Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 3.3e-141 505.0 248 100.0
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 6.3e-140 500.7 248 99.2
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 2.3e-89 332.8 227 71.8
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 4.7e-87 325.1 246 67.1
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 6.1e-87 324.7 235 68.9
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.4e-86 323.6 235 68.5
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 3.1e-86 322.4 224 69.6
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.5e-85 320.1 229 69.4
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 5.8e-85 318.2 227 68.7
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 7.5e-85 317.8 244 66.8
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 1.3e-84 317.0 224 68.3
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 2.2e-84 316.2 232 64.7
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 2.9e-84 315.8 228 67.1
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 4.9e-84 315.1 221 69.7
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 1.1e-83 313.9 240 65.4
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 1.1e-83 313.9 226 68.6
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 2.4e-83 312.8 221 67.9
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 4.1e-83 312.0 243 64.6
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 4.1e-83 312.0 228 67.1
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 7.0e-83 311.2 232 67.2
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 1.2e-82 310.5 239 64.4
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 2.0e-82 309.7 244 63.5
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 2.7e-82 309.3 224 67.9
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 2.3e-81 306.2 224 67.0
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 3.0e-81 305.8 235 63.4
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 3.0e-81 305.8 235 64.3
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 3.9e-81 305.4 226 65.5
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.1e-80 303.9 226 65.0
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.1e-80 303.9 227 63.4
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 1.9e-80 303.1 221 68.3
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 2.5e-80 302.8 224 64.7
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 4.3e-80 302.0 235 63.0
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 2.1e-79 299.7 224 65.6
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 2.8e-79 299.3 234 62.4
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 3.6e-79 298.9 240 60.8
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 1.4e-78 297.0 224 63.8
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 2.3e-78 296.2 224 65.2
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 2.3e-78 296.2 222 64.4
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 3.1e-78 295.8 222 64.4
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 5.2e-78 295.0 224 67.0
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 2.6e-77 292.7 224 64.7
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 1.7e-76 290.0 221 64.3
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 2.9e-76 289.3 240 59.6
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 8.3e-76 287.7 224 63.8
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 1.1e-75 287.3 240 60.4
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 3.2e-75 285.8 253 58.1
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 3.2e-75 285.8 241 59.8
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 9.2e-75 284.3 234 59.8
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 1.2e-74 283.9 240 58.3
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 3.5e-74 282.3 245 57.6
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 4.6e-74 282.0 240 57.9
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 7.8e-74 281.2 227 59.5
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 7.8e-74 281.2 236 61.9
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 1.3e-73 280.4 230 60.4
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 1.7e-73 280.0 230 61.3
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 2.3e-73 279.6 246 56.5
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 3.0e-73 279.3 230 61.3
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 3.0e-73 279.3 233 59.2
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 8.6e-73 277.7 246 56.1
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 1.1e-72 277.3 246 58.1
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 1.5e-72 276.9 292 51.0
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 1.9e-72 276.6 230 57.8
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 2.5e-72 276.2 237 61.6
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 3.3e-72 275.8 226 61.5
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 5.6e-72 275.0 246 56.9
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 7.3e-72 274.6 227 58.6
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 9.5e-72 274.2 227 59.0
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.6e-71 273.5 213 66.7
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 2.8e-71 272.7 233 57.1
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 2.8e-71 272.7 262 56.9
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 3.6e-71 272.3 224 60.3
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 4.7e-71 271.9 229 58.1
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 4.7e-71 271.9 227 58.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 6.8e-70 268.1 228 60.5
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 2.0e-69 266.5 219 60.3
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.4e-69 265.8 229 57.2
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 1.7e-68 263.5 219 59.4
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 2.9e-68 262.7 235 59.1
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 3.2e-67 259.2 227 60.8
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 3.2e-67 259.2 229 55.5
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 5.4e-67 258.5 222 59.0
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 7.8e-66 254.6 222 56.8
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 7.8e-66 254.6 222 57.2
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 7.8e-66 254.6 213 61.0
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 6.6e-65 251.5 242 53.7
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 1.2e-63 247.3 222 60.8
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.8e-62 243.4 213 57.7
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.8e-62 243.4 213 57.7
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 2.4e-62 243.0 210 56.2
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 5.8e-61 238.4 230 56.1
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 7.6e-61 238.0 217 56.7
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 3.8e-60 235.7 204 58.3
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 2.1e-58 229.9 183 64.5
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 2.7e-58 229.6 188 60.1
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.3e-57 227.3 221 57.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.3e-57 227.3 221 57.0
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.3e-57 226.5 239 51.5
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 8.7e-57 224.6 186 59.7
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 9.6e-56 221.1 265 47.9
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 4.7e-55 218.8 177 60.5
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 3.1e-54 216.1 195 56.4
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 7.1e-51 204.9 275 45.8
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.9e-48 196.8 146 62.3
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 5.6e-48 195.3 150 61.3
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 2.6e-45 186.4 159 60.4
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 4.5e-45 185.7 148 60.1
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-43 180.3 230 47.4
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 1.6e-42 177.2 165 58.8
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 7.9e-42 174.9 216 47.7
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 2.1e-39 166.8 121 66.1
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 2.0e-37 160.2 170 51.8
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 2.6e-37 159.8 144 57.6
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 3.8e-36 156.0 218 37.6
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 7.9e-34 148.3 119 63.0
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.5e-29 134.0 130 53.8
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 3.4e-29 132.9 223 34.5
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-27 127.9 146 50.7
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 1.2e-18 97.8 80 57.5
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 1.0e-17 94.7 102 45.1
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 1.4e-11 74.3 61 55.7
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 3.9e-09 66.2 43 69.8
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 1.5e-08 64.3 87 41.4


User provided reference genes

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