 125 60.8
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 5.0e-31 137.9 125 60.8
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 5.0e-31 137.9 125 60.8
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 5.0e-31 137.9 125 60.8
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 5.0e-31 137.9 126 57.1
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.0e-31 137.9 126 57.1
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 5.0e-31 137.9 133 56.4
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 5.0e-31 137.9 135 55.6
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 5.0e-31 137.9 136 58.1
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 6.5e-31 137.5 126 55.6
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 6.5e-31 137.5 133 56.4
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 6.5e-31 137.5 125 60.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.1e-30 136.7 135 54.8
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 1.5e-30 136.3 136 56.6
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 1.9e-30 136.0 130 55.4
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.9e-30 136.0 130 58.5
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.9e-30 136.0 135 54.8
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.2e-30 135.2 117 59.8
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 5.5e-30 134.4 137 54.7
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 5.5e-30 134.4 130 53.8
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 7.2e-30 134.0 117 59.0
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 7.2e-30 134.0 133 55.6
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 9.4e-30 133.7 136 55.1
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.6e-29 132.9 135 51.9
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 2.1e-29 132.5 117 58.1
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.1e-29 132.5 121 57.0
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.7e-29 132.1 126 54.0
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.7e-29 132.1 148 50.7
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 3.6e-29 131.7 138 54.3
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 3.6e-29 131.7 134 57.5
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 4.7e-29 131.3 129 56.6
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 4.7e-29 131.3 139 54.7
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 4.7e-29 131.3 130 56.2
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 6.1e-29 131.0 135 51.1
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 6.1e-29 131.0 138 54.3
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 6.1e-29 131.0 135 51.1
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 1.0e-28 130.2 133 50.4
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.4e-28 129.8 134 52.2
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.4e-28 129.8 117 59.8
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.4e-28 129.8 117 59.8
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.4e-28 129.8 138 54.3
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 3.9e-28 128.3 149 49.0
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 3.9e-28 128.3 148 48.6
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 5.2e-28 127.9 118 57.6
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 5.2e-28 127.9 132 55.3
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 6.7e-28 127.5 116 57.8
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 1.5e-27 126.3 137 52.6
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.0e-27 125.9 132 55.3
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 2.6e-27 125.6 122 54.9
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 3.3e-27 125.2 133 52.6
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 4.4e-27 124.8 137 50.4
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 5.7e-27 124.4 119 55.5
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 7.4e-27 124.0 125 55.2
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 4.8e-26 121.3 129 52.7
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.1e-25 120.2 115 54.8
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 2.6e-24 115.5 111 57.7
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 3.5e-24 115.2 115 55.7
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.2e-23 112.5 117 53.0
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 2.2e-23 112.5 125 52.0
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 1.1e-22 110.2 117 51.3
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 8.3e-18 94.0 144 40.3
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 3.1e-17 92.0 152 38.8
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 5.9e-16 87.8 113 46.9
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 1.6e-13 79.7 147 36.1
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.6e-13 79.7 54 64.8
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.6e-13 79.7 56 62.5
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 8.0e-13 77.4 104 47.1
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 1.4e-12 76.6 124 37.9
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 8.8e-12 73.9 118 43.2
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.0e-11 72.8 115 41.7
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 2.6e-11 72.4 72 44.4
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 7.5e-11 70.9 60 55.0
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 1.1e-09 67.0 85 36.5
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 4.5e-08 61.6 55 54.5
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 5.0e-07 58.2 53 58.5
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.9e-06 56.2 114 35.1
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 4.2e-06 55.1 101 38.6


User provided reference genes

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