Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0115181 Helianthus annuus HOM05D002863 ORTHO05D005691 1.0e-93 346.7 168 100.0
ECA236G4457 Erigeron canadensis HOM05D002863 ORTHO05D005691 2.2e-40 169.5 150 55.3
Lsat_1_v5_gn_9_80360 Lactuca sativa HOM05D002863 ORTHO05D005691 1.1e-39 167.2 171 50.9
Nitab4.5_0000321g0190 Nicotiana tabacum HOM05D002863 ORTHO05D005691 2.4e-34 149.4 157 52.2
Nitab4.5_0006783g0030 Nicotiana tabacum HOM05D002863 ORTHO05D005691 4.1e-34 148.7 157 52.2
MELO3C012664.2 Cucumis melo HOM05D002863 ORTHO05D005691 2.0e-33 146.4 154 46.8
CsaV3_7G022380 Cucumis sativus L. HOM05D002863 ORTHO05D005691 2.0e-33 146.4 154 46.8
Peaxi162Scf00131g00027 Petunia axillaris HOM05D002863 ORTHO05D005691 2.7e-33 146.0 157 51.0
Lj3E732T0 Lonicera japonica HOM05D002863 ORTHO05D005691 3.5e-33 145.6 160 47.5
ClCG06G006340 Citrullus lanatus HOM05D002863 ORTHO05D005691 4.5e-33 145.2 154 47.4
Sopen06g019210 Solanum pennellii HOM05D002863 ORTHO05D005691 1.3e-32 143.7 159 48.4
Oeu018974.1 Olea europaea HOM05D002863 ORTHO05D005691 1.7e-32 143.3 155 51.6
Cc03_g04040 Coffea canephora HOM05D002863 ORTHO05D005691 2.2e-32 142.9 155 52.3
Solyc06g054050.3 Solanum lycopersicum HOM05D002863 ORTHO05D005691 2.2e-32 142.9 159 48.4
PGSC0003DMG400016310 Solanum tuberosum HOM05D002863 ORTHO05D005691 2.2e-32 142.9 160 48.8
CSS0007282 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 2.9e-32 142.5 154 49.4
PGSC0003DMG400016265 Solanum tuberosum HOM05D002863 ORTHO05D005691 3.8e-32 142.1 151 50.3
CSS0000686 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 5.0e-32 141.7 154 49.4
CSS0037612 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 5.0e-32 141.7 154 48.7
Solyc06g054020.3 Solanum lycopersicum HOM05D002863 ORTHO05D005691 5.0e-32 141.7 160 48.1
Aqoxy5G00438 Aquilegia oxysepala HOM05D002863 ORTHO05D005691 6.5e-32 141.4 154 48.7
CAN.G231.13 Capsicum annuum HOM05D002863 ORTHO05D005691 6.5e-32 141.4 158 48.7
Sopen06g019190 Solanum pennellii HOM05D002863 ORTHO05D005691 6.5e-32 141.4 160 47.5
Sed0023639 Sechium edule HOM05D002863 ORTHO05D005691 8.5e-32 141.0 154 44.2
COL.COLO4_13640 Corchorus olitorius HOM05D002863 ORTHO05D005691 2.5e-31 139.4 154 46.1
Dinv14015 Davidia involucrata HOM05D002863 ORTHO05D005691 2.5e-31 139.4 159 46.5
CSS0024605 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 5.5e-31 138.3 158 44.9
CSS0027055 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 5.5e-31 138.3 158 44.9
Dinv17741 Davidia involucrata HOM05D002863 ORTHO05D005691 5.5e-31 138.3 154 46.1
PSO210G3945 Papaver somniferum HOM05D002863 ORTHO05D005691 5.5e-31 138.3 154 46.8
PSO832G1692 Papaver somniferum HOM05D002863 ORTHO05D005691 5.5e-31 138.3 154 46.8
Migut.G00361 Erythranthe guttata HOM05D002863 ORTHO05D005691 7.2e-31 137.9 155 47.1
CSS0031002 Camellia sinensis var. sinensis HOM05D002863 ORTHO05D005691 2.1e-30 136.3 150 45.3
Cc02_g31310 Coffea canephora HOM05D002863 ORTHO05D005691 2.1e-30 136.3 154 44.8
RcHm_v2.0_Chr4g0415581 Rosa chinensis HOM05D002863 ORTHO05D005691 1.4e-29 133.7 157 46.5
Nn1g02374 Nelumbo nucifera HOM05D002863 ORTHO05D005691 2.3e-29 132.9 154 44.2
Gohir.D11G266600 Gossypium hirsutum HOM05D002863 ORTHO05D005691 3.0e-29 132.5 154 46.1
HanXRQChr04g0095851 Helianthus annuus HOM05D002863 ORTHO05D005691 3.0e-29 132.5 109 59.6
Potri.005G047500 Populus trichocarpa HOM05D002863 ORTHO05D005691 5.2e-29 131.7 154 44.8
GSVIVG01018011001 Vitis vinifera HOM05D002863 ORTHO05D005691 5.2e-29 131.7 154 45.5
SGA_v2.0_scaffold191G40493 Striga asiatica HOM05D002863 ORTHO05D005691 6.8e-29 131.3 155 45.8
Gohir.A11G256800 Gossypium hirsutum HOM05D002863 ORTHO05D005691 8.8e-29 131.0 154 45.5
Cpa.g.sc117.40 Carica papaya HOM05D002863 ORTHO05D005691 1.5e-28 130.2 150 46.7
Duzib177G0218 Durio zibethinus HOM05D002863 ORTHO05D005691 2.0e-28 129.8 154 44.8
SalBow2G0283 Salvia bowleyana HOM05D002863 ORTHO05D005691 2.0e-28 129.8 155 43.2
TWI12G1273 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 4.4e-28 128.6 154 43.5
DCAR_002375 Daucus carota HOM05D002863 ORTHO05D005691 7.5e-28 127.9 159 44.7
Gorai.007G286400 Gossypium raimondii HOM05D002863 ORTHO05D005691 7.5e-28 127.9 155 45.8
Thecc.04G235200 Theobroma cacao HOM05D002863 ORTHO05D005691 7.5e-28 127.9 154 42.9
TWI53G0907 Tripterygium wilfordii HOM05D002863 ORTHO05D005691 9.8e-28 127.5 154 43.5
Rhsim04G0200000 Rhododendron simsii HOM05D002863 ORTHO05D005691 1.3e-27 127.1 154 45.5
TAR636G1187 Trochodendron aralioides HOM05D002863 ORTHO05D005691 1.3e-27 127.1 154 44.8
Thecc.05G291200 Theobroma cacao HOM05D002863 ORTHO05D005691 2.2e-27 126.3 154 45.5
Duzib151G1175 Durio zibethinus HOM05D002863 ORTHO05D005691 8.3e-27 124.4 154 42.9
CANSAT78G2191 Cannabis sativa HOM05D002863 ORTHO05D005691 1.1e-26 124.0 154 40.3
Nitab4.5_0002361g0230 Nicotiana tabacum HOM05D002863 ORTHO05D005691 1.1e-26 124.0 154 43.5
PGR004G0456 Punica granatum HOM05D002863 ORTHO05D005691 1.1e-26 124.0 154 40.3
Thhalv10006684m.g Eutrema salsugineum HOM05D002863 ORTHO05D005691 2.4e-26 122.9 156 43.6
MD13G1196500 Malus domestica HOM05D002863 ORTHO05D005691 4.1e-26 122.1 162 42.0
Aa31LG1G19180 Aethionema arabicum HOM05D002863 ORTHO05D005691 7.0e-26 121.3 154 42.2
Prupe.1G017300 Prunus persica HOM05D002863 ORTHO05D005691 9.1e-26 120.9 157 45.2
MBI05_g12094_MAGBIO Magnolia biondii HOM05D002863 ORTHO05D005691 1.2e-25 120.6 168 39.3
Sp1g04340 Schrenkiella parvula HOM05D002863 ORTHO05D005691 1.2e-25 120.6 156 42.9
CiPaw.01G198300 Carya illinoinensis HOM05D002863 ORTHO05D005691 2.0e-25 119.8 154 42.2
Gorai.006G240800 Gossypium raimondii HOM05D002863 ORTHO05D005691 3.5e-25 119.0 154 42.9
THA.LOC104800956 Tarenaya hassleriana HOM05D002863 ORTHO05D005691 3.5e-25 119.0 154 42.2
Eucgr.H03436 Eucalyptus grandis HOM05D002863 ORTHO05D005691 4.5e-25 118.6 154 40.3
Lalb_Chr16g0376481 Lupinus albus HOM05D002863 ORTHO05D005691 4.5e-25 118.6 152 40.8
Cfa008472 Carpinus fangiana HOM05D002863 ORTHO05D005691 1.0e-24 117.5 154 42.2
FvH4_4g15972 Fragaria vesca HOM05D002863 ORTHO05D005691 1.0e-24 117.5 157 42.7
FAN12G0500 Fragaria x ananassa HOM05D002863 ORTHO05D005691 1.0e-24 117.5 157 42.7
arahy.Tifrunner.gnm1.ann1.IF8NHZ Arachis hypogaea HOM05D002863 ORTHO05D005691 1.3e-24 117.1 153 41.8
arahy.Tifrunner.gnm1.ann1.SX262Z Arachis hypogaea HOM05D002863 ORTHO05D005691 1.3e-24 117.1 153 43.1
CDE06G1398 Ceratophyllum demersum HOM05D002863 ORTHO05D005691 1.7e-24 116.7 158 38.6
AL1G15300 Arabidopsis lyrata HOM05D002863 ORTHO05D005691 2.2e-24 116.3 156 41.7
AUR62005129 Chenopodium quinoa HOM05D002863 ORTHO05D005691 2.2e-24 116.3 154 42.2
COL.COLO4_21516 Corchorus olitorius HOM05D002863 ORTHO05D005691 2.2e-24 116.3 151 42.4
FAN07G0972 Fragaria x ananassa HOM05D002863 ORTHO05D005691 2.2e-24 116.3 157 42.0
Manes.03G175900 Manihot esculenta HOM05D002863 ORTHO05D005691 2.2e-24 116.3 154 40.9
Psat2g190040 Pisum sativum HOM05D002863 ORTHO05D005691 2.2e-24 116.3 154 42.9
Haze_11201 Corylus avellana HOM05D002863 ORTHO05D005691 2.9e-24 115.9 154 40.9
Gohir.D09G219800 Gossypium hirsutum HOM05D002863 ORTHO05D005691 2.9e-24 115.9 154 42.2
Sc13g0004580 Simmondsia chinensis HOM05D002863 ORTHO05D005691 2.9e-24 115.9 154 42.9
Ciclev10004283m.g Citrus clementina HOM05D002863 ORTHO05D005691 3.8e-24 115.5 150 44.7
BcaC05g24383 Brassica carinata HOM05D002863 ORTHO05D005691 5.0e-24 115.2 156 41.7
C05p03810 Brassica napus HOM05D002863 ORTHO05D005691 5.0e-24 115.2 156 41.7
BolC5t29158H Brassica oleracea HOM05D002863 ORTHO05D005691 5.0e-24 115.2 156 41.7
BcaB02g06857 Brassica carinata HOM05D002863 ORTHO05D005691 6.5e-24 114.8 156 41.0
Atru.chr4.2430 Acer truncatum HOM05D002863 ORTHO05D005691 8.5e-24 114.4 154 42.2
ATR0665G272 Amborella trichopoda HOM05D002863 ORTHO05D005691 8.5e-24 114.4 150 40.0
Eucgr.H04399 Eucalyptus grandis HOM05D002863 ORTHO05D005691 8.5e-24 114.4 150 42.7
FAN17G1329 Fragaria x ananassa HOM05D002863 ORTHO05D005691 8.5e-24 114.4 157 42.0
EL10Ac4g09337 Beta vulgaris HOM05D002863 ORTHO05D005691 1.1e-23 114.0 154 41.6
Gohir.A09G217400 Gossypium hirsutum HOM05D002863 ORTHO05D005691 1.1e-23 114.0 154 41.6
CDE07G0808 Ceratophyllum demersum HOM05D002863 ORTHO05D005691 1.5e-23 113.6 158 37.3
AT1G05460 Arabidopsis thaliana HOM05D002863 ORTHO05D005691 1.9e-23 113.2 156 41.7
AUR62000846 Chenopodium quinoa HOM05D002863 ORTHO05D005691 1.9e-23 113.2 154 40.9
CARHR004950 Cardamine hirsuta HOM05D002863 ORTHO05D005691 2.5e-23 112.8 156 40.4
A10p04180 Brassica napus HOM05D002863 ORTHO05D005691 5.5e-23 111.7 156 41.7
BraA10t42687Z Brassica rapa HOM05D002863 ORTHO05D005691 5.5e-23 111.7 156 41.7
Carub.0001s0479 Capsella rubella HOM05D002863 ORTHO05D005691 5.5e-23 111.7 156 39.7
LjContig00222g0014636 Lotus japonicus HOM05D002863 ORTHO05D005691 5.5e-23 111.7 147 41.5
Os03g0160400 Oryza sativa ssp. japonica HOM05D002863 ORTHO05D005691 9.4e-23 110.9 168 38.7
Phvul.002G042600 Phaseolus vulgaris HOM05D002863 ORTHO05D005691 9.4e-23 110.9 154 40.3
VMungo0251G0587 Vigna mungo HOM05D002863 ORTHO05D005691 9.4e-23 110.9 159 39.6
Glyma.01G235200 Glycine max HOM05D002863 ORTHO05D005691 1.2e-22 110.5 150 41.3
Potri.008G155400 Populus trichocarpa HOM05D002863 ORTHO05D005691 1.6e-22 110.2 154 41.6
TPR.G38022 Trifolium pratense HOM05D002863 ORTHO05D005691 2.1e-22 109.8 150 42.7
Ca_24420_v3 Cicer arietinum L. HOM05D002863 ORTHO05D005691 2.7e-22 109.4 150 41.3
HPP92_006123 Vanilla planifolia HOM05D002863 ORTHO05D005691 2.7e-22 109.4 154 38.3
Medtr2g049990 Medicago truncatula HOM05D002863 ORTHO05D005691 3.6e-22 109.0 150 42.0
Medtr5g006890 Medicago truncatula HOM05D002863 ORTHO05D005691 4.7e-22 108.6 150 42.0
VMungo1215G2311 Vigna mungo HOM05D002863 ORTHO05D005691 6.1e-22 108.2 159 39.0
Hund10646 Selenicereus undatus HOM05D002863 ORTHO05D005691 6.8e-21 104.8 154 39.0
A08p08300 Brassica napus HOM05D002863 ORTHO05D005691 1.5e-20 103.6 150 41.3
PGR004G1808 Punica granatum HOM05D002863 ORTHO05D005691 1.5e-20 103.6 159 35.8
QL06p001686 Quercus lobata HOM05D002863 ORTHO05D005691 1.5e-20 103.6 154 39.6
Zm00001eb004540 Zea mays HOM05D002863 ORTHO05D005691 1.3e-19 100.5 147 37.4
Zm00001eb403310 Zea mays HOM05D002863 ORTHO05D005691 2.2e-19 99.8 147 37.4
Sed0008697 Sechium edule HOM05D002863 ORTHO05D005691 2.0e-17 93.2 152 37.5
HanXRQChr04g0115171 Helianthus annuus HOM05D002863 ORTHO05D005691 7.7e-17 91.3 49 83.7
HanXRQChr02g0033141 Helianthus annuus HOM05D002863 ORTHO05D005691 2.3e-16 89.7 70 54.3
TAR260G0006 Trochodendron aralioides HOM05D002863 ORTHO05D005691 1.3e-11 73.9 70 48.6
unitig_899.g14831 Utricularia gibba HOM05D002863 ORTHO05D005691 2.0e-09 66.6 91 45.1
Ciclev10000353m.g Citrus clementina HOM05D002863 ORTHO05D005691 7.8e-09 64.7 70 44.3
VMungo0251G2242 Vigna mungo HOM05D002863 ORTHO05D005691 1.3e-08 63.9 100 38.0


User provided reference genes

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