Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 7.6e-22 106.3 55 100.0
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.2e-11 72.4 45 84.4
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.2e-11 72.4 45 84.4
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.2e-11 72.4 44 86.4
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.2e-11 72.4 45 84.4
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.6e-11 72.0 45 82.2
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 2.7e-11 71.2 45 82.2
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 3.5e-11 70.9 45 82.2
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.5e-11 70.9 45 80.0
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 3.5e-11 70.9 45 80.0
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 3.5e-11 70.9 44 81.8
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 3.5e-11 70.9 45 82.2
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 3.5e-11 70.9 45 80.0
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 4.6e-11 70.5 45 82.2
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 4.6e-11 70.5 45 82.2
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 4.6e-11 70.5 45 80.0
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 6.1e-11 70.1 45 80.0
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 6.1e-11 70.1 45 82.2
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 6.1e-11 70.1 45 80.0
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 6.1e-11 70.1 45 80.0
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 6.1e-11 70.1 45 80.0
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 7.9e-11 69.7 45 77.8
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 7.9e-11 69.7 45 80.0
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 7.9e-11 69.7 45 80.0
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 7.9e-11 69.7 45 77.8
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 7.9e-11 69.7 45 77.8
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 80.0
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 80.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 80.0
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 1.0e-10 69.3 43 83.7
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 80.0
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 80.0
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 77.8
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.0e-10 69.3 45 77.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 77.8
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 77.8
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 77.8
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 80.0
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 80.0
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 80.0
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 80.0
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 80.0
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.3e-10 68.9 45 77.8
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 1.3e-10 68.9 48 72.9
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.8e-10 68.6 44 81.8
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 2.3e-10 68.2 45 77.8
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 2.3e-10 68.2 45 77.8
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 2.3e-10 68.2 45 77.8
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.3e-10 68.2 45 77.8
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 2.3e-10 68.2 45 77.8
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 3.0e-10 67.8 45 75.6
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.0e-10 67.8 45 75.6
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 3.0e-10 67.8 45 75.6
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 3.0e-10 67.8 45 75.6
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.0e-10 67.8 45 75.6
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 3.9e-10 67.4 45 75.6
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.9e-10 67.4 44 77.3
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.9e-10 67.4 45 77.8
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 3.9e-10 67.4 45 75.6
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 5.1e-10 67.0 45 75.6
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 5.1e-10 67.0 45 75.6
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 5.1e-10 67.0 45 75.6
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 5.1e-10 67.0 45 75.6
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 5.1e-10 67.0 45 73.3
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 6.7e-10 66.6 45 75.6
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 6.7e-10 66.6 45 75.6
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 8.7e-10 66.2 44 77.3
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 8.7e-10 66.2 45 75.6
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 8.7e-10 66.2 45 73.3
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.1e-09 65.9 45 73.3
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 1.1e-09 65.9 48 70.8
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.1e-09 65.9 45 75.6
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.1e-09 65.9 45 71.1
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 1.1e-09 65.9 45 73.3
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.1e-09 65.9 45 73.3
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.5e-09 65.5 45 71.1
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.5e-09 65.5 43 76.7
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 1.5e-09 65.5 45 71.1
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.5e-09 64.7 45 71.1
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.5e-09 64.7 45 71.1
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 2.5e-09 64.7 45 71.1
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 3.3e-09 64.3 45 73.3
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 4.3e-09 63.9 45 71.1
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.3e-09 63.9 45 68.9
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 4.3e-09 63.9 44 75.0
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 4.3e-09 63.9 45 71.1
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 5.7e-09 63.5 45 68.9
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 5.7e-09 63.5 45 68.9
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 5.7e-09 63.5 45 68.9
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 5.7e-09 63.5 42 76.2
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.7e-09 63.5 45 68.9
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 7.4e-09 63.2 45 71.1
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 9.7e-09 62.8 45 71.1
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 9.7e-09 62.8 43 72.1
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.3e-08 62.4 45 68.9
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.3e-08 62.4 45 68.9
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.6e-08 62.0 44 75.0
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 2.2e-08 61.6 44 68.2
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 2.2e-08 61.6 43 72.1
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.2e-08 61.6 45 66.7
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 2.2e-08 61.6 45 66.7
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 2.2e-08 61.6 45 68.9
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 2.2e-08 61.6 45 68.9
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.8e-08 61.2 49 65.3
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 1.1e-07 59.3 45 71.1
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.1e-07 59.3 45 64.4
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 1.4e-07 58.9 44 65.9
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 2.4e-07 58.2 45 66.7
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 6.9e-07 56.6 45 68.9
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-06 55.5 47 55.3
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.0e-06 55.1 49 61.2
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.0e-06 55.1 45 62.2
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.0e-06 55.1 45 62.2
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 2.6e-06 54.7 44 61.4
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 3.4e-06 54.3 77 46.8


User provided reference genes

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