Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0024801 Helianthus annuus HOM05D004869 ORTHO05D005893 9.6e-83 310.1 152 100.0
HanXRQChr17g0535991 Helianthus annuus HOM05D004869 ORTHO05D005893 1.6e-45 186.4 176 58.0
ECA246G3101 Erigeron canadensis HOM05D004869 ORTHO05D005893 2.0e-43 179.5 177 54.8
Lsat_1_v5_gn_3_21560 Lactuca sativa HOM05D004869 ORTHO05D005893 2.4e-41 172.6 185 52.4
Peaxi162Scf00065g01213 Petunia axillaris HOM05D004869 ORTHO05D005893 8.2e-34 147.5 179 44.1
Hma1.2p1_1352F.1_g277460 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 3.1e-33 145.6 173 44.5
Nitab4.5_0008670g0020 Nicotiana tabacum HOM05D004869 ORTHO05D005893 5.3e-33 144.8 176 45.5
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 1.6e-32 143.3 175 45.7
Nitab4.5_0000695g0140 Nicotiana tabacum HOM05D004869 ORTHO05D005893 2.7e-32 142.5 176 44.9
MD16G1164100 Malus domestica HOM05D004869 ORTHO05D005893 4.5e-32 141.7 178 42.1
Solyc01g066310.4 Solanum lycopersicum HOM05D004869 ORTHO05D005893 4.5e-32 141.7 176 43.8
Sopen01g027900 Solanum pennellii HOM05D004869 ORTHO05D005893 4.5e-32 141.7 176 43.8
Hma1.2p1_0804F.1_g221110 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 5.9e-32 141.4 173 43.4
Prupe.1G131800 Prunus persica HOM05D004869 ORTHO05D005893 7.7e-32 141.0 175 43.4
Ca_01910_v3 Cicer arietinum L. HOM05D004869 ORTHO05D005893 1.0e-31 140.6 178 43.3
Eucgr.B01578 Eucalyptus grandis HOM05D004869 ORTHO05D005893 1.0e-31 140.6 180 41.1
Oeu016255.1 Olea europaea HOM05D004869 ORTHO05D005893 1.0e-31 140.6 183 42.1
CANSAT78G0178 Cannabis sativa HOM05D004869 ORTHO05D005893 1.3e-31 140.2 184 40.8
CAN.G449.73 Capsicum annuum HOM05D004869 ORTHO05D005893 1.7e-31 139.8 174 44.3
MD13G1164300 Malus domestica HOM05D004869 ORTHO05D005893 1.7e-31 139.8 178 42.1
CiPaw.01G145300 Carya illinoinensis HOM05D004869 ORTHO05D005893 2.2e-31 139.4 180 44.4
Sc19g0005490 Simmondsia chinensis HOM05D004869 ORTHO05D005893 2.9e-31 139.0 180 41.1
Actinidia40299 Actinidia chinensis HOM05D004869 ORTHO05D005893 3.8e-31 138.7 176 42.6
Solyc05g054370.2 Solanum lycopersicum HOM05D004869 ORTHO05D005893 5.0e-31 138.3 174 43.7
Sopen05g032860 Solanum pennellii HOM05D004869 ORTHO05D005893 5.0e-31 138.3 174 43.7
PGSC0003DMG400023436 Solanum tuberosum HOM05D004869 ORTHO05D005893 5.0e-31 138.3 174 43.7
Cfa015427 Carpinus fangiana HOM05D004869 ORTHO05D005893 6.5e-31 137.9 179 42.5
Atru.chr4.2905 Acer truncatum HOM05D004869 ORTHO05D005893 8.5e-31 137.5 177 42.9
ClCG05G006260 Citrullus lanatus HOM05D004869 ORTHO05D005893 8.5e-31 137.5 179 39.7
Medtr2g435800 Medicago truncatula HOM05D004869 ORTHO05D005893 8.5e-31 137.5 178 42.1
RcHm_v2.0_Chr4g0423401 Rosa chinensis HOM05D004869 ORTHO05D005893 8.5e-31 137.5 180 41.1
Cc03_g01500 Coffea canephora HOM05D004869 ORTHO05D005893 1.1e-30 137.1 175 44.0
Migut.N00074 Erythranthe guttata HOM05D004869 ORTHO05D005893 1.1e-30 137.1 174 42.0
Hund20507 Selenicereus undatus HOM05D004869 ORTHO05D005893 1.1e-30 137.1 180 41.7
Rhsim04G0226400 Rhododendron simsii HOM05D004869 ORTHO05D005893 1.9e-30 136.3 181 42.0
Psat1g156400 Pisum sativum HOM05D004869 ORTHO05D005893 2.5e-30 136.0 178 41.6
TWI73G0801 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 5.5e-30 134.8 176 41.5
arahy.Tifrunner.gnm1.ann1.ZXWI6N Arachis hypogaea HOM05D004869 ORTHO05D005893 7.2e-30 134.4 177 40.7
TPR.G26039 Trifolium pratense HOM05D004869 ORTHO05D005893 7.2e-30 134.4 178 41.0
Lalb_Chr15g0086081 Lupinus albus HOM05D004869 ORTHO05D005893 9.4e-30 134.0 178 39.3
Phvul.009G250700 Phaseolus vulgaris HOM05D004869 ORTHO05D005893 1.2e-29 133.7 178 41.0
vmacro08186 Vaccinium macrocarpon HOM05D004869 ORTHO05D005893 1.2e-29 133.7 176 43.2
Cpa.g.sc50.161 Carica papaya HOM05D004869 ORTHO05D005893 2.1e-29 132.9 180 40.6
FvH4_4g18700 Fragaria vesca HOM05D004869 ORTHO05D005893 2.1e-29 132.9 180 40.6
Sed0001345 Sechium edule HOM05D004869 ORTHO05D005893 3.6e-29 132.1 179 39.1
TWI53G1493 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 3.6e-29 132.1 174 40.2
MELO3C006684.2 Cucumis melo HOM05D004869 ORTHO05D005893 6.1e-29 131.3 179 38.0
Manes.03G198800 Manihot esculenta HOM05D004869 ORTHO05D005893 6.1e-29 131.3 174 40.8
AT3G06810 Arabidopsis thaliana HOM05D004869 ORTHO05D005893 8.0e-29 131.0 180 38.9
SGA_v2.0_scaffold119G32706 Striga asiatica HOM05D004869 ORTHO05D005893 1.0e-28 130.6 174 40.2
GSVIVG01035107001 Vitis vinifera HOM05D004869 ORTHO05D005893 1.0e-28 130.6 178 39.9
AL3G17930 Arabidopsis lyrata HOM05D004869 ORTHO05D005893 1.4e-28 130.2 180 38.3
CsaV3_3G014880 Cucumis sativus L. HOM05D004869 ORTHO05D005893 1.4e-28 130.2 179 38.0
Thhalv10020074m.g Eutrema salsugineum HOM05D004869 ORTHO05D005893 1.4e-28 130.2 187 37.4
EL10Ac3g06663 Beta vulgaris HOM05D004869 ORTHO05D005893 1.8e-28 129.8 180 39.4
CARHR081430 Cardamine hirsuta HOM05D004869 ORTHO05D005893 1.8e-28 129.8 187 38.0
Lalb_Chr20g0117401 Lupinus albus HOM05D004869 ORTHO05D005893 1.8e-28 129.8 181 38.7
Thecc.04G289100 Theobroma cacao HOM05D004869 ORTHO05D005893 1.8e-28 129.8 180 38.3
COL.COLO4_13820 Corchorus olitorius HOM05D004869 ORTHO05D005893 2.3e-28 129.4 178 38.8
FAN12G0537 Fragaria x ananassa HOM05D004869 ORTHO05D005893 2.3e-28 129.4 189 38.6
VMungo1309G2596 Vigna mungo HOM05D004869 ORTHO05D005893 2.3e-28 129.4 178 40.4
Carub.0003s0635 Capsella rubella HOM05D004869 ORTHO05D005893 3.0e-28 129.0 180 37.8
Lj6g0019427 Lotus japonicus HOM05D004869 ORTHO05D005893 3.0e-28 129.0 178 39.9
AUR62015247 Chenopodium quinoa HOM05D004869 ORTHO05D005893 4.0e-28 128.6 180 39.4
Aqoxy5G00789 Aquilegia oxysepala HOM05D004869 ORTHO05D005893 5.2e-28 128.3 178 41.0
BraA05t22852Z Brassica rapa HOM05D004869 ORTHO05D005893 8.8e-28 127.5 178 38.2
Glyma.15G150900 Glycine max HOM05D004869 ORTHO05D005893 8.8e-28 127.5 178 39.3
QL06p010392 Quercus lobata HOM05D004869 ORTHO05D005893 8.8e-28 127.5 176 40.3
Lj6A681T39 Lonicera japonica HOM05D004869 ORTHO05D005893 1.2e-27 127.1 174 42.0
TAR365G0733 Trochodendron aralioides HOM05D004869 ORTHO05D005893 1.2e-27 127.1 178 39.9
A05p41290 Brassica napus HOM05D004869 ORTHO05D005893 2.0e-27 126.3 178 37.6
C05p60510 Brassica napus HOM05D004869 ORTHO05D005893 2.0e-27 126.3 178 37.6
BolC5t34705H Brassica oleracea HOM05D004869 ORTHO05D005893 2.0e-27 126.3 178 37.6
Glyma.09G042000 Glycine max HOM05D004869 ORTHO05D005893 2.0e-27 126.3 178 38.8
AUR62018045 Chenopodium quinoa HOM05D004869 ORTHO05D005893 2.6e-27 125.9 180 38.9
Gohir.D02G055900 Gossypium hirsutum HOM05D004869 ORTHO05D005893 3.4e-27 125.6 180 37.2
Gorai.005G061800 Gossypium raimondii HOM05D004869 ORTHO05D005893 3.4e-27 125.6 180 37.2
Gohir.A02G051000 Gossypium hirsutum HOM05D004869 ORTHO05D005893 4.4e-27 125.2 191 36.1
Nn3g21544 Nelumbo nucifera HOM05D004869 ORTHO05D005893 4.4e-27 125.2 180 39.4
FAN17G0377 Fragaria x ananassa HOM05D004869 ORTHO05D005893 7.5e-27 124.4 197 36.5
Potri.010G010448 Populus trichocarpa HOM05D004869 ORTHO05D005893 1.7e-26 123.2 174 38.5
Ciclev10004291m.g Citrus clementina HOM05D004869 ORTHO05D005893 2.8e-26 122.5 179 37.4
Ciclev10004342m.g Citrus clementina HOM05D004869 ORTHO05D005893 2.8e-26 122.5 179 37.4
Aa31LG5G17400 Aethionema arabicum HOM05D004869 ORTHO05D005893 3.7e-26 122.1 187 35.8
THA.LOC104802695 Tarenaya hassleriana HOM05D004869 ORTHO05D005893 3.7e-26 122.1 178 37.6
Sp3g05780 Schrenkiella parvula HOM05D004869 ORTHO05D005893 8.3e-26 120.9 186 34.9
Duzib212G0051 Durio zibethinus HOM05D004869 ORTHO05D005893 1.1e-25 120.6 180 36.7
ATR0693G241 Amborella trichopoda HOM05D004869 ORTHO05D005893 1.4e-25 120.2 173 39.9
BcaC05g30559 Brassica carinata HOM05D004869 ORTHO05D005893 1.8e-25 119.8 181 36.5
DCAR_027053 Daucus carota HOM05D004869 ORTHO05D005893 1.8e-25 119.8 175 40.0
Potri.008G219000 Populus trichocarpa HOM05D004869 ORTHO05D005893 1.8e-25 119.8 174 35.1
MBI18_g44774_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 7.0e-25 117.9 179 37.4
CDE11G0521 Ceratophyllum demersum HOM05D004869 ORTHO05D005893 1.2e-24 117.1 177 36.7
Sabra10G0006600 Salix brachista HOM05D004869 ORTHO05D005893 4.5e-24 115.2 174 36.2
Os07g0675000 Oryza sativa ssp. japonica HOM05D004869 ORTHO05D005893 5.9e-24 114.8 181 37.6
Zm00001eb111400 Zea mays HOM05D004869 ORTHO05D005893 1.0e-23 114.0 181 37.6
PSO210G1050 Papaver somniferum HOM05D004869 ORTHO05D005893 1.3e-23 113.6 178 37.1
FAN12G1313 Fragaria x ananassa HOM05D004869 ORTHO05D005893 1.7e-23 113.2 219 32.9
PSO832G2232 Papaver somniferum HOM05D004869 ORTHO05D005893 2.9e-23 112.5 178 37.1
SMO169G0300 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 1.5e-22 110.2 148 37.8
HPP92_003120 Vanilla planifolia HOM05D004869 ORTHO05D005893 7.2e-22 107.8 179 34.6
arahy.Tifrunner.gnm1.ann1.YH0B1H Arachis hypogaea HOM05D004869 ORTHO05D005893 3.4e-19 99.0 144 41.0
Haze_01165 Corylus avellana HOM05D004869 ORTHO05D005893 9.8e-19 97.4 65 69.2
SHI00220 Sapria himalayana HOM05D004869 ORTHO05D005893 9.8e-19 97.4 174 33.3
SMO202G0033 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 5.4e-17 91.7 180 30.6
Pp3c18_21710 Physcomitrium patens HOM05D004869 ORTHO05D005893 1.6e-16 90.1 163 33.7
Pp3c22_4180 Physcomitrium patens HOM05D004869 ORTHO05D005893 2.0e-16 89.7 173 32.4
AagrBONN_evm.TU.Sc2ySwM_228.2629 Anthoceros agrestis HOM05D004869 ORTHO05D005893 2.3e-15 86.3 181 30.4
HanXRQChr05g0142701 Helianthus annuus HOM05D002928 ORTHO05D225140 1.0e-12 77.4 39 97.4
Oeu031983.1 Olea europaea HOM05D004869 ORTHO05D005893 1.0e-12 77.4 56 62.5
Ah.04g153720 Amaranthus hybridus HOM05D004869 ORTHO05D005893 2.3e-12 76.3 56 57.1
SEGI_25692 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 4.0e-12 75.5 66 50.0
CSS0035117 Camellia sinensis var. sinensis HOM05D004869 ORTHO05D005893 1.5e-11 73.6 52 67.3
Mapoly0111s0015 Marchantia polymorpha HOM05D004869 ORTHO05D005893 2.6e-11 72.8 57 47.4
DCAR_023301 Daucus carota HOM05D004869 ORTHO05D005893 1.3e-10 70.5 52 53.8
unitig_26.g10564 Utricularia gibba HOM05D004869 ORTHO05D005893 1.1e-09 67.4 44 65.9
Lsat_1_v5_gn_4_34540 Lactuca sativa HOM05D004869 ORTHO05D005893 4.1e-09 65.5 100 44.0
CBR_g54445 Chara braunii HOM05D004869 ORTHO05D005893 8.6e-07 57.8 52 48.1


User provided reference genes

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