Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026299 Vanilla planifolia HOM05D000724 ORTHO05D429529 9.8e-35 149.4 69 100.0
HPP92_028172 Vanilla planifolia HOM05D000724 ORTHO05D000755 6.2e-13 77.0 96 45.8
MSTRG.13269 Avicennia marina HOM05D000724 ORTHO05D000755 3.8e-10 67.8 105 38.1
Lj1A1162T42 Lonicera japonica HOM05D000724 ORTHO05D000755 8.4e-10 66.6 105 37.1
Nitab4.5_0001298g0010 Nicotiana tabacum HOM05D000724 ORTHO05D000755 1.4e-09 65.9 104 38.5
Sopen02g006800 Solanum pennellii HOM05D000724 ORTHO05D000755 1.4e-09 65.9 104 38.5
PGSC0003DMG400011810 Solanum tuberosum HOM05D000724 ORTHO05D000755 1.4e-09 65.9 104 38.5
MBI02_g11453_MAGBIO Magnolia biondii HOM05D000724 ORTHO05D000755 2.4e-09 65.1 104 37.5
MBI02_g31763_MAGBIO Magnolia biondii HOM05D000724 ORTHO05D000755 2.4e-09 65.1 104 37.5
Sed0012952 Sechium edule HOM05D000724 ORTHO05D000755 2.4e-09 65.1 104 37.5
Peaxi162Scf00267g00059 Petunia axillaris HOM05D000724 ORTHO05D000755 3.2e-09 64.7 104 37.5
MBI18_g10576_MAGBIO Magnolia biondii HOM05D000724 ORTHO05D000755 4.2e-09 64.3 104 37.5
Manes.14G122900 Manihot esculenta HOM05D000724 ORTHO05D000755 4.2e-09 64.3 105 37.1
Nn3g20228 Nelumbo nucifera HOM05D000724 ORTHO05D000755 4.2e-09 64.3 104 37.5
SalBow8G4875 Salvia bowleyana HOM05D000724 ORTHO05D000755 4.2e-09 64.3 104 36.5
TAR629G1570 Trochodendron aralioides HOM05D000724 ORTHO05D000755 4.2e-09 64.3 105 37.1
VMungo0251G0321 Vigna mungo HOM05D000724 ORTHO05D000755 4.2e-09 64.3 104 37.5
Lj6g0009288 Lotus japonicus HOM05D000724 ORTHO05D000755 5.4e-09 63.9 104 35.6
MD10G1253500 Malus domestica HOM05D000724 ORTHO05D000755 5.4e-09 63.9 104 36.5
Lalb_Chr20g0120041 Lupinus albus HOM05D000724 ORTHO05D000755 7.1e-09 63.5 104 36.5
Nitab4.5_0002301g0020 Nicotiana tabacum HOM05D000724 ORTHO05D000755 7.1e-09 63.5 104 37.5
Lalb_Chr18g0057951 Lupinus albus HOM05D000724 ORTHO05D000755 9.3e-09 63.2 104 35.6
Phvul.006G128600 Phaseolus vulgaris HOM05D000724 ORTHO05D000755 1.2e-08 62.8 104 35.6
Solyc02g024070.3 Solanum lycopersicum HOM05D000724 ORTHO05D000755 1.2e-08 62.8 104 37.5
MSTRG.7537 Avicennia marina HOM05D000724 ORTHO05D000755 1.6e-08 62.4 104 35.6
CARHR029900 Cardamine hirsuta HOM05D000724 ORTHO05D000755 1.6e-08 62.4 105 35.2
Eucgr.D00184 Eucalyptus grandis HOM05D000724 ORTHO05D000755 1.6e-08 62.4 105 36.2
TPR.G26326 Trifolium pratense HOM05D000724 ORTHO05D000755 1.6e-08 62.4 104 34.6
TAR627G0893 Trochodendron aralioides HOM05D000724 ORTHO05D000755 1.6e-08 62.4 104 35.6
VMungo0540G2330 Vigna mungo HOM05D000724 ORTHO05D000755 1.6e-08 62.4 104 35.6
CSS0009114 Camellia sinensis var. sinensis HOM05D000724 ORTHO05D000755 2.1e-08 62.0 104 36.5
ClCG01G025120 Citrullus lanatus HOM05D000724 ORTHO05D000755 2.1e-08 62.0 104 36.5
MELO3C007078.2 Cucumis melo HOM05D000724 ORTHO05D000755 2.1e-08 62.0 104 36.5
CsaV3_6G052310 Cucumis sativus L. HOM05D000724 ORTHO05D000755 2.1e-08 62.0 104 36.5
TWI73G0776 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 2.1e-08 62.0 104 34.6
arahy.Tifrunner.gnm1.ann1.29D948 Arachis hypogaea HOM05D000724 ORTHO05D000755 2.7e-08 61.6 104 35.6
DCAR_003857 Daucus carota HOM05D000724 ORTHO05D000755 2.7e-08 61.6 104 35.6
Prupe.4G090100 Prunus persica HOM05D000724 ORTHO05D000755 2.7e-08 61.6 104 35.6
Sed0006144 Sechium edule HOM05D000724 ORTHO05D000755 2.7e-08 61.6 104 35.6
Atru.chr10.853 Acer truncatum HOM05D000724 ORTHO05D000755 3.5e-08 61.2 104 34.6
arahy.Tifrunner.gnm1.ann1.97AX4B Arachis hypogaea HOM05D000724 ORTHO05D000755 3.5e-08 61.2 104 35.6
Glyma.05G166400 Glycine max HOM05D000724 ORTHO05D000755 3.5e-08 61.2 104 36.5
Glyma.08G124400 Glycine max HOM05D000724 ORTHO05D000755 3.5e-08 61.2 104 36.5
Glyma.15G129700 Glycine max HOM05D000724 ORTHO05D000755 3.5e-08 61.2 104 34.6
Lj4g0004271 Lotus japonicus HOM05D000724 ORTHO05D000755 3.5e-08 61.2 104 35.6
PGSC0003DMG400021125 Solanum tuberosum HOM05D000724 ORTHO05D000755 3.5e-08 61.2 105 36.2
CANSAT35G1395 Cannabis sativa HOM05D000724 ORTHO05D000755 4.6e-08 60.8 104 35.6
MELO3C002807.2 Cucumis melo HOM05D000724 ORTHO05D000755 4.6e-08 60.8 105 35.2
CsaV3_1G037340 Cucumis sativus L. HOM05D000724 ORTHO05D000755 4.6e-08 60.8 105 35.2
Glyma.09G023600 Glycine max HOM05D000724 ORTHO05D000755 4.6e-08 60.8 104 33.7
MD05G1273700 Malus domestica HOM05D000724 ORTHO05D000755 4.6e-08 60.8 104 35.6
Phvul.002G246800 Phaseolus vulgaris HOM05D000724 ORTHO05D000755 4.6e-08 60.8 104 36.5
GSVIVG01021625001 Vitis vinifera HOM05D000724 ORTHO05D000755 4.6e-08 60.8 104 35.6
Haze_05818 Corylus avellana HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 35.6
Os03g0640800 Oryza sativa ssp. japonica HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 34.6
Os12g0612700 Oryza sativa ssp. japonica HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 34.6
Potri.001G372300 Populus trichocarpa HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 35.6
Potri.011G098300 Populus trichocarpa HOM05D000724 ORTHO05D000755 6.0e-08 60.5 105 35.2
Sabra16G0244700 Salix brachista HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 35.6
SGA_v2.0_scaffold51G18652 Striga asiatica HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 33.7
Zm00001eb050660 Zea mays HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 34.6
Zm00001eb218730 Zea mays HOM05D000724 ORTHO05D000755 6.0e-08 60.5 104 34.6
Ca_00839_v3 Cicer arietinum L. HOM05D000724 ORTHO05D000755 7.9e-08 60.1 104 33.7
Sabra11G0084500 Salix brachista HOM05D000724 ORTHO05D000755 7.9e-08 60.1 105 35.2
Sabra11G0090600 Salix brachista HOM05D000724 ORTHO05D000755 7.9e-08 60.1 105 35.2
Cfa000821 Carpinus fangiana HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 35.6
CiPaw.09G115500 Carya illinoinensis HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 34.6
Manes.06G055000 Manihot esculenta HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 34.6
Medtr2g030130 Medicago truncatula HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 33.7
Rhsim02G0161200 Rhododendron simsii HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 33.7
Sed0025540 Sechium edule HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 34.6
Thecc.06G001600 Theobroma cacao HOM05D000724 ORTHO05D000755 1.0e-07 59.7 104 34.6
Actinidia32365 Actinidia chinensis HOM05D000724 ORTHO05D000755 1.3e-07 59.3 104 34.6
THA.LOC104798602 Tarenaya hassleriana HOM05D000724 ORTHO05D000755 1.3e-07 59.3 105 34.3
unitig_749.g13812 Utricularia gibba HOM05D000724 ORTHO05D000755 1.3e-07 59.3 85 37.6
Actinidia13484 Actinidia chinensis HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 34.6
Aa31LG10G6620 Aethionema arabicum HOM05D000724 ORTHO05D000755 1.8e-07 58.9 105 34.3
AL1G44520 Arabidopsis lyrata HOM05D000724 ORTHO05D000755 1.8e-07 58.9 105 36.2
AT1G30490 Arabidopsis thaliana HOM05D000724 ORTHO05D000755 1.8e-07 58.9 105 36.2
Gohir.A10G003800 Gossypium hirsutum HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 32.7
Gohir.D10G003800 Gossypium hirsutum HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 32.7
Gorai.011G004200 Gossypium raimondii HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 32.7
Lalb_Chr15g0088751 Lupinus albus HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 33.7
Psat1g167760 Pisum sativum HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 33.7
RcHm_v2.0_Chr5g0015931 Rosa chinensis HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 34.6
vmacro10974 Vaccinium macrocarpon HOM05D000724 ORTHO05D000755 1.8e-07 58.9 104 33.7
ClCG03G006280 Citrullus lanatus HOM05D000724 ORTHO05D000755 3.0e-07 58.2 105 33.3
Duzib192G0982 Durio zibethinus HOM05D000724 ORTHO05D000755 3.0e-07 58.2 104 33.7
Duzib235G0392 Durio zibethinus HOM05D000724 ORTHO05D000755 3.0e-07 58.2 104 32.7
Sed0012002 Sechium edule HOM05D000724 ORTHO05D000755 3.0e-07 58.2 104 34.6
Carub.0004s1640 Capsella rubella HOM05D000724 ORTHO05D000755 3.9e-07 57.8 105 35.2
COL.COLO4_26831 Corchorus olitorius HOM05D000724 ORTHO05D000755 3.9e-07 57.8 104 32.7
Sp4g16990 Schrenkiella parvula HOM05D000724 ORTHO05D000755 3.9e-07 57.8 105 35.2
TWI09G1143 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 3.9e-07 57.8 104 32.7
TWI53G2086 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 3.9e-07 57.8 105 32.4
Aqoxy1G01568 Aquilegia oxysepala HOM05D000724 ORTHO05D000755 5.1e-07 57.4 105 32.4
CDE05G0088 Ceratophyllum demersum HOM05D000724 ORTHO05D000755 5.1e-07 57.4 105 34.3
Dinv06445 Davidia involucrata HOM05D000724 ORTHO05D000755 5.1e-07 57.4 104 33.7
Thhalv10016241m.g Eutrema salsugineum HOM05D000724 ORTHO05D000755 5.1e-07 57.4 105 35.2
Sopen02g018990 Solanum pennellii HOM05D000724 ORTHO05D000755 5.1e-07 57.4 105 34.3
HPP92_013993 Vanilla planifolia HOM05D000724 ORTHO05D000755 5.1e-07 57.4 104 34.6
Actinidia31388 Actinidia chinensis HOM05D000724 ORTHO05D000755 6.7e-07 57.0 104 32.7
AL4G30700 Arabidopsis lyrata HOM05D000724 ORTHO05D000755 6.7e-07 57.0 105 34.3
CAN.G1520.1 Capsicum annuum HOM05D000724 ORTHO05D000755 6.7e-07 57.0 107 36.4
Ca_17850_v3 Cicer arietinum L. HOM05D000724 ORTHO05D000755 6.7e-07 57.0 106 35.8
DCAR_007844 Daucus carota HOM05D000724 ORTHO05D000755 6.7e-07 57.0 104 33.7
Dinv07811 Davidia involucrata HOM05D000724 ORTHO05D000755 6.7e-07 57.0 104 33.7
Oeu040085.1 Olea europaea HOM05D000724 ORTHO05D000755 6.7e-07 57.0 104 33.7
HPP92_012191 Vanilla planifolia HOM05D000724 ORTHO05D000755 6.7e-07 57.0 106 34.9
CARHR128870 Cardamine hirsuta HOM05D000724 ORTHO05D000755 8.7e-07 56.6 105 34.3
Cc09_g08040 Coffea canephora HOM05D000724 ORTHO05D000755 8.7e-07 56.6 104 34.6
Thhalv10006792m.g Eutrema salsugineum HOM05D000724 ORTHO05D000755 8.7e-07 56.6 105 32.4
Sp1g26330 Schrenkiella parvula HOM05D000724 ORTHO05D000755 8.7e-07 56.6 105 32.4
unitig_37.g12079 Utricularia gibba HOM05D000724 ORTHO05D000755 8.7e-07 56.6 111 34.2
Ciclev10014266m.g Citrus clementina HOM05D000724 ORTHO05D000755 1.1e-06 56.2 104 32.7
DCAR_003873 Daucus carota HOM05D000724 ORTHO05D011687 1.1e-06 56.2 70 41.4
Carub.0001s2871 Capsella rubella HOM05D000724 ORTHO05D000755 1.5e-06 55.8 105 35.2
DCAR_027865 Daucus carota HOM05D000724 ORTHO05D000755 1.5e-06 55.8 104 32.7
FvH4_3g10070 Fragaria vesca HOM05D000724 ORTHO05D000755 1.5e-06 55.8 104 33.7
FAN11G1058 Fragaria x ananassa HOM05D000724 ORTHO05D000755 1.5e-06 55.8 104 33.7
FAN16G2844 Fragaria x ananassa HOM05D000724 ORTHO05D000755 1.5e-06 55.8 104 33.7
FAN21G1031 Fragaria x ananassa HOM05D000724 ORTHO05D000755 1.5e-06 55.8 104 33.7
ATR0165G014 Amborella trichopoda HOM05D000724 ORTHO05D000755 1.9e-06 55.5 106 36.8
Migut.H01331 Erythranthe guttata HOM05D000724 ORTHO05D000755 1.9e-06 55.5 104 33.7
Oeu058478.1 Olea europaea HOM05D000724 ORTHO05D000755 1.9e-06 55.5 104 33.7
Zm00001eb136060 Zea mays HOM05D000724 ORTHO05D000755 1.9e-06 55.5 104 32.7
A05p10930 Brassica napus HOM05D000724 ORTHO05D000755 2.5e-06 55.1 105 33.3
C04p14030 Brassica napus HOM05D000724 ORTHO05D000755 2.5e-06 55.1 105 33.3
BolC4t22994H Brassica oleracea HOM05D000724 ORTHO05D000755 2.5e-06 55.1 105 33.3
BraA05t20039Z Brassica rapa HOM05D000724 ORTHO05D000755 2.5e-06 55.1 105 33.3
PSO675G0706 Papaver somniferum HOM05D000724 ORTHO05D000755 2.5e-06 55.1 105 33.3
Zm00001eb031670 Zea mays HOM05D000724 ORTHO05D000755 2.5e-06 55.1 104 32.7
QL05p061797 Quercus lobata HOM05D000724 ORTHO05D000755 3.3e-06 54.7 104 31.7
BcaB07g32660 Brassica carinata HOM05D000724 ORTHO05D000755 4.3e-06 54.3 105 32.4
BcaB07g32684 Brassica carinata HOM05D000724 ORTHO05D000755 4.3e-06 54.3 105 32.4
A09p35970 Brassica napus HOM05D000724 ORTHO05D000755 4.3e-06 54.3 105 32.4
C05p29490 Brassica napus HOM05D000724 ORTHO05D000755 4.3e-06 54.3 105 32.4
BolC5t31679H Brassica oleracea HOM05D000724 ORTHO05D000755 4.3e-06 54.3 105 32.4
BraA09t39121Z Brassica rapa HOM05D000724 ORTHO05D000755 4.3e-06 54.3 105 32.4
CiPaw.10G085700 Carya illinoinensis HOM05D000724 ORTHO05D000755 4.3e-06 54.3 104 32.7
Migut.M01891 Erythranthe guttata HOM05D000724 ORTHO05D000755 4.3e-06 54.3 104 31.7
unitig_899.g14919 Utricularia gibba HOM05D000724 ORTHO05D000755 4.3e-06 54.3 76 39.5
PSO541G2198 Papaver somniferum HOM05D000724 ORTHO05D000755 7.4e-06 53.5 105 32.4


User provided reference genes

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