Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0035091 Helianthus annuus HOM05D001734 ORTHO05D003483 1.1e-43 179.5 87 100.0
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 6.6e-12 73.9 56 66.1
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 8.7e-12 73.6 51 72.5
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.9e-11 72.4 68 55.9
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 5.6e-11 70.9 68 54.4
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.3e-10 69.7 59 61.0
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.6e-10 69.3 51 66.7
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.8e-10 68.6 51 70.6
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 3.6e-10 68.2 51 64.7
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 4.8e-10 67.8 63 58.7
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 6.2e-10 67.4 70 54.3
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 6.2e-10 67.4 67 52.2
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 6.2e-10 67.4 50 66.0
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 8.1e-10 67.0 53 56.6
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 8.1e-10 67.0 51 66.7
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.1e-09 66.6 51 62.7
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.1e-09 66.6 51 64.7
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.4e-09 66.2 51 62.7
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.8e-09 65.9 68 52.9
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 1.8e-09 65.9 70 51.4
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 2.4e-09 65.5 67 55.2
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.4e-09 65.5 68 51.5
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 2.4e-09 65.5 67 52.2
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 3.1e-09 65.1 63 54.0
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 3.1e-09 65.1 84 42.9
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 3.1e-09 65.1 67 47.8
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 5.3e-09 64.3 76 43.4
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 5.3e-09 64.3 76 43.4
CSS0038273 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 5.3e-09 64.3 68 50.0
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 5.3e-09 64.3 68 51.5
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 5.3e-09 64.3 68 51.5
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 5.3e-09 64.3 67 47.8
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 9.0e-09 63.5 63 54.0
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 9.0e-09 63.5 67 47.8
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 9.0e-09 63.5 67 52.2
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.2e-08 63.2 67 49.3
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.2e-08 63.2 67 52.2
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.2e-08 63.2 82 42.7
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.2e-08 63.2 67 49.3
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.2e-08 63.2 67 49.3
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.5e-08 62.8 67 46.3
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.5e-08 62.8 84 44.0
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.5e-08 62.8 51 60.8
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.5e-08 62.8 85 42.4
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 1.5e-08 62.8 51 62.7
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 1.5e-08 62.8 53 52.8
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 2.0e-08 62.4 68 50.0
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 2.0e-08 62.4 51 62.7
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 2.0e-08 62.4 74 44.6
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 2.6e-08 62.0 50 64.0
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 3.4e-08 61.6 67 44.8
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 3.4e-08 61.6 70 47.1
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 3.4e-08 61.6 85 42.4
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 4.4e-08 61.2 67 44.8
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 4.4e-08 61.2 67 44.8
Lsat_1_v5_gn_9_85140 Lactuca sativa HOM05D001734 ORTHO05D003483 4.4e-08 61.2 51 58.8
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 5.8e-08 60.8 74 44.6
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 5.8e-08 60.8 74 44.6
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 5.8e-08 60.8 66 50.0
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 7.6e-08 60.5 67 46.3
CARHR156930 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.6e-08 60.5 67 46.3
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.3e-07 59.7 86 43.0
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.3e-07 59.7 51 58.8
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.7e-07 59.3 51 58.8
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.7e-07 59.3 68 47.1
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.7e-07 59.3 68 48.5
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.7e-07 59.3 51 58.8
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.7e-07 59.3 51 54.9
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.7e-07 59.3 51 58.8
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 2.2e-07 58.9 67 43.3
Medtr3g110870 Medicago truncatula HOM05D001734 ORTHO05D003483 2.9e-07 58.5 51 54.9
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 2.9e-07 58.5 67 46.3
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 3.8e-07 58.2 51 56.9
SEGI_11837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 3.8e-07 58.2 51 54.9
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 6.4e-07 57.4 69 47.8
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 6.4e-07 57.4 66 48.5
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.4e-07 57.0 51 56.9
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.1e-06 56.6 67 44.8
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.1e-06 56.6 67 44.8
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.1e-06 56.6 51 56.9
unitig_0.g1442 Utricularia gibba HOM05D001734 ORTHO05D003483 1.1e-06 56.6 51 54.9
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.1e-06 56.6 71 45.1
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.4e-06 56.2 51 58.8
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 1.4e-06 56.2 63 46.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.9e-06 55.8 86 39.5
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.9e-06 55.8 51 54.9
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.9e-06 55.8 51 52.9
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.4e-06 55.5 67 46.3
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 3.2e-06 55.1 54 50.0
SHI16990 Sapria himalayana HOM05D001734 ORTHO05D003483 3.2e-06 55.1 70 48.6
VMungo1309G0494 Vigna mungo HOM05D001734 ORTHO05D003483 5.4e-06 54.3 51 52.9


User provided reference genes

Program Settings