Gene: AT1G30490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G30490
  • Transcript Identifier AT1G30490.1
  • Gene Type Coding gene
  • Location Chr1 : 10796328-10800744 : negative

Gene Family Information

  • ID HOM05D000724
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G30490.1
  • symbol PHV
  • Alias ATHB9
  • full_name PHAVOLUTA
  • uniprot B2CUY2

Descriptions

  • Description Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
  • Computational description PHAVOLUTA (PHV); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT2G34710.1); Has 3472 Blast hits to 3351 proteins in 286 species: Archae - 0; Bacteria - 32; Metazoa - 920; Fungi - 121; Plants - 2372; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0080060
IGI
Gene Ontologyintegument development1
GO:0009880
IGI
Gene Ontologyembryonic pattern specification2
GO:0010072
IMP
Gene Ontologyprimary shoot apical meristem specification3
GO:0010014
IMP
Gene Ontologymeristem initiation3
GO:0009944
IMP
Gene Ontologypolarity specification of adaxial/abaxial axis3
GO:0009855
IMP
Gene Ontologydetermination of bilateral symmetry3
GO:0009943
IMP
Gene Ontologyadaxial/abaxial axis specification4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity5
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
ISS
Gene OntologyDNA binding4
GO:0003677
IEA
InterProDNA binding
GO:0008289
IEA
Gene Ontologylipid binding
GO:0008289
IEA
InterProlipid binding
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023393 START-like domain superfamily
IPR002913 START domain
IPR001356 Homeobox domain
IPR044830 Class III homeodomain-leucine zipper family
IPR013978 MEKHLA
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.2 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP III)