Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 6.3e-260 900.2 439 100.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 7.4e-35 152.5 431 30.9
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.2e-32 145.2 364 31.0
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 2.6e-32 144.1 422 29.4
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 3.4e-32 143.7 424 29.2
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 1.7e-31 141.4 454 29.1
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 3.2e-30 137.1 252 37.3
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 4.2e-30 136.7 418 28.9
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 5.5e-30 136.3 436 28.9
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 3.9e-28 130.2 227 38.8
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 5.1e-28 129.8 448 27.0
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 1.1e-27 128.6 406 27.8
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.5e-27 127.5 376 29.3
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 2.5e-27 127.5 230 35.7
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.3e-26 125.2 192 42.7
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.3e-26 125.2 430 27.9
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.3e-26 125.2 403 26.3
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.2e-26 124.4 413 28.3
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 2.2e-26 124.4 457 27.4
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 2.8e-26 124.0 424 27.4
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 3.7e-26 123.6 424 29.0
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 3.7e-26 123.6 431 27.6
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 4.8e-26 123.2 409 28.1
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 2.4e-25 120.9 230 34.8
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 3.1e-25 120.6 440 28.0
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 4.1e-25 120.2 230 35.2
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 4.1e-25 120.2 414 27.3
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 2.0e-24 117.9 230 36.1
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.7e-23 114.8 229 36.2
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 8.5e-23 112.5 420 27.4
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 1.9e-22 111.3 429 28.7
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 3.2e-22 110.5 236 34.3
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 4.2e-22 110.2 273 35.2
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 5.5e-22 109.8 258 34.5
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.2e-21 108.6 225 34.7
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.6e-21 108.2 240 33.3
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 2.1e-21 107.8 414 27.5
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 2.1e-21 107.8 390 27.7
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.8e-20 104.8 258 34.1
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 3.0e-20 104.0 407 26.0
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 6.7e-20 102.8 429 25.4
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.1e-19 102.1 435 24.4
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.1e-19 102.1 412 26.5
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.5e-19 101.7 393 24.9
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 5.7e-19 99.8 430 24.9
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 7.4e-19 99.4 412 26.2
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 7.4e-19 99.4 306 30.1
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 9.7e-19 99.0 232 32.3
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 9.7e-19 99.0 458 25.5
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 9.7e-19 99.0 217 32.7
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.7e-18 98.2 412 26.2
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.1e-17 95.5 224 34.4
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 7.0e-17 92.8 214 29.0
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.6e-16 91.7 414 24.2
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 2.0e-16 91.3 406 24.9
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.6e-16 90.9 219 33.8
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 1.3e-15 88.6 380 26.3
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 1.3e-15 88.6 122 42.6
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 1.3e-15 88.6 409 24.2
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.3e-15 88.6 427 25.5
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.9e-15 87.4 408 25.0
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.1e-14 85.5 402 25.4
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 3.6e-13 80.5 345 26.1
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 8.0e-13 79.3 177 35.6
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 1.5e-11 75.1 112 42.0
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 2.2e-10 71.2 108 41.7
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 2.2e-10 71.2 356 25.3
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.8e-09 68.2 454 21.8
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 1.8e-09 68.2 172 32.0
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 3.1e-09 67.4 93 40.9
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 4.1e-09 67.0 284 27.5
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 7.0e-09 66.2 100 37.0
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 9.1e-09 65.9 244 28.3
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 2.7e-08 64.3 257 26.5
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 3.5e-08 63.9 91 40.7
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.0e-07 62.4 232 26.7
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.0e-07 62.4 106 39.6
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.3e-07 62.0 85 38.8
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 1.7e-07 61.6 92 37.0
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 2.2e-07 61.2 356 22.2
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 2.9e-07 60.8 117 36.8
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 6.5e-07 59.7 96 38.5
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 2.5e-06 57.8 167 27.5
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 7.2e-06 56.2 80 35.0
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 9.4e-06 55.8 95 31.6
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 9.4e-06 55.8 98 33.7


User provided reference genes

Program Settings