Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 1.5e-259 899.0 459 100.0
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 2.1e-149 533.1 418 66.5
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 1.4e-148 530.4 418 66.0
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 1.7e-146 523.5 418 65.3
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 1.4e-145 520.4 450 60.4
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 7.0e-145 518.1 418 64.8
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 1.6e-144 516.9 417 65.2
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 2.7e-144 516.2 418 63.4
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 3.5e-144 515.8 418 63.9
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 1.0e-143 514.2 417 63.8
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 1.7e-143 513.5 418 62.4
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 6.6e-143 511.5 418 62.7
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 1.5e-142 510.4 418 63.4
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 1.5e-142 510.4 418 62.4
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 1.2e-141 507.3 418 63.6
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 1.6e-141 506.9 418 62.4
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 2.1e-141 506.5 418 64.1
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 2.8e-141 506.1 442 61.5
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 3.6e-141 505.8 418 62.9
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 4.7e-141 505.4 418 62.4
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 4.0e-140 502.3 417 62.1
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 5.2e-140 501.9 418 61.7
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 6.8e-140 501.5 418 61.0
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 8.9e-140 501.1 417 63.3
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.2e-139 500.7 418 62.0
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 1.5e-139 500.4 418 62.9
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 2.0e-139 500.0 418 62.0
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 5.7e-139 498.4 418 62.0
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 5.7e-139 498.4 418 61.7
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 7.5e-139 498.0 417 61.4
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 1.7e-138 496.9 418 62.0
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 1.7e-138 496.9 431 60.6
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 2.2e-138 496.5 418 61.0
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 2.9e-138 496.1 418 60.5
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 2.9e-138 496.1 423 61.5
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 3.7e-138 495.7 419 61.6
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 6.4e-138 495.0 428 60.7
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 8.3e-138 494.6 423 60.8
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 8.3e-138 494.6 418 61.5
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 1.4e-137 493.8 418 60.3
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 2.4e-137 493.0 418 61.0
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 4.1e-137 492.3 418 61.5
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 5.4e-137 491.9 417 62.4
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 7.0e-137 491.5 418 61.2
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 7.0e-137 491.5 418 61.2
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 9.2e-137 491.1 418 61.2
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 1.2e-136 490.7 418 60.3
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 1.2e-136 490.7 418 60.5
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 1.6e-136 490.3 418 61.2
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 1.6e-136 490.3 418 61.0
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 1.6e-136 490.3 418 61.7
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 2.0e-136 490.0 418 60.3
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.0e-136 490.0 418 61.5
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 2.0e-136 490.0 418 61.5
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 2.0e-136 490.0 418 60.5
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 4.6e-136 488.8 418 60.3
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 4.6e-136 488.8 418 61.0
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 5.9e-136 488.4 418 61.2
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 7.8e-136 488.0 417 61.6
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.0e-135 487.6 418 60.3
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 1.0e-135 487.6 418 61.2
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 1.0e-135 487.6 418 61.0
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 1.3e-135 487.3 418 60.8
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 1.3e-135 487.3 418 61.2
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 1.7e-135 486.9 418 61.0
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 3.0e-135 486.1 418 60.8
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 3.0e-135 486.1 418 61.0
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 3.0e-135 486.1 417 62.4
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 3.9e-135 485.7 418 59.8
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 3.9e-135 485.7 418 59.8
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 3.9e-135 485.7 418 59.6
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 3.9e-135 485.7 418 61.0
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 6.6e-135 485.0 376 66.5
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 8.6e-135 484.6 418 60.0
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 8.6e-135 484.6 418 60.0
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.5e-134 483.8 431 59.9
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 1.9e-134 483.4 418 60.8
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 1.9e-134 483.4 466 56.0
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 7.3e-134 481.5 418 60.5
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 1.6e-133 480.3 418 60.5
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 2.1e-133 479.9 418 59.3
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 2.1e-133 479.9 418 59.3
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 2.1e-133 479.9 418 59.3
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 3.6e-133 479.2 418 59.1
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 4.7e-133 478.8 417 60.0
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 8.0e-133 478.0 418 59.6
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 1.4e-132 477.2 415 59.8
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.8e-132 476.9 418 58.4
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 3.1e-132 476.1 418 58.6
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 4.0e-132 475.7 418 59.1
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 6.8e-132 474.9 418 60.3
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 8.9e-132 474.6 419 58.7
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 3.4e-131 472.6 419 59.4
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 7.5e-131 471.5 419 60.1
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 1.3e-130 470.7 418 58.9
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 1.3e-130 470.7 418 59.6
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 2.9e-130 469.5 418 59.3
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 8.3e-130 468.0 419 58.5
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 1.9e-129 466.8 405 59.8
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 2.4e-129 466.5 420 58.8
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 5.4e-129 465.3 417 60.7
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 7.0e-129 464.9 418 59.8
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 1.2e-128 464.2 417 60.2
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 1.3e-127 460.7 400 60.2
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 3.0e-127 459.5 400 60.0
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 8.6e-127 458.0 418 59.3
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 4.3e-126 455.7 417 59.5
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 7.3e-126 454.9 407 59.7
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 3.6e-125 452.6 499 50.7
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 1.1e-124 451.1 440 54.1
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.5e-123 447.2 452 55.8
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 4.9e-122 442.2 418 54.5
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 3.9e-119 432.6 424 54.5
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.9e-118 430.3 417 55.6
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 6.8e-116 421.8 380 59.7
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 3.8e-114 416.0 368 60.1
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 6.4e-114 415.2 419 55.8
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 1.4e-113 414.1 382 57.6
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 1.7e-111 407.1 351 59.8
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 1.9e-110 403.7 451 51.0
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 4.3e-110 402.5 351 59.3
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 2.6e-91 340.1 424 46.0
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 9.9e-91 338.2 271 62.0
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 7.1e-89 332.0 311 57.9
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 2.7e-88 330.1 423 43.7
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 1.5e-86 324.3 424 42.0
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 1.4e-81 307.8 208 73.6
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 8.7e-79 298.5 354 48.0
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 7.4e-78 295.4 281 56.2
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 8.5e-74 282.0 246 60.6
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 1.3e-69 268.1 382 44.2
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.3e-66 258.1 259 54.4
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 8.5e-66 255.4 450 36.9
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 3.0e-63 246.9 161 72.7
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 1.4e-60 238.0 420 35.5
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 6.3e-53 212.6 234 53.8
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 2.0e-46 191.0 121 76.0
CSS0034501 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.7e-42 177.9 101 82.2
CSS0009974 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 5.5e-41 172.9 103 79.6
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis HOM05D004329 ORTHO05D005516 8.0e-32 142.5 120 57.5
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 7.0e-28 129.4 413 27.1
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 8.0e-24 115.9 227 30.8
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 6.0e-19 99.8 79 58.2
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 4.3e-17 93.6 186 33.9
Lsat_1_v5_gn_5_81961 Lactuca sativa HOM05D004329 ORTHO05D005516 4.0e-15 87.0 49 83.7
Lsat_1_v5_gn_8_114301 Lactuca sativa HOM05D004329 ORTHO05D005516 2.0e-14 84.7 48 83.3
Zm00001eb202340 Zea mays HOM05D004329 ORTHO05D005516 7.5e-14 82.8 72 52.8
PRCOL_00003443 Prasinoderma coloniale HOM05D004329 ORTHO05D005516 5.4e-12 76.6 422 23.7
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 3.0e-10 70.9 69 47.8
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.9e-09 68.2 95 41.1
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 1.2e-08 65.5 59 61.0
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 5.8e-06 56.6 42 66.7


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