Gene: Carub.0001s2871

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2871
  • Transcript Identifier Carub.0001s2871.1
  • Gene Type Coding gene
  • Location scaffold_1 : 10556803-10561426 : negative

Gene Family Information

  • ID HOM05D000724
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2871.v1.1
  • pacid 39227161
  • synonym Carubv10008304m.g

Descriptions

  • Description PTHR24326//PTHR24326:SF191 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080060
ISO
PLAZA Integrative Orthologyintegument development AT1G30490
GO:0009880
ISO
PLAZA Integrative Orthologyembryonic pattern specification AT1G30490
GO:0010072
ISO
PLAZA Integrative Orthologyprimary shoot apical meristem specification AT1G30490
GO:0009944
ISO
PLAZA Integrative Orthologypolarity specification of adaxial/abaxial axis AT1G30490
GO:0009943
ISO
PLAZA Integrative Orthologyadaxial/abaxial axis specification AT1G30490
GO:0009855
ISO
PLAZA Integrative Orthologydetermination of bilateral symmetry AT1G30490
GO:0010014
ISO
PLAZA Integrative Orthologymeristem initiation AT1G30490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0008289
IEA
InterProlipid binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G30490
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G30490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044830 Class III homeodomain-leucine zipper family
IPR013978 MEKHLA
IPR002913 START domain
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR023393 START-like domain superfamily
Mapman id Description
15.5.3.2 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP III)