Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.8e-139 498.8 294 100.0
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.1e-98 364.0 302 77.2
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 7.3e-95 351.3 245 82.9
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.3e-79 299.3 261 70.5
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 9.5e-79 297.7 231 75.8
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.6e-78 297.0 302 63.9
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 2.8e-78 296.2 230 77.0
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 2.3e-77 293.1 230 77.4
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 2.2e-75 286.6 293 63.1
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 4.9e-75 285.4 301 62.8
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 8.4e-75 284.6 260 66.5
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.4e-74 283.9 266 64.7
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.4e-74 283.1 296 61.1
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 9.2e-74 281.2 245 71.8
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 3.5e-73 279.3 230 74.3
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 3.0e-72 276.2 272 60.3
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.1e-71 274.2 243 61.3
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 2.5e-71 273.1 271 60.5
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 4.3e-71 272.3 231 75.8
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.6e-70 270.4 293 54.9
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 3.6e-70 269.2 240 71.7
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 6.2e-70 268.5 245 69.4
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 8.1e-70 268.1 243 65.8
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.8e-69 266.9 275 64.7
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 4.0e-69 265.8 253 64.4
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.7e-67 260.4 295 61.4
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 2.9e-67 259.6 225 64.9
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.9e-67 259.6 223 61.9
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 3.8e-67 259.2 292 57.5
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 4.9e-67 258.8 354 49.7
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 4.9e-67 258.8 216 64.8
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 8.4e-67 258.1 231 66.2
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.1e-66 257.7 265 60.0
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.7e-65 253.1 168 81.5
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.9e-64 249.2 269 65.4
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 3.9e-64 249.2 230 70.9
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 6.6e-64 248.4 253 67.6
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 5.6e-63 245.4 232 60.3
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 9.6e-63 244.6 272 52.9
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 9.6e-63 244.6 243 67.1
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 1.3e-62 244.2 240 67.9
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.6e-62 243.8 170 80.0
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.6e-62 243.8 298 58.4
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 3.6e-62 242.7 253 58.5
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 4.8e-62 242.3 249 57.4
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 6.2e-62 241.9 253 58.9
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 6.2e-62 241.9 293 60.8
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.1e-61 241.1 221 71.9
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.1e-61 241.1 288 60.1
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.1e-61 241.1 288 60.1
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 2.4e-61 240.0 306 58.5
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.1e-61 239.6 299 55.9
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 4.0e-61 239.2 286 52.1
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 9.0e-61 238.0 287 51.6
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 9.0e-61 238.0 287 51.6
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 9.0e-61 238.0 287 51.6
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 1.5e-60 237.3 228 68.9
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.0e-60 236.9 159 67.9
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 2.0e-60 236.9 247 68.8
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 3.4e-60 236.1 286 51.4
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 4.5e-60 235.7 244 58.2
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 5.8e-60 235.3 250 64.4
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 5.8e-60 235.3 284 53.9
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 7.6e-60 235.0 284 53.9
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 7.6e-60 235.0 226 69.0
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.3e-59 234.2 235 65.5
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 3.8e-59 232.6 213 74.6
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.1e-58 231.1 237 58.2
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.4e-58 230.7 200 58.0
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.2e-58 229.6 265 61.9
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.2e-58 229.6 238 58.4
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.1e-58 228.4 252 56.7
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 9.3e-58 228.0 239 55.6
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 3.5e-57 226.1 290 55.9
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 4.6e-57 225.7 232 61.2
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 6.0e-57 225.3 235 64.7
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 6.7e-56 221.9 308 50.6
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 3.3e-55 219.5 231 61.5
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 7.4e-55 218.4 215 68.8
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 3.6e-54 216.1 247 55.9
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.4e-53 214.2 218 57.8
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.2e-52 211.1 333 46.8
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 3.4e-52 209.5 224 63.4
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 1.1e-50 204.5 241 60.6
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 6.0e-49 198.7 164 69.5
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.0e-48 198.0 178 62.9
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 5.1e-48 195.7 316 41.8
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.5e-47 193.4 307 50.5
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 3.3e-47 193.0 225 62.2
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 7.4e-47 191.8 218 59.2
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 2.8e-46 189.9 265 49.8
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 4.0e-45 186.0 163 58.3
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 5.3e-45 185.7 270 53.0
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 6.9e-45 185.3 224 59.8
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 5.8e-44 182.2 220 56.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 7.6e-44 181.8 317 45.4
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 8.4e-43 178.3 166 58.4
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.5e-42 176.8 214 61.7
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.5e-42 176.8 214 61.7
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 4.2e-42 176.0 195 57.9
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 6.0e-41 172.2 185 57.8
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 3.3e-39 166.4 224 53.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.7e-39 165.6 292 41.8
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 8.2e-38 161.8 125 64.0
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.4e-37 161.0 126 78.6
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 7.6e-36 155.2 168 56.0
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.9e-34 150.6 144 54.2
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 3.6e-33 146.4 100 84.0
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 1.5e-31 141.0 255 50.2
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.1e-29 133.3 224 42.9
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.5e-28 131.0 123 55.3
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.9e-26 124.0 277 39.7
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.5e-18 97.1 105 63.8
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 9.4e-18 95.1 213 39.0
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 4.7e-17 92.8 96 53.1
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 2.6e-12 77.0 104 48.1
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 7.7e-12 75.5 43 76.7
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 3.7e-06 56.6 190 27.4
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 4.8e-06 56.2 36 69.4


User provided reference genes

Program Settings