Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026342 Vanilla planifolia HOM05D001246 ORTHO05D427995 1.7e-38 162.2 82 100.0
HPP92_012193 Vanilla planifolia HOM05D001246 ORTHO05D002100 3.7e-12 74.7 76 60.5
MBI02_g15888_MAGBIO Magnolia biondii HOM05D001246 ORTHO05D002100 7.6e-10 67.0 88 52.3
HPP92_013991 Vanilla planifolia HOM05D001246 ORTHO05D002100 2.9e-09 65.1 77 57.1
Sabra15G0138700 Salix brachista HOM05D001246 ORTHO05D002100 1.4e-08 62.8 81 49.4
SGA_v2.0_scaffold62G21423 Striga asiatica HOM05D001246 ORTHO05D002100 4.2e-08 61.2 79 45.6
Potri.012G123900 Populus trichocarpa HOM05D001246 ORTHO05D002100 5.5e-08 60.8 79 50.6
Solyc10g078530.2 Solanum lycopersicum HOM05D001246 ORTHO05D002100 5.5e-08 60.8 78 47.4
CDE05G2019 Ceratophyllum demersum HOM05D001246 ORTHO05D002100 7.1e-08 60.5 82 51.2
Cc06_g22950 Coffea canephora HOM05D001246 ORTHO05D002100 1.6e-07 59.3 86 46.5
QL05p065271 Quercus lobata HOM05D001246 ORTHO05D002100 1.6e-07 59.3 79 48.1
PGSC0003DMG400008357 Solanum tuberosum HOM05D001246 ORTHO05D002100 1.6e-07 59.3 78 47.4
CAN.G128.63 Capsicum annuum HOM05D001246 ORTHO05D002100 2.1e-07 58.9 81 46.9
Os03g0784100 Oryza sativa ssp. japonica HOM05D001246 ORTHO05D002100 2.1e-07 58.9 87 44.8
PGR083G1565 Punica granatum HOM05D001246 ORTHO05D002100 2.1e-07 58.9 76 53.9
CAN.G694.79 Capsicum annuum HOM05D001246 ORTHO05D002100 3.5e-07 58.2 84 45.2
ClCG01G025470 Citrullus lanatus HOM05D001246 ORTHO05D002100 3.5e-07 58.2 80 47.5
Sed0012442 Sechium edule HOM05D001246 ORTHO05D002100 3.5e-07 58.2 78 50.0
Sopen10g029180 Solanum pennellii HOM05D001246 ORTHO05D002100 3.5e-07 58.2 78 46.2
Sabra12G0094100 Salix brachista HOM05D001246 ORTHO05D002100 4.6e-07 57.8 79 49.4
Lsat_1_v5_gn_8_19340 Lactuca sativa HOM05D001246 ORTHO05D002100 6.1e-07 57.4 88 43.2
TAR627G0763 Trochodendron aralioides HOM05D001246 ORTHO05D002100 6.1e-07 57.4 80 52.5
HanXRQChr15g0496651 Helianthus annuus HOM05D001246 ORTHO05D002100 7.9e-07 57.0 79 50.6
GSVIVG01037945001 Vitis vinifera HOM05D001246 ORTHO05D002100 7.9e-07 57.0 78 50.0
CsaV3_6G052720 Cucumis sativus L. HOM05D001246 ORTHO05D002100 1.0e-06 56.6 81 45.7
DCAR_006443 Daucus carota HOM05D001246 ORTHO05D002100 1.0e-06 56.6 92 41.3
Potri.015G122700 Populus trichocarpa HOM05D001246 ORTHO05D002100 1.0e-06 56.6 79 48.1
Nitab4.5_0002445g0010 Nicotiana tabacum HOM05D001246 ORTHO05D002100 1.3e-06 56.2 80 51.2
Peaxi162Scf00156g01213 Petunia axillaris HOM05D001246 ORTHO05D002100 1.3e-06 56.2 80 45.0
AT3G54950 Arabidopsis thaliana HOM05D001246 ORTHO05D002100 1.8e-06 55.8 64 50.0
MSTRG.9183 Avicennia marina HOM05D001246 ORTHO05D002100 1.8e-06 55.8 99 41.4
Cc09_g02050 Coffea canephora HOM05D001246 ORTHO05D002100 1.8e-06 55.8 79 46.8
Nitab4.5_0001029g0020 Nicotiana tabacum HOM05D001246 ORTHO05D002100 1.8e-06 55.8 95 42.1
CSS0001595 Camellia sinensis var. sinensis HOM05D001246 ORTHO05D002100 2.3e-06 55.5 89 42.7
HanXRQChr14g0456931 Helianthus annuus HOM05D001246 ORTHO05D002100 2.3e-06 55.5 82 46.3
MSTRG.27457 Avicennia marina HOM05D001246 ORTHO05D002100 3.0e-06 55.1 88 42.0
Nitab4.5_0003144g0010 Nicotiana tabacum HOM05D001246 ORTHO05D002100 3.0e-06 55.1 95 41.1
CSS0037036 Camellia sinensis var. sinensis HOM05D001246 ORTHO05D002100 3.9e-06 54.7 89 42.7
Nn2g13089 Nelumbo nucifera HOM05D001246 ORTHO05D002100 3.9e-06 54.7 90 43.3
Sed0021736 Sechium edule HOM05D001246 ORTHO05D002100 3.9e-06 54.7 87 41.4
Solyc05g056030.3 Solanum lycopersicum HOM05D001246 ORTHO05D002100 3.9e-06 54.7 96 43.8
Sopen05g034440 Solanum pennellii HOM05D001246 ORTHO05D002100 3.9e-06 54.7 96 43.8
TAR015G0001 Trochodendron aralioides HOM05D001246 ORTHO05D002100 3.9e-06 54.7 78 47.4
HPP92_015682 Vanilla planifolia HOM05D001246 ORTHO05D002100 3.9e-06 54.7 74 50.0
MSTRG.365 Avicennia marina HOM05D001246 ORTHO05D002100 5.1e-06 54.3 88 43.2
CiPaw.09G150000 Carya illinoinensis HOM05D001246 ORTHO05D002100 5.1e-06 54.3 90 43.3
CDE04G1818 Ceratophyllum demersum HOM05D001246 ORTHO05D002100 5.1e-06 54.3 82 43.9
Nitab4.5_0013024g0010 Nicotiana tabacum HOM05D001246 ORTHO05D002100 5.1e-06 54.3 78 47.4
Peaxi162Scf00249g00619 Petunia axillaris HOM05D001246 ORTHO05D002100 5.1e-06 54.3 76 48.7
TAR633G2698 Trochodendron aralioides HOM05D001246 ORTHO05D002100 5.1e-06 54.3 85 44.7
BcaC02g12044 Brassica carinata HOM05D001246 ORTHO05D002100 6.7e-06 53.9 80 42.5
A05p07140 Brassica napus HOM05D001246 ORTHO05D002100 6.7e-06 53.9 81 42.0
C04p08530 Brassica napus HOM05D001246 ORTHO05D002100 6.7e-06 53.9 80 42.5
BolC4t22450H Brassica oleracea HOM05D001246 ORTHO05D002100 6.7e-06 53.9 80 42.5
CAN.G960.50 Capsicum annuum HOM05D001246 ORTHO05D002100 6.7e-06 53.9 80 47.5
Actinidia38275 Actinidia chinensis HOM05D001246 ORTHO05D002100 8.7e-06 53.5 83 43.4
Gohir.A10G206300 Gossypium hirsutum HOM05D001246 ORTHO05D002100 8.7e-06 53.5 89 41.6
MBI10_g18715_MAGBIO Magnolia biondii HOM05D001246 ORTHO05D002100 8.7e-06 53.5 93 43.0
MD07G1175100 Malus domestica HOM05D001246 ORTHO05D002100 8.7e-06 53.5 99 43.4
Potri.008G040500 Populus trichocarpa HOM05D001246 ORTHO05D002100 8.7e-06 53.5 95 41.1
Potri.010G221700 Populus trichocarpa HOM05D001246 ORTHO05D002100 8.7e-06 53.5 95 41.1
Sabra08G0027600 Salix brachista HOM05D001246 ORTHO05D002100 8.7e-06 53.5 95 44.2
Sabra10G0171600 Salix brachista HOM05D001246 ORTHO05D002100 8.7e-06 53.5 95 41.1
TWI38G1451 Tripterygium wilfordii HOM05D001246 ORTHO05D002100 8.7e-06 53.5 88 42.0


User provided reference genes

Program Settings