Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0052601 Helianthus annuus HOM05D002824 ORTHO05D008771 1.1e-30 136.0 66 100.0
HanXRQChr00c0394g0574551 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr00c0593g0576361 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr00c0925g0577891 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr01g0020221 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr04g0127491 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr05g0152571 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr10g0284381 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr10g0318061 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr11g0321091 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr11g0326961 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr12g0369851 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQChr15g0486561 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
HanXRQCPg0580181 Helianthus annuus HOM05D002824 ORTHO05D008771 3.2e-27 124.4 59 100.0
DCAR_032520 Daucus carota HOM05D002824 ORTHO05D008771 9.4e-27 122.9 59 96.6
PSO548G0003 Papaver somniferum HOM05D002824 ORTHO05D008771 3.6e-26 120.9 59 94.9
Hma1.2p1_0818F.1_g223320 Hydrangea macrophylla HOM05D002824 ORTHO05D008771 1.0e-25 119.4 57 98.2
Sc25g0002050 Simmondsia chinensis HOM05D000964 ORTHO05D001488 1.4e-25 119.0 59 94.9
Lsat_1_v5_gn_0_41600 Lactuca sativa HOM05D000964 ORTHO05D004047 5.2e-25 117.1 57 98.2
Lsat_1_v5_gn_2_92080 Lactuca sativa HOM05D000964 ORTHO05D004047 5.2e-25 117.1 57 98.2
Lsat_1_v5_gn_3_81720 Lactuca sativa HOM05D000964 ORTHO05D003870 5.2e-25 117.1 57 98.2
Lsat_1_v5_gn_6_69061 Lactuca sativa HOM05D000964 ORTHO05D004047 5.2e-25 117.1 57 98.2
Lsat_1_v5_gn_8_146180 Lactuca sativa HOM05D000964 ORTHO05D003870 5.2e-25 117.1 57 98.2
Ah.10g027210 Amaranthus hybridus HOM05D000964 ORTHO05D001488 1.2e-24 115.9 59 93.2
Ah.10g027340 Amaranthus hybridus HOM05D000964 ORTHO05D001488 1.2e-24 115.9 59 93.2
Ah.10g027460 Amaranthus hybridus HOM05D000964 ORTHO05D001488 1.2e-24 115.9 59 93.2
EL10Ac5g11668 Beta vulgaris HOM05D002824 ORTHO05D008771 1.2e-24 115.9 59 93.2
Lj3g0012155 Lotus japonicus HOM05D002824 ORTHO05D008771 1.2e-24 115.9 57 89.5
Lalb_Chr01g0006541 Lupinus albus HOM05D002824 ORTHO05D008771 2.0e-24 115.2 57 89.5
arahy.Tifrunner.gnm1.ann1.RFE8PP Arachis hypogaea HOM05D002824 ORTHO05D008771 2.6e-24 114.8 57 87.7
TPR.G40092 Trifolium pratense HOM05D002824 ORTHO05D008771 3.4e-24 114.4 57 86.0
Ah.10g028980 Amaranthus hybridus HOM05D000964 ORTHO05D001488 9.8e-24 112.8 59 91.5
PGR042G2139 Punica granatum HOM05D002824 ORTHO05D008771 9.8e-24 112.8 59 84.7
Eucgr.G00343 Eucalyptus grandis HOM05D002824 ORTHO05D008771 1.3e-23 112.5 59 83.1
Lsat_1_v5_gn_5_50421 Lactuca sativa HOM05D000964 ORTHO05D003870 1.7e-23 112.1 57 94.7
Medtr8g061130 Medicago truncatula HOM05D002824 ORTHO05D008771 1.7e-23 112.1 57 82.5
Phvul.003G183400 Phaseolus vulgaris HOM05D002824 ORTHO05D008771 1.7e-23 112.1 57 84.2
VMungo1215G1991 Vigna mungo HOM05D002824 ORTHO05D008771 1.7e-23 112.1 57 84.2
Glyma.17G080200 Glycine max HOM05D002824 ORTHO05D008771 3.7e-23 110.9 57 82.5
Psat4g172920 Pisum sativum HOM05D002824 ORTHO05D008771 4.8e-23 110.5 57 82.5
Manes.07G025200 Manihot esculenta HOM05D002824 ORTHO05D008771 6.3e-23 110.2 57 82.5
Manes.10G116800 Manihot esculenta HOM05D002824 ORTHO05D008771 6.3e-23 110.2 57 82.5
Oeu054718.1 Olea europaea HOM05D002824 ORTHO05D008771 8.3e-23 109.8 59 89.8
Ciclev10022760m.g Citrus clementina HOM05D002824 ORTHO05D008771 1.1e-22 109.4 56 82.1
Potri.018G038900 Populus trichocarpa HOM05D002824 ORTHO05D008771 1.4e-22 109.0 57 80.7
QL08p021656 Quercus lobata HOM05D002824 ORTHO05D008771 2.4e-22 108.2 58 81.0
Aqoxy7G01548 Aquilegia oxysepala HOM05D002824 ORTHO05D008771 3.1e-22 107.8 59 81.4
ClCG11G018100 Citrullus lanatus HOM05D002824 ORTHO05D008771 3.1e-22 107.8 57 80.7
Nitab4.5_0000676g0190 Nicotiana tabacum HOM05D002824 ORTHO05D008771 3.1e-22 107.8 58 81.0
Nitab4.5_0005206g0060 Nicotiana tabacum HOM05D002824 ORTHO05D008771 3.1e-22 107.8 58 81.0
Peaxi162Scf00652g00418 Petunia axillaris HOM05D002824 ORTHO05D008771 3.1e-22 107.8 58 81.0
Solyc12g098350.1 Solanum lycopersicum HOM05D002824 ORTHO05D008771 3.1e-22 107.8 58 81.0
Sopen12g033130 Solanum pennellii HOM05D002824 ORTHO05D008771 3.1e-22 107.8 58 81.0
PGSC0003DMG400007705 Solanum tuberosum HOM05D002824 ORTHO05D008771 3.1e-22 107.8 58 81.0
CAN.G767.42 Capsicum annuum HOM05D002824 ORTHO05D008771 7.0e-22 106.7 58 79.3
Sc16g0004450 Simmondsia chinensis HOM05D002824 ORTHO05D008771 7.0e-22 106.7 59 86.4
Glyma.05G019600 Glycine max HOM05D002824 ORTHO05D008771 9.1e-22 106.3 57 78.9
Potri.006G241100 Populus trichocarpa HOM05D002824 ORTHO05D008771 9.1e-22 106.3 57 78.9
CiPaw.11G169000 Carya illinoinensis HOM05D002824 ORTHO05D008771 2.7e-21 104.8 58 77.6
Atru.chr9.2077 Acer truncatum HOM05D002824 ORTHO05D008771 3.5e-21 104.4 55 78.2
Atru.chr1.2540 Acer truncatum HOM05D002824 ORTHO05D008771 4.5e-21 104.0 55 76.4
MELO3C016702.2 Cucumis melo HOM05D002824 ORTHO05D008771 1.0e-20 102.8 57 78.9
FAN11G2965 Fragaria x ananassa HOM05D002824 ORTHO05D008771 1.0e-20 102.8 59 78.0
FAN21G0827 Fragaria x ananassa HOM05D002824 ORTHO05D008771 1.0e-20 102.8 59 78.0
Prupe.4G182300 Prunus persica HOM05D002824 ORTHO05D008771 1.0e-20 102.8 59 76.3
Sabra06G0188500 Salix brachista HOM05D002824 ORTHO05D008771 1.0e-20 102.8 57 75.4
Sed0016999 Sechium edule HOM05D002824 ORTHO05D008771 1.0e-20 102.8 59 76.3
CsaV3_4G033730 Cucumis sativus L. HOM05D002824 ORTHO05D008771 2.3e-20 101.7 57 77.2
COL.COLO4_21755 Corchorus olitorius HOM05D002824 ORTHO05D008771 1.5e-19 99.0 57 71.9
Duzib205G1549 Durio zibethinus HOM05D002824 ORTHO05D008771 1.5e-19 99.0 57 71.9
Lsat_1_v5_gn_2_136980 Lactuca sativa HOM05D002824 ORTHO05D008771 1.5e-19 99.0 57 78.9
Thecc.03G290100 Theobroma cacao HOM05D002824 ORTHO05D008771 1.5e-19 99.0 57 71.9
Gohir.A12G232300 Gossypium hirsutum HOM05D002824 ORTHO05D008771 1.9e-19 98.6 57 71.9
Gohir.D12G235100 Gossypium hirsutum HOM05D002824 ORTHO05D008771 1.9e-19 98.6 57 71.9
Gorai.008G251300 Gossypium raimondii HOM05D002824 ORTHO05D008771 1.9e-19 98.6 57 71.9
MD11G1244000 Malus domestica HOM05D002824 ORTHO05D008771 3.3e-19 97.8 57 77.2
Duzib084G0020 Durio zibethinus HOM05D002824 ORTHO05D008771 1.2e-18 95.9 57 70.2
Sc20g0004270 Simmondsia chinensis HOM05D000964 ORTHO05D001488 1.2e-18 95.9 59 78.0
Cpa.g.sc321.5 Carica papaya HOM05D002824 ORTHO05D008771 1.6e-18 95.5 56 78.6
FvH4_3g20270 Fragaria vesca HOM05D002824 ORTHO05D008771 2.8e-18 94.7 55 76.4
FAN16G1250 Fragaria x ananassa HOM05D002824 ORTHO05D008771 2.8e-18 94.7 55 76.4
FAN25G0310 Fragaria x ananassa HOM05D002824 ORTHO05D008771 2.8e-18 94.7 55 76.4
RcHm_v2.0_Chr5g0034161 Rosa chinensis HOM05D002824 ORTHO05D008771 2.8e-18 94.7 55 76.4
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.4e-17 92.4 66 69.7
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 8.9e-17 89.7 59 72.9
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.9e-17 89.7 59 72.9
Aa31LG9G11000 Aethionema arabicum HOM05D002824 ORTHO05D008771 2.6e-16 88.2 56 71.4
Medtr0002s0770 Medicago truncatula HOM05D002824 ORTHO05D008771 2.6e-16 88.2 51 80.4
Prupe.4G182400 Prunus persica HOM05D002824 ORTHO05D008771 3.4e-16 87.8 59 66.1
Hund26844 Selenicereus undatus HOM05D000964 ORTHO05D001488 3.4e-16 87.8 58 72.4
AL6G45360 Arabidopsis lyrata HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
AT4G11175 Arabidopsis thaliana HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
BcaB01g01596 Brassica carinata HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
BcaB05g23855 Brassica carinata HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
A09p28030 Brassica napus HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
BraA09t38371Z Brassica rapa HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
Carub.0006s3001 Capsella rubella HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
CARHR255400 Cardamine hirsuta HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
Thhalv10029051m.g Eutrema salsugineum HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
Sp6g06240 Schrenkiella parvula HOM05D002824 ORTHO05D008771 7.5e-16 86.7 55 70.9
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 7.5e-16 86.7 58 70.7
BcaC04g21113 Brassica carinata HOM05D002824 ORTHO05D008771 9.8e-16 86.3 55 69.1
C09p35540 Brassica napus HOM05D002824 ORTHO05D008771 9.8e-16 86.3 55 69.1
BolC9t56393H Brassica oleracea HOM05D002824 ORTHO05D008771 9.8e-16 86.3 55 69.1
THA.LOC104814832 Tarenaya hassleriana HOM05D002824 ORTHO05D008771 2.8e-15 84.7 56 71.4
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.7e-15 84.3 55 72.7
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 1.6e-13 79.0 53 75.5
SMO358G0035 Selaginella moellendorffii HOM05D002824 ORTHO05D008771 2.7e-13 78.2 51 70.6
PSO782G5188 Papaver somniferum HOM05D002824 ORTHO05D008771 7.8e-13 76.6 57 66.7
Ca_24278_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 2.3e-12 75.1 40 77.5
MBI15_g40528_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D008771 1.9e-11 72.0 38 84.2
ClCG00G003150 Citrullus lanatus HOM05D002824 ORTHO05D008771 3.3e-11 71.2 47 78.7
Sc20g0003000 Simmondsia chinensis HOM05D002824 ORTHO05D008771 9.5e-11 69.7 37 89.2
MELO3C027648.2 Cucumis melo HOM05D002824 ORTHO05D008771 1.2e-10 69.3 47 76.6
Cc09_g05310 Coffea canephora HOM05D002824 ORTHO05D008771 4.7e-10 67.4 59 59.3
FAN10G1907 Fragaria x ananassa HOM05D002824 ORTHO05D005776 4.7e-10 67.4 59 59.3
FAN22G0293 Fragaria x ananassa HOM05D002824 ORTHO05D008771 4.0e-09 64.3 59 57.6
ClCG11G017170 Citrullus lanatus HOM05D002824 ORTHO05D008771 5.2e-09 63.9 39 82.1
Ca_29478_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 2.6e-08 61.6 58 43.1
RcHm_v2.0_CPg0501881 Rosa chinensis HOM05D002824 ORTHO05D008771 2.6e-08 61.6 40 70.0
vmacro22400 Vaccinium macrocarpon HOM05D000964 ORTHO05D001488 3.7e-07 57.8 47 61.7
vmacro22425 Vaccinium macrocarpon HOM05D000964 ORTHO05D001488 3.7e-07 57.8 47 61.7
MELO3C032365.2 Cucumis melo HOM05D002824 ORTHO05D008771 4.9e-07 57.4 47 63.8
EL10Ac5g11781 Beta vulgaris HOM05D002824 ORTHO05D008771 2.4e-06 55.1 35 77.1
MELO3C033566.2 Cucumis melo HOM05D002824 ORTHO05D008771 3.2e-06 54.7 47 61.7
PRCOL_00002279 Prasinoderma coloniale HOM05D002824 ORTHO05D008771 5.4e-06 53.9 50 42.0
Cre04.g218700 Chlamydomonas reinhardtii HOM05D002824 ORTHO05D008771 9.2e-06 53.1 50 42.0


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